Salmo trutta (river trout): 115206406
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Entry
115206406 CDS
T08542
Symbol
atm
Name
(RefSeq) serine-protein kinase ATM isoform X1
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03440
Homologous recombination
stru04068
FoxO signaling pathway
stru04110
Cell cycle
stru04115
p53 signaling pathway
stru04210
Apoptosis
stru04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115206406 (atm)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
115206406 (atm)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115206406 (atm)
04210 Apoptosis
115206406 (atm)
04115 p53 signaling pathway
115206406 (atm)
04218 Cellular senescence
115206406 (atm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
stru01001
]
115206406 (atm)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stru03032
]
115206406 (atm)
03036 Chromosome and associated proteins [BR:
stru03036
]
115206406 (atm)
03400 DNA repair and recombination proteins [BR:
stru03400
]
115206406 (atm)
Enzymes [BR:
stru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
115206406 (atm)
Protein kinases [BR:
stru01001
]
Serine/threonine kinases: Other
PIKK family [OT]
115206406 (atm)
DNA replication proteins [BR:
stru03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
115206406 (atm)
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
115206406 (atm)
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
Check point factors
Other check point factors
115206406 (atm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
HEAT
HEAT_ATR
DUF3349
Motif
Other DBs
NCBI-GeneID:
115206406
NCBI-ProteinID:
XP_029629195
Ensembl:
ENSSTUG00000048910
LinkDB
All DBs
Position
13:68138232..68183952
Genome browser
AA seq
3086 aa
AA seq
DB search
MSLVLHELLVCCRALENDKATERKKEADRFRQLIRSPDTVEELDRTSGTRAAKSSKQLTW
NAVFRFLQKYLQKETELLQSGKANVSATTQANRQKKMQEISSLVKYFIRCANKRGPRLNC
GELLNHVMEVLQSSFSCSAYGEDYSSILLKNILSVRKYWCDITKQQWHNLLDLYCGLFTG
SSKAINRVLVSRIIHTVVKGCCLQTEGFSHTLFSFFSRALLNARQERHLAVVEHLISALN
VFLRSAAMNCRIRVCRLGEELLPSVLYVWTQMRPSTTLKEEIVEFFNLQLCVHHPKGSKT
QDTGAYAEDWVKWQSLLYNLYDALVSEISQIGSRGKYATGSRHIAVKENLMELTAEICHQ
LFSEDCNLQILEVTQAHLRATQRGSPHGTPSKRRRIELGWEVLRDHLQPHHSDFDIIPWL
QITSVLTSKYPSMVPGQELVPLLSVLCQLLGEQRRGDRGPYVLRCLREVARCQATHPERA
QSYRAELGRLWGRVWVLALRGVSSPQTEALSLALLSTILQGAFIPIDRELWKLFSGSACK
PSDAAALCLAQALLKCSVLKSLGTGWDHAGAVEGVGPPSLKENIMSWLLMKEQSEEAEES
SRPHPIICRDFPHNLIPRILVPLTLKDTRAGIMFLLGAKGLENAVMQDQAQVEVKGALSE
