Salmo trutta (river trout): 115206667
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Entry
115206667 CDS
T08542
Name
(RefSeq) homeobox protein cut-like 1
KO
K09313
homeobox protein cut-like
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115206667
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
115206667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
PA28_N
APH
Motif
Other DBs
NCBI-GeneID:
115206667
NCBI-ProteinID:
XP_029629713
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All DBs
Position
13:85928497..86038245
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AA seq
1336 aa
AA seq
DB search
MAANAGSMFQYWKRFDLQLLQRELDATATQLANRQDESEQSRKKLIDQSRDFKKNTPEDV
RKQVAPLLKSFQGEIDALSKRSKEAEGSFLNVYKTLIDVPDPAPALELGQQLQLKLQRMH
DIETENLKLRETLEDYNKEFTEVKNQEVTIKALKEKIREYEQSLKNQAENLVQEKQVQLH
NDYAEKERKLQESQESMSSKLVEAEHKAQSLQTALETTQAELFDLKTKYDEDCTAKADEI
EMVMTDLERANQRAEAAQREADTLREQLTSSNQSLQLTTQIQTTPDMDQTVEAVSRSSLE
AELGAKDRETVQLVEDVQRLQASLSKLRESSSTQITQLQIQLSTKTATLKQLEEKLQEQA
DYEEVKKELSILKSMEFGPTDSSVQDMSKPLEVLLLEKNRSLQSESSSLRIANTELSGSA
GRKGKEASVEETTTPSTPSLPPPLLPPSPQPRTPTDPLNTSITNGTHPFTPTGIGQDFYS
PPFPLVGGKMSLNSLLQRQLMQTFYSKALQESTQGAALLFAPVHYTSTSTSGSGSSPVPL
SASPLQSPAGPEVNGSGGAPSPSPSQSEGTGGSVSDWEDMDTSEIARQIKEQLIKHNIGQ
RVFGHYVLGLSQGSVSEILARPKPWSKLTIRGKEPFHKMRQFLADDQNILALRSIQGRQR
GNITTRIRTPECGSDDAIKSILEQAKRELHVQKSDFSHGPSPGGGLRGGGGGGSDEAIRS
ILEQARREMQAQQAAVEPSLKASSSSSTSSSHSQRDFLVSHLAASFPAYTPLALSMKKPP
ANIPGSPSSPFTVLDFSSSVKREDRGVSMPDGMVDGVPGLGRSTEAFAQAGGGHWREQWW
SNMNPDPRRDKPTLGGEENHNREDSKEALGSVCDVPSHRKPWSKMTSRGLRMQLWLNGDL
SQNIHIKPAHNQAEGTPSQTSASCSPAPAEGTSSQTSASCSPPPESPLSSAEESLNGLGG
DRDPLAPKAPSLEPPSGEPSGGESQPGTPLPLPGPITGLSIQETIAMSPELDTYVLTKKV
KEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWQKLSLKGREPFVRMQFWLQDPQKV
EKLMDMKRLEKKAYLKRRHSSLSDSRSVDGGLAGPDFLQSSSPQHQRRPQLYQKKVRVVL
GPEEKEALKRAYQEKPYPSPKTIEELASQLNLKTSTVINWFHNYRSRIRRELFIEEIQAA
GSAAAAKAGEGDSCDGTESDGTVEGRHRGPTGPEEHKEASEDQDMEVRVEAGVSGVSPVQ
RNCTTSGSAGPGSSSSSLFGPPEAGLSLSTPSSQPSTPARNPRDNTLRRKKAANLDNIIH
RLEKAAGKEDPSEWEF
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaatgcgggatcaatgtttcaatattggaagcgctttgatttacaactactg
cagagagaactagacgccaccgccacacagctagccaacagacaggatgagagcgaacag
tccaggaagaaactcatcgaccagagccgcgacttcaagaagaacacgccagaggatgtc
agaaagcaagtggctcctctgctaaagagcttccagggagagatcgatgccttgagcaaa
agaagtaaagaggcagaaggttccttcttgaacgtctacaagacattaatagatgtccca
gaccccgcccctgcgctggagttgggtcagcagttacagctgaagctccagcggatgcac
gacatcgagacagagaacctcaaactccgagagactctggaggactacaacaaagagttt
acagaggtcaagaaccaggaggtgactattaaagcgctgaaggagaagatccgggaatat
gagcagtccctgaagaaccaggctgagaacctggtccaggagaaacaagtccagctccac
aatgactatgcagagaaggagagaaagctccaggagagccaggagtccatgtcctctaag
ctggttgaggctgagcacaaggcccagtccctacagacagctcttgaaacaactcaggca
gagctctttgatctgaagaccaagtatgacgaggactgcacagcaaaggccgatgagatt
gaaatggtgatgaccgatctagagagagccaatcagagggcggaggcagcacagagggag
gcggacactctgagggagcagctgacctcttctaaccaatccctgcagctgaccacccag
atccagaccaccccagacatggatcagacggtggaggcggtgtcccgctccagtctggag
gcagaactgggggccaaggacagggagacggttcagctggtggaagacgttcagagactg
caggccagcctgtctaaactcagagagagctccagcacgcagatcacacagctgcaaata
