Salmo trutta (river trout): 115206685
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Entry
115206685 CDS
T08542
Name
(RefSeq) autophagy-related protein 16-2-like isoform X1
KO
K20868
autophagy-related protein 16-2
Organism
stru
Salmo trutta (river trout)
Pathway
stru04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115206685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115206685
03029 Mitochondrial biogenesis [BR:
stru03029
]
115206685
Membrane trafficking [BR:
stru04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
115206685
Others
Specific organelles associated proteins
Auto phagosome
115206685
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
115206685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
ATG16
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_NWD2_C
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_WDR41
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_ACSF4
Ge1_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Tricorn_2nd
Beta-prop_Vps41
FKBP15
Cytochrom_D1
Tricorn_N
Motif
Other DBs
NCBI-GeneID:
115206685
NCBI-ProteinID:
XP_029629745
Ensembl:
ENSSTUG00000005156
UniProt:
A0A673WFM2
LinkDB
All DBs
Position
13:complement(87108498..87159223)
Genome browser
AA seq
604 aa
AA seq
DB search
MAALGAECVEAFKVEEKINAQKTDDSWKRHIIRQLKHRDKYQKAMFQDVILAYINLLERS
NQRALITKGILGSGSRYPASSNDSLTSLISKNDDLKKTTGELAYQVLELQQEIKIKDSVL
EEQHARMREVKRDLLGVQAEDGSLKVRVAEVTEGNRLLKREYDSLLERHHDMDQTFREEK
LRGQELLEELVRRKQHAAVRMNSRNERRVRAREASLQKELETAGKVKVTIDVGSVSAPAS
REASPKSDLAERRTTRLFRSASVTSPPRILDSIKELFDRKKRRGNSLCLSLEEELYVPVG
ICLAARVPARALHVLDAHELGINAVRFSSSCNLLATGGTDRSIKLWDVKAGMLHNRGTLD
GSNEGITSIEFDQTGTRVLAASYDKSALFWRLDDSAPKLTLTGHSRKVTAAKFKCSLRQV
VTGSADRTVKIWDLHRAACIQTIEVLSYCSDVVCSEHVIVSGHYDRKIRFWDSRAASCTQ
EVPLQGKVTSLDISTDHRQLLSCSRDESLQVVDLRMNNSRICFRAEGFKCGCDSTKAIFS
PDGSYLAAGSADGAVYIWNVNSGNLETRLPDMHSSSINAVAWSGSGEYVVSVDKSRRAVL
WSDI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctaggagcggagtgtgtcgaggcgtttaaagtggaagaaaagataaacgca
cagaagacggacgactcatggaaacgtcatatcatccgccaactcaaacatcgggataag
tatcagaaggcgatgtttcaagatgtcatactggcatatatcaatctgctggagaggtcc
aatcagagagccctcatcacgaaaggcatcctgggatctggttcaaggtacccagcctcc
tccaacgattccttgacgtctctgatttcgaaaaatgatgatctgaagaaaacaacaggg
gagctggcctaccaggtattggagctccagcaggagattaagatcaaagactccgtactg
gaagaacaacatgccaggatgcgtgaggtgaagagggatctgctgggggtgcaggctgag
gatggaagtctgaaggtgcgtgttgccgaggtgacggaggggaaccggctgttgaaacgg
gagtacgactctctgctggagcggcaccatgatatggaccagaccttcagagaggagaag
ctcagaggtcaggaattgctggaggaactggtccggaggaagcaacacgcagccgtcagg
atgaacagccgcaacgagagacgggtcagagccagagaggcaagtcttcagaaggaactg
gagaccgccgggaaggtgaaggtgacaatcgatgtcgggtctgtcagtgccccggcctcc
agagaagcctcccctaagagtgatctggctgagagacggaccactagactgttcaggtca
gcctcagtaacatcccctcccaggattctagattccatcaaagagctttttgatagaaag
aagcgtcgggggaactcgctgtgtctgagtctggaggaggagctgtatgttcccgtaggg
atctgtctggctgccagggtccctgctagggctctgcatgtcctggatgcacatgagttg
ggcattaatgcagtgaggttcagctccagttgtaacctgcttgctactggagggacagac
agatccattaagctgtgggacgttaaagcaggcatgctccacaacagaggtacactagat
ggcagcaacgaaggaataaccagcatagagtttgaccaaacaggcaccagggttttagcg
gcgtcatatgataaatcagctctgttctggcggctggatgactctgctcccaagctcaca
ctgacaggccactcacgtaaagtgacagcagccaagtttaaatgcagcctgcgccaggtg
gtgacaggaagcgcagacaggaccgtcaagatctgggatctccaccgcgctgcttgtatc
cagaccattgaggttctatcttactgcagtgatgtggtgtgttctgagcacgtcatcgtc
agtggacactatgacaggaagatacgcttctgggacagcagggctgccagctgtacccag
gaggttcctctccaggggaaggtaacgtctctggacatctctacagaccaccgccagctc
ctcagctgctccagagacgagagtctgcaggtggtcgaccttcgcatgaacaactccagg
atatgcttcagagctgagggcttcaaatgtggctgtgacagcactaaggctatattcagt
cctgatgggagctacctggcagcaggatcagcagatggagccgtctacatctggaacgtc
aactctggcaacctggagacacgactaccggacatgcacagttcgtccatcaacgcggtg
gcctggtctgggtctggggagtacgtggtcagtgtggacaagagccggcgtgccgttctc
tggagcgacatttaa
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