IESMYLQFSFDEMPSNLMVKVMVSSAGTQLTVVPSLKHKLEQGLLSVADHLLNCYSPDSQ
STPPECLVRCSSLLTGVLAGYVSTGLLTEEEACHSQLFLKAKALVQDFSEYISNVKVKMA
EDGTMTTLRSVMRLCTQCVKRGVKDSMSSVSCNLFMKIFPARLLTELAEICKLLLNSSCK
RGSVGIEEETTDEDWDMTRTQADQQEDIDLFDDGDGPQTSTSKGTHRQNVDPNDTQCGPD
AKSLLAEEHLAQQDLAILAGLEFLSLCVSAEFIHGLSFKPVEIRRKLLLLLEQIDCTKPL
HLNMYLVLLKKLPAEDTSLAAEDFDSLLRPLADLCSLYRQDQEICAAVLLGLLPSIRSLG
RTQDQQNDMRHVQGALLQVVSGFCILGRTGKCTAIVKVALIHCLLALLEADPCCKWAVLT
LREEELPVSVILPSHLSDSHHHVRMLAAMTVERLFLEMTPDSLEKRKMLPLKCQQTAFEN
VYLKAQEGMRVQKNSSPEDLSDETFNRKATLLKSVSVVLCCSPVCEKQSLFALFQSYKEN
NIEEPLIKKVLGSVSRALGYRSVEGFVSSHLDYLVAEWLGQHGYTLESFPYTLLNHATLK
DFYSSSYQVLIPHLVFLDDFKQVKSISTHLGKDWKKLLANCFPKIMVNILPYFAVSGQDA
QVAQQREKAHRVYDLLKDSNCLGKPQIDSLIHSNLSDIVVELLMTLYEGAATEEGGRGDL
RRFIGELDPAPNPPYFSSYVIKATLDYLSSCHSANLKSLVAILSKTPISIQRILLAVCQK
AAEMINAYERHRILLMYHLFVSLLLKEVKDGLGGAWAFVLRDIIYTLIHHINSRPAQLDE
VSGRSFSLCCDLLTSVCRTAVQFCDDAVESHLQVIVGTLTAQVTNQLAISQQVLSLLKFL
VVESQDKLKSAIQKLEPFPDRPEFRELRAVQHTLKYSTGKFTLRQEIAHFLSVASCDSLP
LTRLEGLKDLRRQLHNNKSQIRPLLRECLVDPAESVLVLLVLNLLQLCKLAANHPGGRDI
LEAAGSCLGELGPVDFSTITLLHGKDQLSARAVSLFPQVEPQWLYIILNCINNALTHHCI
EVRQAAVQSLKGILATQAGADFWEIHKDNRDPMLAYLNPFRSTKKKVVGMSEEVSLVARE
RLESQDLWVPEAGGHKVWLKTLCMVLLDSGGVRSEALLLSRPMCLVKTDFCQRVLPLIIH
DILLGDSDGSWRKLLSTHIQDFFTSRARASSRSTTPLPSDSAGESDISNQGPLDKASLRT
MLSVINYLRQQQRPLESDSNLCGTVCHSNFWLELNYLEVARAAQSCSAHFTALLYSEIYV
DKIKTNMEENRRNPVRASRRITFDESSQNFTISSLTEESVKDTGISLQDLLIEVYRSIGE
PDSLYGCGGGKMTSALTRIRTYEHEAMWGKALTSYDLHSNLPDGTRQVGIVEGLQNIGLS
SILATYLQGLESEGVEWGAELRELRFQAAWRNMQWDCDLSERNEKLNPGFNESVFCSLQA
LRDKEFSTFDQTLKYARGNEVEELCRGSLEAVSSLYPALRNLQRISELESIRQLFSKPLT
EVGLAEVCSHWQQHSQLLVDSDFTLVEPILALRSVAQETLISQERDPEKNKYLSTFLTSH
LMELCQLARAAGNTQLAERAVFQMKQHGGGGGRGSTASSWQLEEAQVFWAKGEQGLALGL
LRQMIHTLEEQVLFNPALVPVFTECLRLCGNWLAETCLESPGVILEKYLERAVEVIEGHA
IGSDTKLQSQRTQAFLSLARFSDAQYQGIHNYMKSSEFENKQALLVKAKEEVDLMRERKV
GTNRYTEKVRRELELDERALSNLQADRRRFLCKAVENYIHCLEQGEEHDTWVFRLASLWL
ENADVKAVNDMMKGGVNRIPSYKFLPLMYQLAARMGTKMSATVAEDVGFHGVLNELIFLS
CLEHPHHTLFIILALVNANKDESLSRSRLSKSTPRHSSQLDLERSEVSQRIMNKIRKKRA
QMIRGIEVLCDAYITLAYMDASRHKTEKKAILIPSDQPIMQIKNLDDVIIPTMEIKVDPS
GKYDNLVTIKSFKPHFHLAGGVNLPKIIECVGSDGKSRRQLVKGQDDLRQDAVMQQVFHM
CSMLLQRNTETRKRKLNIRRYKVVPFSKRSGVLEWCSGTIPIGDFLIDPQKGAHTRFCPQ
DWTSITCRKKMMESQRLGSSGKTQAFSEVCQNFQPVFRYFCMERFLDPAVWLEKRLAYTR
SVATSSIVGYIVGLGDRHIQNILIDEQTAELVHIDLGVAFEQGKILPTPETVPFRLSRDI
VDGMGITGVEGVFRRCCEKTMEVMRSSQEALVTIVEVLLYDPLFDWTMNPLKAFYLQQQH
