Salmo trutta (river trout): 115206848
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Entry
115206848 CDS
T08542
Name
(RefSeq) LOW QUALITY PROTEIN: roundabout homolog 1-like
KO
K06753
roundabout, axon guidance receptor 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115206848
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
ROBO family
115206848
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
C2-set_2
Ig_5
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Toxin_19
Motif
Other DBs
NCBI-GeneID:
115206848
NCBI-ProteinID:
XP_029629886
Ensembl:
ENSSTUG00000009134
LinkDB
All DBs
Position
13:77877828..78332382
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AA seq
1672 aa
AA seq
DB search
MRVTWSGATPFVIVALLRLAQSQLLEGPLVPDTGAATQDGASEGATSAPTSEHEDDNSLG
YTGSRLRQEDSPPRIVEHPSDLIVSKGEPATLNCKAEGRPSPTVEWYKDGERVETDRDNP
RSQRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAISHNASLEVALLRDDFRQN
PADVMVAAGEPAVLECMPPRGHPEPSISWKKDSANIDDRDERITIRGGKLMITNARKSDA
GKYVCVGTNMVGERESEIAELTVLERPSFVKRPGSQVVLVDQSVEFRCEARGDPVPTVRW
RKDDGDLPKGRYEIREDHTLKIRRLSSADVGSYTCVAENMVGRAEASATLTVHVMSVPPV
FVVRPRNQVVAVGRTVTFQCEATGNPQPAIFWQREGSQNLLFSYQPPQPSSRVSVSQTGD
LTITDAERSDVGYYSCQALNIAGSVITKALLEVTDVVSDRPPPVVRQGPTNQTVSVDGTV
VLSCLATGNPSPTLLWRKDGVLVSTHDSRVKQLDTGALQIRYAKLGDTGIYTCIASTPSG
EASWKAYLDVQEFGVPVLPARPTDPNLIPSAPSKPEVTDVTRTSVTLSWKPNLTGATPTS
YIIEAFSHASGSSWQTLAEHVKTESYVLKGLKASAVYLFLVRAANAYGLSDPSPITETVK
TQDIPPTSQGVDHRQIQRELGEVVIHLHNPTILSSSSVRVQWTVEQQSQYIQGYKVMYRT
SPEGHQRSDWTVFEVRTPGEDSTVVPQLRKGVTYEFKVRPFFNEFQGTDSEVKIAKTLEE
APSAAPRGVTVSESGDNGTAIVVSWQPPPEEEQNGVVQEYKVRTLAGTPKFSLHTLRVVK
DSSGRMTEGVLEPENTLSQQISEVVKQPAFIAGIGAACWIILMVFSIWLYRQRKKRSGLS
TNYAGIRKVPSFTFTPTVAYQRGGEAVSTAGRPGLLNIGESATQPWLADTWPNSCSNHND
CSMNCCTAGQGNSDSNLATYSRPADCIANYNNQMESKQTNLMVPEGGVYGDVDLSNKINE
MKTFNSPNLKDGRFVGPGGPGGQPTPYATTQLIQSSILGNNINTDRDRGSGGGGGGGGGG
EMNEKHGWKPTPVQLQKQQEMTSQLHQYNIMEQNKLNKDHYRGGDSPMASTILYNQAHEA
HTGGSYNSSDRGSSSTSGSQGQQKGVRTPKLPKQSAMNWADLLPPPPANPPPCHNIEEYS
LSMDESYDPDMQCSLPPSRMYLQPDELEEEEEEEEEEMERGPTPPVRGAASSPAAVSYSH
QSTATLTPSPQDELQPMLQDTADSVGSGHRRNAVSPPPRPLSPSHTYGYISSPLSLDTDG
MEEEEEEEEGDETDAEVAKVHHHHTHTHLPHPHHPQQMHPRRLLLRGLEQTPASSMGDLE
SSVTGSMINGWGSASEEDNASSGRSSAVSSSDGSFFTDADFAQAVASAAEYAGLKVAKYT
NPTQGQEGGPGGRKYQMTPSGHRPGSPLSTDSNMSTANMQKRPPKKQKQHPAAGHPGLQR
REAFPEDLPPPPIPPPAGLKSPTHPSKTALETRGVMSPKAGEGRDRRGGSGGGYRPREGS
DPRTSSSERRETQDRQKNPRAGKGNKQEGGSTKARQHPGPEDILPYSRPSFPTVHSPRDR
DPRSSSSTSSRGSGGRRRGEGGAGARRNPNEMGLNTMGAFQPGDDDLEMVES
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcacatggtcaggtgccacgcccttcgtcattgtcgccctgctcaggcttgcc
caatcacagctgctggagggacctctggttccagacacgggcgctgccactcaggacggg
gccagtgaaggggccacctcggcccccacctcggaacacgaggatgataactccctgggc
tacacaggatcccgtctgcgtcaggaggactccccaccccggatcgtggagcacccctct
gacttgatcgtgtccaaaggggagccggccaccctcaactgcaaggcagaggggcggccc
agccccacggtggagtggtacaaggacggggagcgggtagaaacggaccgggacaaccct
