Salmo trutta (river trout): 115206795
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Entry
115206795 CDS
T08542
Symbol
smc4
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115206795 (smc4)
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
115206795 (smc4)
Condensin II
115206795 (smc4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
AAA_29
HMMR_N
ABC_tran
Get2_like
Motif
Other DBs
NCBI-GeneID:
115206795
NCBI-ProteinID:
XP_029629851
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Position
13:60097245..60116253
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AA seq
1168 aa
AA seq
DB search
FEQIGSTDWKYIFIFHPLHFSFFLSLPWRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIR
TKKXSVLIHSSDQHKDVQSCIVEVHFQKITVKEGDDYEVIPNSKFYVSRTASKDNSSSFH
VNGKKATFKDVGTLLCSHGIDLDHNRFLILQGEVEQIAMMKPKGQTKHEEGIIGSCRLKQ
PIHTLRRRVELLNEQRGEKLNRVKMVEKEKTALEGEKNIDFLTLENDIFKQKSQLCHHNL
QKRVANKEEKQRIQDDTKELTEKNTTIAEEMEKNQGLKNVEKKQGKLTKYIEFQKEKFTQ
LDLQDVEVXEKLKHTKSKTKKLQKELEKEKLEEVRNVPASSEKTISEASARREELEKQRG
KEEKLKEVMESLKEETSGLQQEETKELMELSKAVNATRSRQDVAQSELDIYLSRHNTALT
XLNMATQSLQTASDTLRDRRAAIKELQVKIPQCEQELRKDEAELEQLLQADDQTRELVGD
MXEAKSSLSYNRSRGKVLDALMQQKRSGKIPGILGXRGDLGAIDEKYDIAISSSCGSLDN
ILVDSIDTALKCVNFLKAQNIGVATFVGLDKMKVWENEMGPISTQENILCLFDMVRVQDD
GMKPAFYFALRVTLVAKDLEXATRLAFQKDKCXRVVTMHRQIIEMAGTMSGGGGRVMRGR
MGSSIGTEVTQQELDCMESKLNEKVVQLQGCQERKLQLEEKVXRLXQQLRNMKNTLEKYS
MQSLAEQEAHLKPQIKELEANVLAAAPDKNKQKQLEKTLKDLQKDFEAASSRAGKVEVKR
LHTLIVDINSHKLKAQQDKLDKVNKELDDCSSAITKAQVAIKTAGRSHLEKASDGVSRPE
GELEENEKSLGELTDHLKXAGEIMKACQEAXAALPEVQERHQGVVREIKALQEHTLQERV
ESLSVRLRVEQMDTSITEHTNKIKHWQSEVGVVCIHXADTLIQSGGAARADLAVIKGPDV
NQVSLMEARCAQMKPNLGAIAEYKKKEELYLKHVAELDEITERDNFKRGCKQRLNEFMAG
FNVTNKLKNYQMLTLGGDAELELVDSLDPLSEGIMFSLRPPKKSWKKIFKLSGGEKTLSS
LALVFALHHFKPTPLYFMDETDAALDFKHVSIVACYIYEQTKNAQFISLRNNMFEIADCL
IGVYKTHNTTKIVGINPKTIVFKQTISV
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
tttgaacagattggaagtacagattggaagtacatttttattttccacccacttcatttc
tctttttttctctcccttccctggcgtttttcttgtatcattggtccaaatggcagtggg
aagtccaatgtgatagattcaatgctctttgtgtttggctatagggctcaaaaaatcaga
accaaaaaannctctgtgctgattcacagctctgaccagcacaaggatgtgcagagctgc
attgtggaagtgcattttcagaaaattactgtcaaggaaggagatgactacgaagtcatc
cccaacagcaagttctatgtttccagaactgccagcaaagacaattcctcgtccttccac
gtcaatggcaagaaggccacttttaaagatgtggggactctgctgtgtagccatggcatt
gacctggaccacaacagatttctgattttacagggtgaggtggagcagatagccatgatg
aagcccaaggggcagacgaagcatgaagagggcatcattggctcctgccgcctgaagcag
cccatccacaccctgaggcgccgtgtggagctcctcaacgagcagaggggagagaagcta
aacagggtcaaaatggtggagaaggagaagactgctttggagggagagaagaacattgac
ttcctcactctggagaatgatattttcaaacaaaagagccagctctgccaccataacctc
cagaagagagtggcaaacaaagaggagaagcagaggatccaagacgacaccaaggaactc
acagagaaaaacaccaccattgctgaagagatggagaagaaccaaggtctgaaaaatgtg