DEQAELQATLNSTLGGDILEAHPKSSSDSQSFNKVAERVLLRLQEKLKGVEDGRVLSVGG
QVNLLIQQAMDPNNLSRLFPGWQAWV
NT seq
9261 nt
NT seq
+upstream
nt +downstream
nt
atgagcttggtccttcacgagctgctggtctgctgcagagctttagagaatgacaaagca
acggaaagaaagaaagaggctgatcgcttcagacagctcatccggtctcctgacacagtg
gaggagctggatcgcacttctggaaccagagctgctaaaagttccaagcagctcacctgg
aatgcagtcttcaggtttctgcagaagtatctgcagaaagagactgagctgctccagtca
gggaaagccaacgtgtcagccaccacacaggctaaccgtcagaagaagatgcaggagatc
agcagcctggtcaaatacttcatccgctgtgccaacaagagagggcctcggctgaattgt
ggcgagctcctgaatcatgtgatggaggtgctgcagagctcattcagctgctcggcctat
ggggaggactacagcagcatcctgctcaagaacatcctgtctgtccgcaagtactggtgt
gacatcaccaagcagcagtggcacaatttgctggatctgtattgtggccttttcactggt
tcctccaaggccataaatcgtgtgcttgtgagcaggatcatccacactgtagtcaagggc
tgctgtctgcagactgagggcttcagccatacactcttcagtttcttctccagagcactt
ctcaatgccaggcaggagagacacttggcagtggtggagcacttgatctctgctctgaac
gtcttcctgaggtcagctgccatgaactgccgtatcagggtgtgtcggctgggtgaggag
ctcctgccctctgtgctctatgtgtggacacagatgaggcccagcaccactctcaaagag
gagatagtggagttcttcaacctgcagctctgtgtacatcatcccaaaggatcaaagaca
caagacacaggagcctacgctgaggactgggtcaaatggcagagtctactctataacctg
tacgatgccttggtgagtgagatcagccagattgggagccgggggaaatatgccacaggg
tcgcgccacatcgctgtgaaggagaaccttatggagctaactgcagaaatctgccatcag
ctctttagcgaggattgtaacctccagattctggaggtgactcaggcccacctcagagcc
acccagagaggcagtccacacggcacgcccagcaaacgtagacgcatcgagctgggctgg
gaggttctccgagaccacctgcagccacaccatagtgactttgacatcataccatggtta
cagatcacatcagtgttgacctctaagtacccctccatggtgcctggccaggagctggtt
cctctgctgtccgtcctgtgccagctgctgggggagcagcggcggggtgacagggggccc
tacgtgctgcgctgcctgagggaggtggctcgctgccaggccacacacccagagagggcc
caatcctacagggctgaactgggcaggctgtggggccgtgtctgggtcctggctctacgg
ggggtcagctccccccagactgaggccctcagtctggccctgctgtccacaatcctccag
ggagccttcattcccattgacagagagctctggaagctcttctctggctcagcctgcaag
ccctctgatgctgctgctctgtgtttggcccaggcccttctcaagtgttctgttcttaag
agcctgggcactgggtgggaccatgcaggggccgtggagggggtcgggccacccagcctc
aaggagaacatcatgagctggctgctgatgaaggaacaaagtgaagaggcagaggagagc
tcaagaccacaccccatcatctgcagggattttcctcataacctaatccccagaatcctt
gtgcctttgaccctcaaagacacccgagctggcattatgtttctccttggggcaaaggga
cttgagaatgctgtgatgcaagatcaagcacaagtggaagttaaaggtgccctgagtgag
attgagagcatgtacctgcagttcagctttgacgagatgccctctaacctcatggtgaaa
gtgatggtgtcctcagccggcactcagctcactgttgtccccagccttaaacacaagctg
gagcagggcctcttgtctgtggctgaccacctactcaactgctactccccagattctcag
tccacgccaccagaatgcctggttcgttgttcaagtctccttactggcgttttagcagga
