Salmo trutta (river trout): 115206516
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Entry
115206516 CDS
T08542
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115206516
03012 Translation factors [BR:
stru03012
]
115206516
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115206516
mRNA cycle factors
Stress granule specific factors
115206516
Translation factors [BR:
stru03012
]
Eukaryotic type
Initiation factors
eIF-4
115206516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
Motif
Other DBs
NCBI-GeneID:
115206516
NCBI-ProteinID:
XP_029629452
Ensembl:
ENSSTUG00000002548
LinkDB
All DBs
Position
13:complement(74290933..74354799)
Genome browser
AA seq
1741 aa
AA seq
DB search
MNKAPQTITRPHPAPSPGLQLPTFPPGQPPSVVFATPPSQMNPAPQPRQFAPVPRALHQQ
GGFRSLQSYYSRPSLPSNAPRVPPSSTPRPVAPTHVYQPGQQMMMMIPSQQIPFPNQQGP
AYFIPGQYRSTYVATPQQYPGTPGFYPGTSPAEYGTYAGAYYPAQQQYTPSVPAAPVIMN
PPSQQQQLSPQQQIQPKRERKQVQIIIRDPNQGGKDITEEIMSGGTRSGTTPTPPQVSDD
SSESSGSEGPAVAQANGENVTPVVVRPDDRGKPAATLITGPPALSKTPELVKTAPAPTEV
KLPDTDSKSPSLPQDLPTPPRVTTTLHTTAPGTPPPSTSPIADMDAPAPTAAPAPTAAPA
PTAAPAPTAAPAPTAAPAPTAAPAPTAAPAPTAAPAPTAPKVPAYPAPLPEPRPTPAAEE
QPSAAKEAREEVKEKEEIKEVTEAREVTTSSKPEPSLAPVTNPSSSTNGVSATQPLPEEE
PAALSITMPSPQAAEPPLDFPIAQPEELRLPNGLPLPSPQDPEKVSAESSECDLSPFAEP
EVAPLQREAPAPVAATATPDPVVQATVAPVVLAETASTTEVTPRQMEDEMDSPPSQRTTP
AGENSMQAAVSVPKKKRKMKDLNRKEAVGDLLDAFKEEQVVQSPPEQATPTSASDAEEPR
PAATPAVAEVDETWEEKEDKLDAENIEPNPGDLKYQYKEELCRPIDPEEKKRYDRDFLLG
FQFISAAMSKPEGLPQISDVVLDKANKAPLRQLDPSRLPGMNMGPDFTPSFANLGRPGMG
GGGGHRGGPPSGMSGGGPRRSQQGQRKEPRRIINISSSLTDDVKLNKAEDAWKPAVKKAA
SGQAAPEEESDDPEQAKTQELFKRVRSILNKLTPQMFQQLMKQVKELTIDTEERLKGVID
LIFEKAISEPNFSVAYANMCRCLMGLKVPTTDKLGVTVNFRKLLLNRCQKEFEKDKDDDV
VFDKKQKELDAAAMEEKDRLKAELEEAKDMARRRSLGNIKFIGELFKLKMLTEAIMHDCI
VKLLKNHDEESLECLCRLLSTIGKDLDFEKAKPRMDQYFVQMDKIIKEKKTSSRIRFMLQ
DVLDLRKNTWVPRRGEQGPKTIDQIHKEAELEEHREVLKVQQQLLNQNTRGGGGGRGGGG
GGGGGGGGGRDQGNRGGQHPQAGQRSQPQDEDWNTVPISTKSRPIDTSRLSKITKPGALD
FNNQLLAPQLGGKGMWGSWGKGSSGGTTGAKPAGEATPESGGRPATSTLNRFSALQPQQP
SSGPSQDSDRRVPLRNSSSRDRGSDRFERHDRGSNDRFDRRDDRDRNRPLVTKRSFSRET
EEHSREREHRGPSDPIRRVASMTDDPGSRDRARSKENVKREAVATPPTQTKPSLSEEELE
KKATAIIEEYLHINDMKEALQCVVEMNSTRLLFVFVRSGLESTLERSPIARERTGLLLHQ
LYKAGTLPTEQYYRGLQEILEVAEDMAIDIPHIWLYLAELITPMLHEGGIPMGPLFKEIS
KPLVPQGTAGVLLVQILTLLCRGMSRKKAGAMWREAGLSWKDFLPEDEDVNKFVTEKNVA
FTLGGGGDDETEKGSKKELSSEELNKQLDRLIQDKADNQRIYDWVEANLDETQISSNVFV
RAVMTAICQSAILCENPYKLDAKVITRRARLLHKYLKDEQKELQALYALQALMVELEQPA
NLLRMFFDTLYDEDVIKEEAFYKWESSKDPAEMQGKGVALKSVTAFFTWLREAEDEESDN
S
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaccacagactataacgcgaccccaccctgccccctcccccggactccag
ctacccaccttccctcctggacagcccccctctgttgtctttgccaccccaccttcacaa