gagaagaaacaaggcaagctgaccaagtacattgagttccagaaggagaagtttacccag
ctggacctgcaggatgtggaggtctgagagaaactgaagcacaccaagagtaagaccaag
aaactacagaaagaactggagaaggagaagctggaggaggtgcgtaacgtgccggccagc
agtgagaagaccatctctgaggcgtccgctcgcagggaggagttggagaagcagaggggg
aaggaggagaaactgaaggaagtgatggagagtctgaaggaggagaccagtggcctgcag
caggaggagacgaaggagctgatggagctgagtaaggctgtgaacgcgacacgctcccgt
caggacgtggcccagtctgagctggacatctacctgagtcgccacaacaccgctctgacc
tagctcaacatggccacgcagtccctgcagaccgcctccgacacgctgcgagaccgccgc
gccgccatcaaagagctgcaggtcaaaataccccagtgtgagcaggagctcaggaaggat
gaggcggagctggagcagctgctgcaagcagatgatcagaccagggagctggtgggggac
atgnaggaggccaagagctccctgtcctataaccgcagcagggggaaggtgctggacgcc
ctcatgcagcagaagaggagcggcaagatccccggcatcctgggatgacgaggtgatctt
ggggccatcgatgagaagtatgacatcgccatctcatccagctgtggctctctggacaac
atcctggtggacagtatcgacacagccctgaaatgtgtcaacttcctcaaggcccagaat
attggagtggccaccttcgttggcctggacaagatgaaggtgtgggagaatgagatgggg
cccatctccacccaagagaacatcctctgcctgtttgacatggtgcgggtgcaggatgat
ggtatgaagccagccttctactttgccctgagggtcaccctggtggccaaggacctggag
taggcaacacggctcgccttccagaaggacaaatgctgaagagtggtcaccatgcacaga
cagatcatagagatggctggcaccatgagtggaggtggagggagagtgatgcggggcagg
atgggctcctccatcggcactgaggtcacccagcaggagctggactgtatggagagcaag
ctgaatgagaaggtggtgcagctgcagggctgccaggagaggaagctgcagctggaggag
aaagtctagagactctgacagcagctcagaaacatgaagaacaccctggagaaatacagc
atgcagagcttggcagagcaggaggctcacctgaagcctcaaattaaagagctagaggcc
aatgtcctggctgctgcccccgacaagaacaaacagaaacagttggagaagaccctgaag
gacttgcagaaagactttgaggcagcttctagtagggcagggaaggttgaggtgaagagg
ctccacaccctcattgtggacatcaacagccacaagctgaaggcccagcaggacaaactg
gacaaggtcaacaaggagctggacgactgctcctcagccatcactaaggcccaggtagcc
atcaagaccgcagggcgctcccatctggaaaaggcttctgacggtgtgagtcgcccagag
ggagagctggaggagaatgagaagagcctgggagagctgacggatcatcttaagnaggct
ggggagatcatgaaggcctgccaggaggcttaggcggcactgccggaggtgcaggagcgg
caccagggggtggtgagggagatcaaggccctgcaggagcacactctacaggaaagagtg
gagtccctcagcgtccgacttcgggtggagcagatggacacctccattaccgaacacacc
aacaagatcaaacactggcagagcgaggtgggtgttgtgtgcattcattgagcagatact
cttatccagagtggaggcgctgcccgtgctgacctggcggtcatcaaggggcctgatgtc
aaccaggtctccctgatggaggcccgctgtgcccagatgaagcccaacctgggagccatc
gcagagtacaagaagaaggaggaactgtacctgaagcatgtggctgagctggatgagatc
acagagagagacaacttcaagcgtggatgcaagcagaggctcaacgagttcatggctggc
ttcaatgtcaccaacaagctgaagaactaccagatgctgacactagggggtgacgctgag
ctggagctagtcgacagcctggaccccttatctgagggcatcatgttcagtctgcgtccc
cctaagaagagctggaagaagattttcaagctgtctggaggagagaagaccctgagctca
ctggccctggtgtttgctctgcaccacttcaagcccacgccactctacttcatggatgag
actgatgcagccctggacttcaagcatgtctccattgtggcctgttacatttatgagcaa
accaagaatgctcagttcatctccctgaggaacaacatgtttgagattgctgactgtctg
atcggcgtctacaaaacccacaacaccaccaagattgtgggaatcaaccctaaaaccatt
gtcttcaaacagacaatctcagtttag
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