cagctcagcaccaagactgccaccctcaagcaactggaggaaaagctgcaggaacaggct
gactatgaggaggtgaagaaagagctgagcatcctcaagtctatggagtttggcccaact
gacagctcagtgcaggacatgtctaaacccctagaagtgttgttgttggagaagaaccgt
agtctgcagtctgagagttcctctctgcgcatcgccaacacagagctgagcgggtcagcc
gggcggaaagggaaagaggcgtccgtggaggagaccaccacgcccagtaccccctccctg
cctcctcctcttctccctccctccccccagccccgaaccccaactgacccccttaacact
tccatcaccaacgggacacaccccttcacccccacgggcatcggccaggacttctacagc
ccccctttccctctggtggggggcaagatgtcccttaactccctcctgcagcgccagctc
atgcagacgttctactccaaagccctgcaggagtccactcagggagcagctctactgttc
gcccctgtccactacacctctacctccacctctggctctggctctagccctgtcccgctc
tcggccagccccctgcagtctcctgcaggcccagaggtgaacggtagtggcggtgccccg
tccccgtctcccagccagtctgaggggactgggggcagtgtgtctgactgggaggacatg
gacacctcagagatcgcccgacagatcaaggagcagctgattaaacacaacatcggccag
cgggtgtttggccactatgtactgggcctgtcccaaggctcggtcagtgagatcctggct
cggcccaaaccctggagcaagctgactatccgggggaaagagcccttccacaagatgagg
cagttcctggctgacgaccagaacatcctggcactacgcagcatccagggacggcagaga
ggtaacatcaccacacgtatccgtactccagagtgtggttcagacgacgccatcaagtct
atcctggagcaggccaagagagagctgcatgtgcagaaatctgacttctcccatggtcct
tctcctggtggggggctgagaggaggaggaggaggcggttcggacgaggccatccgctcc
atcctagaacaagctcgaagagagatgcaggcccaacaggctgctgtggaacccagcctc
aaagcctcctcttcctcctccacttcatcctctcactcccagagggacttcctggtctcc
catctggctgcctccttccctgcctacacccctctggctctctccatgaagaaacccccc
gccaacatcccaggctccccctcctcgccctttacagtcctggacttcagctctagtgtg
aagagggaggacagaggagtgtcgatgccagacggcatggttgatggcgtgcccgggctg
ggtcggagcaccgaggcgtttgcccaggctggaggggggcactggagggagcagtggtgg
agcaacatgaacccagacccccgcagagataaacccacactggggggagaggagaaccac
aaccgcgaggactctaaagaggctctaggaagtgtgtgtgacgtgccgtctcatcgtaaa
ccctggagcaagatgacctccagaggcctgcgtatgcagctgtggctgaacggtgacctg
agccagaacatacacatcaagcctgctcacaaccaagcagagggcactcccagccagacc
tcagccagctgcagccctgccccagcagagggcacttccagccagacctcagccagctgc
agccctcctccagagtctccactgagctctgctgaggagtcactcaatggtttagggggg
gaccgggaccctctggcccccaaggccccgtctctggagcccccatctggtgagccgtcg
gggggagagtcccagcccggtacccccctgcccctccctggccccatcacaggcctcagc
atccaggagacgatagccatgtctccagagctggatacatacgtcctcaccaagaaggtc
aaggaggtgctcactgataacaaccttgggcagcgtctgtttggggagagtatcctgggt
ctgacccagggctctgtgtctgatctgctggctcggcctaaaccctggcaaaagctcagc
ctgaagggacgtgagccattcgtccgcatgcagttctggctgcaggacccacagaaagtg
gagaaactgatggacatgaaacgcctggagaagaaagcctacctgaagagacgccacagt
tcgctgagtgatagccgttctgtggacggtggcctggcagggccagacttccttcagagc
tccagcccccagcaccaacgacgacctcagctgtaccagaagaaggtccgggtggttctg
ggtcccgaggagaaggaggctctgaagagggcttaccaggagaaaccctacccctcccct
aaaaccattgaggagctggcctcccagctcaacctgaagaccagcactgttatcaactgg
ttccacaactacaggtctcgtatccgcagggagctcttcatagaagagattcaggctgca
gggtcagcggcagcagctaaagcaggggagggggacagctgtgacgggacagagtccgat
ggcacggtggagggccgtcaccgagggcctacagggccagaggagcacaaagaggcctct
gaggaccaggacatggaggtcagggttgaagctggggtgtcaggtgtatcccctgtccag
agaaactgcactacctcaggttcagccgggccaggctccagcagcagcagcctcttcggt
ccccctgaggcaggtctctctctttcaaccccctccagtcaaccctcaaccccggctagg
aaccccagggacaataccctgcgcaggaagaaagctgccaaccttgacaatatcatccac
agactggagaaggctgccggcaaggaagacccgtctgagtgggagttctga
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