atgaacccagcgccacagccccgacagttcgcccccgtgccccgtgctttacaccaacag
ggaggattcaggtcactgcagtcgtactacagccgtcccagtctgcccagcaatgccccc
cgggtgccccccagcagcacgccgaggcccgtggcgcccacacatgtctaccagccgggc
caacagatgatgatgatgatcccctcacagcagatccccttccccaaccaacagggcccc
gcctacttcatacccggacagtaccggtcaacgtacgtggccaccccccagcagtacccg
ggcaccccaggcttctacccaggcaccagcccagctgaatatggtacttatgcaggggca
tactacccggcccaacagcagtacacgccctccgtgccggctgctccggttatcatgaac
cctccctcccagcagcagcaactatctccacagcaacagatccagcccaaaagggagcgc
aaacaggtacagatcataatacgagaccctaaccagggtggtaaagacatcacggaggag
attatgtcagggggcacccgcagtggcaccacccccacacccccacaggtgagcgacgac
tcttcagagtcatctggatcagagggcccagccgtagcccaggccaacggtgagaatgtg
acacctgtcgtggtcagaccagatgacagagggaaacctgcagccacactcatcactggc
cccccagccctgtctaaaacccctgaactggtcaagactgcccctgcccctacagaggtc
aaactcccagacacggacagtaaatccccttccttaccccaggacctacccacacccccg
cgggtaactaccaccctccacactactgcccctggcacccccccaccctcaactagtccc
attgcagacatggacgctccagccccaaccgctgctccagccccaaccgctgctccagcc
ccaaccgctgctccagccccaaccgctgctccagccccaaccgctgctccagccccaacc
gctgctccagccccaaccgctgctccagccccaaccgctgctccagccccaaccgcccct
aaagtgcctgcttaccctgcacccctgcctgaaccccgacccactcctgcagccgaggag
cagccctcagccgccaaggaggcgcgggaggaggtgaaggagaaagaggagattaaagag
gtgacggaggctagagaagtgactacatcatctaaacctgagccttcccttgctccagtg
accaaccctagcagcagcactaatggtgtgtctgccacccagccactcccagaggaggag
ccagcagccctgtccatcaccatgccctccccccaggcagcagaacccccgctggacttt
cccatcgcccagccagaggagctccggctgcccaacggcctgccgctccccagcccccag
gaccctgagaaggtttctgcagaatcgtctgagtgtgacctcagccccttcgctgagcct
gaggtggccccattacagagggaggcacccgcgcctgtcgccgccacggccacgcccgac
cccgtcgtccaggctaccgttgcccctgtggtcctagctgagactgctagtactacagag
gtaacccctcgccaaatggaagacgagatggactctccaccatcacagcgcaccacccca
gccggggagaattctatgcaagctgctgtttctgtgcctaagaagaagaggaagatgaag
gatctgaacaggaaggaggctgttggagacctcctggatgcctttaaggaggagcaggta
gtgcagagcccgccagagcaggccacacccacttctgcctctgacgccgaggagccccgc
ccagccgccacccctgccgtcgcagaggtggatgagacgtgggaggagaaggaggacaaa
ctggatgcagagaacattgaacccaatcccggggatctgaagtaccagtacaaagaggaa
ctatgtaggcctatagacccagaggagaagaagaggtatgacagggacttcctgctgggc
ttccagttcatcagtgctgccatgtccaagcctgagggcctgcctcagatcagtgatgtg
gtgctggacaaggcgaataaggcccctctccgccagctggaccccagccgtttgccgggg
atgaacatgggccccgacttcacgccctcatttgccaacctgggcaggcctggaatgggt
ggaggaggtggacacagaggtggaccaccctctggtatgagtggtggaggaccgcgtcgc
tcccagcagggccagcgtaaggagcccaggaggatcatcaacatctcttcgtctctgacg
gacgacgtgaagctcaacaaggctgaggatgcctggaagcccgctgtcaagaaggctgcc
agtgggcaagctgctcctgaggaggagagcgatgacccagaacaggccaagacccaggag
ctgtttaagagggtccgtagtatcctgaacaagctgacccctcagatgttccaacagctg
atgaagcaggtcaaggagctgaccatcgatacggaggagaggctgaaaggagtgatagat
