Salmo trutta (river trout): 115206737
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Entry
115206737 CDS
T08542
Name
(RefSeq) nectin-1-like
KO
K06081
poliovirus receptor-related protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03266
Virion - Herpesvirus
stru04514
Cell adhesion molecules
stru04520
Adherens junction
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
115206737
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115206737
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115206737
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115206737
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115206737
04090 CD molecules [BR:
stru04090
]
115206737
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
Nectin family
115206737
CD molecules [BR:
stru04090
]
Proteins
115206737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
Ig_2
I-set
ig
TM_ErbB1
C2-set_3
Beta-APP
DUF4786
Motif
Other DBs
NCBI-GeneID:
115206737
NCBI-ProteinID:
XP_029629804
Ensembl:
ENSSTUG00000007895
LinkDB
All DBs
Position
13:complement(89729500..89917797)
Genome browser
AA seq
499 aa
AA seq
DB search
MTMLASVWIVLLAVNIQAGDGQSVQMDSIKSGFVGSQVELRCIFVNSNPPVKISQVTWQK
FLNGTKQNVAIANPSLGVSVLPPFKERVTFKQAAVRHRTPSLEDTTIMFSNLRLSDEAAY
ICEYTTFPAGNRENMVNLTVFARPLTRMTLTTPTIVARPQKRKMTVATCLSANGKPQSVI
KWDTRLKGEATFQETQNSNGTVTVRSNYVVVPSRETHKQKLTCIVTYRNERITDSVVLNV
QYEPEVKIEGFDGNWYLNRQDVSLTCNTDANPPVTVYQWKLLNGSLPSTVEIRNNSLIFK
GAVTYELAGTYVCDATNGIGTRTGLVEVNVTEFPNNPPPGGREIPQEQHNAGAVIGCAVG
GVVLLAAAATLLFVFLRRRQRTFKGDYSTKKQVFGNGYSKAGGLPAHPPIPNNLQYPDDS
DDEKKPAQIAVTGGFEASERDFDGDAEDLKRPYFTVDEGESQDYDERTLAFQYNPGPEIA
DDMVSQTDGSVISKKEWYV
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgttggcgagtgtttggatagtcctcctggctgtcaatatacaagctggagat
ggacagagtgtccagatggactccattaagtcaggcttcgtgggctcccaggtggagcta
cgttgtatcttcgttaactccaaccccccggtcaagatctctcaggtgacatggcagaag
ttcctgaacggcaccaaacagaacgtggccatcgccaacccgtcgctgggcgtctccgtg
ctcccgcccttcaaggagagggtgaccttcaagcaggcggcggtccgccaccgcaccccg
tctctggaggacaccaccatcatgttctccaacctgaggctgtctgatgaggctgcatac
atctgcgagtacaccaccttccctgctgggaaccgagagaacatggtcaacctcactgtg
tttgcccgacctctgacccgaatgaccttgaccacgcccaccatcgtggcccgcccccag
aaacgtaagatgaccgtggcgacatgcctctcggccaatgggaagcctcagagcgtgatc
aagtgggacacgcggctgaagggcgaggccacgttccaggagacgcagaacagcaacggc
acggtgaccgtccgcagtaactatgtggtcgtgccgagcagagagacacacaaacagaaa
ctcacctgcatcgtaacctaccgcaacgagaggattacggacagtgtcgtgctcaacgtg
cagtatgaaccggaggtgaagatcgagggttttgatggtaactggtacctgaaccgtcag
gacgtcagcctcacctgcaacactgacgctaacccccctgtcaccgtctaccagtggaaa
ctgttgaatggatctcttcccagcaccgtggagattcgtaacaactctctgatcttcaag
ggggcggtgacctacgagttagctggaacatacgtgtgcgatgccaccaatgggatcggg
actcgtacaggtctggtcgaggttaacgtcactgaattccctaacaacccgccacctggg
ggccgtgagatcccgcaggagcagcacaatgcgggtgccgtcatcgggtgcgccgtgggc
ggggtcgtcctgttagcggcggccgccaccctgctctttgtcttcctgcgccgccgccag
cgcaccttcaagggcgactacagcaccaagaaacaggtgtttgggaacggctacagcaag
gccgggggcctgccagcccaccctcccatccccaacaacctgcagtacccagacgactcg
gatgacgagaagaagcctgcacagattgctgtgaccggagggttcgaggcgagcgagcgt
gattttgacggagacgcggaggacttgaagaggccctatttcacagtggacgaaggagag
agtcaagattacgacgaacggactctcgctttccagtacaaccccgggccggagatagcc
gatgatatggtgtcccaaaccgatggctctgtcatttcaaagaaagagtggtatgtgtaa
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