KEGG   Salmo trutta (river trout): 115206737
Entry
115206737         CDS       T08542                                 
Name
(RefSeq) nectin-1-like
  KO
K06081  poliovirus receptor-related protein 1
Organism
stru  Salmo trutta (river trout)
Pathway
stru03266  Virion - Herpesvirus
stru04514  Cell adhesion molecules
stru04520  Adherens junction
stru05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    115206737
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    115206737
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    115206737
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    115206737
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:stru04515]
    115206737
   04090 CD molecules [BR:stru04090]
    115206737
Cell adhesion molecules [BR:stru04515]
 Immunoglobulin superfamily
  Nectin family
   115206737
CD molecules [BR:stru04090]
 Proteins
  115206737
SSDB
Motif
Pfam: C2-set_2 V-set Ig_3 Ig_2 I-set ig TM_ErbB1 C2-set_3 Beta-APP DUF4786
Other DBs
NCBI-GeneID: 115206737
NCBI-ProteinID: XP_029629804
Ensembl: ENSSTUG00000007895
LinkDB
Position
13:complement(89729500..89917797)
AA seq 499 aa
MTMLASVWIVLLAVNIQAGDGQSVQMDSIKSGFVGSQVELRCIFVNSNPPVKISQVTWQK
FLNGTKQNVAIANPSLGVSVLPPFKERVTFKQAAVRHRTPSLEDTTIMFSNLRLSDEAAY
ICEYTTFPAGNRENMVNLTVFARPLTRMTLTTPTIVARPQKRKMTVATCLSANGKPQSVI
KWDTRLKGEATFQETQNSNGTVTVRSNYVVVPSRETHKQKLTCIVTYRNERITDSVVLNV
QYEPEVKIEGFDGNWYLNRQDVSLTCNTDANPPVTVYQWKLLNGSLPSTVEIRNNSLIFK
GAVTYELAGTYVCDATNGIGTRTGLVEVNVTEFPNNPPPGGREIPQEQHNAGAVIGCAVG
GVVLLAAAATLLFVFLRRRQRTFKGDYSTKKQVFGNGYSKAGGLPAHPPIPNNLQYPDDS
DDEKKPAQIAVTGGFEASERDFDGDAEDLKRPYFTVDEGESQDYDERTLAFQYNPGPEIA
DDMVSQTDGSVISKKEWYV
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgacgatgttggcgagtgtttggatagtcctcctggctgtcaatatacaagctggagat
ggacagagtgtccagatggactccattaagtcaggcttcgtgggctcccaggtggagcta
cgttgtatcttcgttaactccaaccccccggtcaagatctctcaggtgacatggcagaag
ttcctgaacggcaccaaacagaacgtggccatcgccaacccgtcgctgggcgtctccgtg
ctcccgcccttcaaggagagggtgaccttcaagcaggcggcggtccgccaccgcaccccg
tctctggaggacaccaccatcatgttctccaacctgaggctgtctgatgaggctgcatac
atctgcgagtacaccaccttccctgctgggaaccgagagaacatggtcaacctcactgtg
tttgcccgacctctgacccgaatgaccttgaccacgcccaccatcgtggcccgcccccag
aaacgtaagatgaccgtggcgacatgcctctcggccaatgggaagcctcagagcgtgatc
aagtgggacacgcggctgaagggcgaggccacgttccaggagacgcagaacagcaacggc
acggtgaccgtccgcagtaactatgtggtcgtgccgagcagagagacacacaaacagaaa
ctcacctgcatcgtaacctaccgcaacgagaggattacggacagtgtcgtgctcaacgtg
cagtatgaaccggaggtgaagatcgagggttttgatggtaactggtacctgaaccgtcag
gacgtcagcctcacctgcaacactgacgctaacccccctgtcaccgtctaccagtggaaa
ctgttgaatggatctcttcccagcaccgtggagattcgtaacaactctctgatcttcaag
ggggcggtgacctacgagttagctggaacatacgtgtgcgatgccaccaatgggatcggg
actcgtacaggtctggtcgaggttaacgtcactgaattccctaacaacccgccacctggg
ggccgtgagatcccgcaggagcagcacaatgcgggtgccgtcatcgggtgcgccgtgggc
ggggtcgtcctgttagcggcggccgccaccctgctctttgtcttcctgcgccgccgccag
cgcaccttcaagggcgactacagcaccaagaaacaggtgtttgggaacggctacagcaag
gccgggggcctgccagcccaccctcccatccccaacaacctgcagtacccagacgactcg
gatgacgagaagaagcctgcacagattgctgtgaccggagggttcgaggcgagcgagcgt
gattttgacggagacgcggaggacttgaagaggccctatttcacagtggacgaaggagag
agtcaagattacgacgaacggactctcgctttccagtacaaccccgggccggagatagcc
gatgatatggtgtcccaaaccgatggctctgtcatttcaaagaaagagtggtatgtgtaa

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