ctgatctttgagaaggccatttctgaacccaacttctccgtggcctacgccaacatgtgc
cgctgccttatggggctcaaagtccccactacagacaagttgggagtcactgtgaatttc
cgcaagctgcttctgaaccgctgtcagaaggagtttgagaaggacaaggacgatgatgtc
gtctttgacaaaaagcaaaaagagctggatgctgcagccatggaggagaaggatcgcctg
aaggctgagttggaggaggccaaagacatggcacggcgccggtcgctaggcaacataaag
ttcatcggtgagctgttcaagctcaagatgctgacggaggccatcatgcacgactgcatc
gtcaagctgctgaagaaccacgatgaggagtcactagagtgcctctgtagactcttgtca
actatagggaaggacctggactttgaaaaggcgaagcctcgtatggaccagtactttgtc
cagatggacaagatcatcaaggagaagaagacatcgtccagaatccgcttcatgctgcag
gacgtactggacctcaggaagaatacgtgggtccccaggagaggagagcagggccccaag
accatagaccagatccacaaggaggcagagctggaggagcacagggaggttctcaaggtg
cagcagcaactcctcaaccagaacacccgaggaggaggtggaggacgtggtggtggtggt
ggtggtggtggtggtggaggaggaggaagagatcaagggaaccgcgggggccaacacccc
caggcgggccagaggagtcagccccaggacgaggactggaacacagttcccatctccacc
aagagcagacccatcgacaccagccgactcagcaagatcactaagcccggggctttggac
ttcaacaaccagctgctggcgccccagctcgggggtaagggcatgtggggcagttggggc
aagggcagcagtggaggcaccaccggagccaaacccgccggggaagccaccccagagtca
ggaggccgcccagccaccagcacccttaacaggttctcagccctgcagccacagcagccc
tcctcagggccctcacaggactcggacagaagagttcctctaaggaacagctcgagccgg
gaccgtggcagcgacagatttgagcgtcatgaccgtggcagcaacgaccgcttcgaccgg
cgggacgaccgtgacaggaaccggcccctggtcaccaagcggagctttagcagggagacg
gaggagcacagcagagagagggagcaccgcggcccttctgatcccatacgccgcgtagcc
agcatgaccgacgacccgggcagcagagaccgagctaggagcaaagagaatgtgaagagg
gaagctgttgcaacacctcctacccagaccaaaccttccttgagtgaagaagagctggag
aagaaggccacagctatcatagaggagtacctacacatcaacgacatgaaggaggcgctg
cagtgtgtagtggagatgaacagcacccggctgctctttgtgtttgtacggagcggtctg
gagtctactctggagcgcagccccatcgccagagaacgcacaggcctgctgctgcaccag
ctgtacaaggcaggcaccctccccacagagcagtactacagagggcttcaggagatactg
gaggtggcggaggacatggccatagacatcccccacatctggctctacctggctgagctc
atcacccctatgctccacgaaggaggcatccccatgggaccgctcttcaaggagatatcc
aagcccctggttcctcaggggacggctggagttctgctggtccagatcctcaccctactc
tgcagaggaatgagccgtaaaaaggcaggcgccatgtggagggaggcggggcttagctgg
aaagactttctgcctgaggacgaggacgtcaacaagtttgtgacagaaaagaatgtggcg
ttcaccctgggaggaggaggagatgatgagacagagaagggcagtaagaaggagctgagc
tcagaggagctgaacaaacagctggacagactcatacaggacaaggctgacaaccagagg
atctacgattgggtcgaggctaacctggacgagacacagatatcctccaacgtgtttgtc
agagccgtcatgacagccatctgccagtcggccatcctgtgtgagaacccttacaagttg
gatgcgaaggtgatcacccggagggccaggctgctccacaagtacctgaaggatgagcag
aaggagctgcaggctctctacgccttgcaggccctcatggtggagctggagcaacctgcc
aacctgctgcggatgttctttgacacgctgtacgacgaagacgtgatcaaagaggaggcc
ttctacaagtgggagtccagtaaggaccccgctgagatgcagggcaagggtgtggcactg
aagtcagtcactgccttctttacctggctccgtgaggctgaggacgaggagtctgacaac
agctag
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integrated database retrieval system