tatgtctctactggtctcctgactgaggaagaagcctgccattcccaactcttcctaaag
gccaaggcactggtccaggattttagtgagtacatatctaatgtgaaggtgaagatggca
gaggatgggacaatgaccacactcaggtctgtcatgcgactgtgcacacagtgtgtcaaa
agaggggttaaggacagtatgagctctgtctcttgcaacttgttcatgaagattttccct
gcgagacttttgactgaactggcagaaatatgcaaactgttgctgaacagctcctgtaag
agaggtagtgtggggattgaggaggagaccaccgatgaggactgggacatgacgaggaca
caagctgaccagcaggaggacattgacctgtttgatgatggagacggaccacagaccagc
acatctaaggggactcacagacagaatgtggaccccaatgacacccagtgtggtcctgat
gctaaaagcctcctggctgaggagcatttggcccagcaggatttagccatcttggccggt
ctggagttcctgtccctgtgtgtatcggctgagtttatccacgggctctctttcaaacca
gtggagatccgccgcaagttactactgctgctggagcagatagactgcaccaagccacta
cacctcaacatgtacctggtccttctgaagaaactacctgctgaggacacatcgctggca
gctgaagactttgactcactcctcagacctctggcggatctttgctcattgtaccgccag
gaccaggagatctgtgctgcagtgctgctgggtctgctaccgtctatccgtagtctgggc
cgtactcaggaccagcagaatgacatgagacacgtccagggagctctgctccaagtggtc
tctggattctgcattttgggcagaacggggaaatgcacagcaattgtaaaggtggcatta
attcactgtctactggctctactggaggctgacccttgctgtaagtgggcggtccttacc
ctgagggaggaggagcttccagtgtccgtcatcctcccgtcccacctgtctgactctcac
catcacgtacgaatgcttgcagccatgacagtggagaggctgtttttggagatgacaccg
gacagcttggagaagagaaagatgcttcctctgaaatgccagcagacagcctttgagaac
gtctacctgaaagcccaagaagggatgagggtccagaagaacagctctcctgaagacctg
agtgacgagacctttaaccgcaaggccacgctgctgaagagtgtgtcggtggtgctgtgc
tgcagccccgtctgtgagaaacagtccctcttcgccctcttccagtcctacaaggagaac
aacatagaggagccgctcatcaaaaaggtcctgggcagtgtgtccagagcgctgggctac
aggagtgtggaggggtttgtcagctctcacctggattacctggtggcagagtggctgggc
cagcatggctacactctggagtccttcccatacactctgctcaaccacgccactctcaag
gacttctacagctcctcctatcaggtccttatcccacacctggtcttcctggatgacttt
aagcaggtgaagtccatcagcactcacctgggtaaggactggaagaagctgctggccaac
tgcttccctaagatcatggttaacatcctgccctactttgccgtgtcgggccaggacgcc
caagtggcccagcagagagagaaggcccacagggtctatgacctactcaaggacagcaac
tgcctgggcaaaccgcaaatcgacagcctgattcacagtaacctgtcagacattgtggtg
gagctgttgatgaccctgtatgaaggggctgctactgaggaggggggcagaggggacctg
agaaggttcataggggaactggacccagccccaaacccaccctatttcagctcctatgtc
ataaaagccacactggactatctcagctcgtgtcacagtgccaatctcaagtccctggtg
gccattttatccaagactccgatctccatccagaggatcctactggccgtgtgtcagaag
gcagctgagatgatcaatgcctacgaaaggcaccgcatcctgctgatgtaccacctgttt
gtcagcctgctgctcaaggaggtcaaggacggcctggggggagcctgggcctttgtcctc
cgagacatcatttacacactcatccaccacatcaacagcaggccggcccagttggacgag
gtgtccggccgtagtttctccctgtgttgtgacctactgacctctgtgtgtcgcacggcc
gtgcaattctgtgatgacgctgtggagagccacctacaggtcattgttggtactctcact
gcccaggtgacaaaccaacttgctatttcacagcaggtgctcagtctgttgaagttcctg
gtcgtagagagtcaggacaagctaaagagtgccatccagaagttagaacctttcccagac
cgacctgagttcagagagctgagggccgtgcagcacacactgaagtacagcacagggaaa
ttcactctcagacaggagatagcccacttcctgtctgtggcttcctgtgactccctgcct
ctgactagactggaggggctgaaggacctgaggagacagctccacaacaacaagagccag
atcagaccgctgctgagagagtgcctcgtggaccctgcagagagtgtgttggtgctgctg
gtccttaacctactacagctctgtaagctagcagccaatcaccctggaggaagagacatc
ttagaggctgcagggagctgtctgggagagctggggcctgtggatttctccaccatcaca
ctgctccatgggaaggaccagctcagtgccagagctgtatcactcttccctcaagtggaa
ccacagtggctctacatcatcctgaactgcatcaacaatgccctcactcaccactgtatt
gaggtgaggcaagctgctgtccagagtctgaagggcatcttggccactcaggctggagct
gacttctgggagatccataaagacaaccgtgaccccatgctggcttacctcaaccctttt
agatctaccaagaagaaggtggtcgggatgagtgaggaggtgagcttggtggctagggag
cggctggagagccaggacctgtgggtgcctgaggctggcggccataaggtctggttgaag
acgctctgcatggttctgctggacagtggaggggtcaggagtgaggctctgctgctttcc
cggcccatgtgtctggtgaaaacagacttctgccagagggtgctgccgctcatcatccat
gacatcctgctgggggactctgacggctcctggaggaagctcctctccacacacatccag
gactttttcaccagtcgtgcccgggcctccagccgctccaccactcctctcccctcagac
tctgcaggagagtcggacatctccaaccagggtccgttggataaggcctctctgcgcacc
atgctctctgtcattaactatctgaggcagcaacaaagacctctagaatctgatagtaac
ttgtgtggtacggtgtgccactctaacttctggttggagctgaactacctggaggtggcc
agggcggcccagtcctgctcagcacacttcacagccctgctctactctgagatctacgta
gacaagatcaagactaacatggaggagaaccgcagaaatccggtcagagcgtcgcgcaga
atcacatttgatgagagcagtcagaacttcaccatctccagtctgacagaggagagtgtg
aaagacactggtatcagtctacaggacctactgattgaggtgtatcgtagtattggggag
ccagacagtctgtatgggtgtggaggtgggaagatgaccagcgctctcaccaggattcgg
acctatgagcatgaggcgatgtggggaaaggctctgacctcctacgacctccactccaat
cttcctgatggcacacggcaagtgggcattgtggagggtctgcagaacattggtctgagc
agtatcctggccacctacctgcagggtctggagagtgagggggtggagtggggggcggag
ctaagggagctcaggtttcaggctgcctggaggaacatgcagtgggactgtgacctatca
gagaggaatgagaaattgaaccctggcttcaacgagtcagtgttctgctccctgcaggct
ttgagagacaaagaattttccacattcgatcaaactcttaaatatgccaggggcaatgag
gtggaggaactgtgcagaggcagtctggaggcagtgtcctctctctaccctgctctacgg
aacctccagaggatcagtgagctagagagcatccgacaactcttctccaagcccctgacc
gaggtaggcctggccgaggtgtgttcccattggcagcagcactcccagctgctggtggac
agtgactttacgctggtggagcccatcctggccctgcgctccgtggcccaggagacccta
atctcccaggagagagaccctgaaaagaacaagtacctcagcactttcctcacctcccac
ctcatggagctctgccaactggcccgcgccgcaggaaacacacagctggcagagcgggcg
gttttccagatgaagcagcatggcggaggaggggggcggggctccacagcgtcgtcatgg
cagctggaggaggcccaggtgttttgggcgaagggagagcagggtcttgctctggggcta
ctgagacagatgatccacactctggaggagcaggttttgtttaaccctgccctggtgccg
gtgttcacggagtgcctgaggctgtgtgggaactggctggcagagacgtgcctggagagc
cctggggtcatcctggagaagtacctggagagggcagtggaggtgatcgagggccatgcg
ataggttcagacaccaagctgcagagccagaggacacaggccttcctgtccctggccagg
ttctcagatgcccagtaccagggcattcataactacatgaagtcatctgagtttgagaac
aaacaggctctgctggtgaaggccaaggaggaggtggacttgatgagggagcgcaaggtc
ggcaccaacaggtacacagagaaggtgcggagggagttggagctggatgagagggctctg
tccaacctgcaggctgacagaaggaggttcctgtgtaaggctgtggagaactacatccat
tgtctggagcagggtgaggagcacgacacctgggtgttccgcctggcctcactgtggctg
gagaacgctgacgtcaaggcagtcaacgacatgatgaagggaggtgtgaacaggatcccg
tcctataagtttctgcctctcatgtaccagctggctgcccgcatggggaccaaaatgtct
gctacagtggcagaggatgtgggcttccatggtgttctcaatgagctgatcttcctgtcg
tgtctggagcaccctcaccacaccctcttcatcatcctggctctggtcaacgctaacaag
gacgagagcctctcccgcagccgcctgtccaagagcaccccgcgccattcctcccaactg
gacctggagcggtcagaggtgtcccagaggataatgaacaagatcaggaagaagagagcc
cagatgatcagaggcatagaggtcctctgtgatgcctacatcactctggcctacatggac
gccagtcgacacaagacagagaaaaaagccatcctcatcccctctgaccagcccatcatg
cagataaagaacctagatgatgtcatcattcctacaatggagatcaaggtggacccctcg
ggtaaatatgacaacctggtgaccatcaagtccttcaagcctcactttcacctggccgga
ggggtcaatctgcccaagatcattgagtgtgtgggatcagacgggaagagcagacgacaa
ctggtcaagggccaggatgacctgcggcaggatgctgtgatgcagcaggtgttccacatg
tgttctatgctgctgcagcgcaacaccgagacacgcaagaggaaactcaacatccgacgc
tacaaggtggtgcccttctccaagcgtagtggggttctagagtggtgctcggggaccatc
cctataggggatttcctcatagacccccaaaagggtgctcacacacgcttctgcccccaa
gactggaccagcataacctgccggaaaaagatgatggagtctcagaggcttggttccagt
gggaagacccaggctttcagtgaggtgtgtcagaacttccagcctgtcttccggtacttc
tgcatggagcgattcctggacccggcagtgtggctggaaaaacggctggcctacactcgc
agtgtggccacttcctccatcgtgggctacattgttggactgggggacaggcacattcag
aacatccttatagacgaacagacagctgaactggtgcatattgatttgggtgtagcgttt
gaacagggcaagattctcccaactcctgagactgttcccttcaggctctccagagatatt
gtggatgggatgggcataacaggggtggagggcgttttcagaagatgctgtgagaagacc
atggaggtcatgaggagttctcaagaggccttggtgactattgtagaggtactgctgtac
gaccctctgtttgactggaccatgaaccctctcaaggccttctacctgcagcagcagcat
gatgagcaggctgagctccaggccacgctcaactctacactggggggagacatcctggag
gcccaccccaagtccagcagtgatagccagagcttcaacaaggtggcggagcgcgtgctg
ctgcgcctgcaggagaagctgaagggggtggaggatggcagggtgctcagtgtaggaggg
caggtcaacctcctcatccagcaggccatggaccctaacaatctcagccgcctcttcccc
ggctggcaggcctgggtctag
DBGET
integrated database retrieval system