cgatctcaacgcatgctgctgcccagcggctccctcttctttctacgtatcgtccacgga
cgacgctccaaaccggatgagggctcctacgtctgcgtcgcccgcaactacctgggagaa
gccatcagccacaacgcctcgctggaagtagcattactacgtgatgacttcagacagaat
cctgccgatgtgatggtggcagcgggcgagcctgcagtcctagagtgtatgccccctcgc
ggccatcctgaacctagcatatcctggaagaaggacagtgccaacatcgatgacagagat
gaacgaatcactatccggggaggaaagctgatgataaccaatgccagaaaaagcgacgct
gggaagtatgtgtgtgtcgggaccaatatggtgggagagagggagagtgagattgctgag
ctcactgtgctcgagcgacccagctttgtgaagcgtcccggtagccaggtggtgctggtg
gaccagagcgtggagttcaggtgtgaggcccggggtgacccagttcccaccgtccgctgg
agaaaagatgacggagacctgcccaagggaagatatgagatccgtgaggaccacaccctg
aagatccgtcgtctgagctctgcagacgtgggttcttacacctgcgtggcagagaacatg
gtgggcagggcggaggcgtcggccaccctcaccgtccacgtcatgtctgtgccccctgtg
tttgtggtgcggcccaggaaccaggtggtggcggtggggaggaccgtcaccttccagtgt
gaggcaacaggaaaccctcagcctgctatcttctggcagagagagggcagccagaacctg
ctcttctcctaccagcccccccagccctctagccgcgtctccgtctcccagacgggggac
ctgactatcacagatgcagagcgctcagacgtgggctactacagctgccaggccctcaac
atcgctggctctgtcatcaccaaggccctgctggaggtcactgacgttgtgtcggatcgc
ccacctccagttgtccgccagggtccaaccaatcagacagtgtctgtggacgggacggtg
gtcctgagttgcctagcaacgggtaacccctcccccaccctcctgtggaggaaggacggt
gtgttggtgtccactcatgactcccgggtcaaacagctggacacgggtgcactgcagatc
cgctacgccaagctgggtgacacaggcatctacacatgcatcgcctccactcccagtggc
gaggcctcgtggaaggcctacctggacgttcaagagtttggtgttccagtgctgccggcc
aggcccactgaccccaacctgatccccagtgccccctccaaacctgaggtcactgatgtc
acccgcacctctgtcaccctgtcgtggaagcccaacctcacaggagccacgcccacctcc
tacatcatagaggccttcagtcatgcgtcaggcagcagctggcagaccctggcagaacat
gtgaagactgagtcgtatgtgttgaagggcctgaaggccagtgctgtctacctcttcctg
gtccgagctgctaacgcctacggcctgagtgaccccagccccatcactgagaccgtcaaa
acacaagatatcccccccaccagtcagggagtggaccaccgtcagatccagagggagtta
ggagaggtggtcatccatcttcacaaccccaccatcctctcttcctcctctgtcagagtg
cagtggacggtggagcagcagtctcagtacatccagggttataaggtgatgtaccggacc
tctccagaggggcatcagaggagtgactggactgtgtttgaggtgagaactccaggggag
gacagtactgtggtgccccagctcaggaagggagtcacctacgagttcaaagttcgcccc
ttcttcaacgagttccagggaacagacagtgaggtcaagatagccaagactctggaggaa
gctcccagtgcagcccctcgtggggttaccgtctcagagagcggggacaatgggaccgcc
attgtggtctcctggcaaccacctccagaggaggagcagaatggggtggtccaggagtac
aaggtgagaacactggcagggactcccaaattctccctacatactctgagagtggtcaaa
gactcatcggggcgtatgacggagggtgtgttggagccagagaacaccctgtcccagcag
atcagtgaggtggtgaagcagccggccttcatagcggggataggagcggcctgttggatc
atcctcatggtgttcagtatctggctctaccgacagcgtaagaagaggagtggcctcagt
actaactacgcaggcatccgcaaggtgccatcctttaccttcactcctacagtggcgtac
cagagagggggagaggctgtcagcactgctggaaggccaggtttgctgaacattggggag
tctgctacccagccctggttggctgatacctggcccaactcctgctccaatcacaatgac
tgtagcatgaactgctgcaccgcaggacagggcaacagtgacagcaacctggctacatac
agccgcccagccgactgcatcgccaactataacaaccagatggagagcaaacagaccaac
ctgatggtgccggagggaggagtgtacggagacgtggacctctccaacaagatcaacgag
atgaagaccttcaacagccccaacctgaaggacggacgcttcgttgggccaggtggacca
gggggacagcccaccccgtacgccaccacacagctcatccagtcgtctatcctgggcaac
aacatcaacacagatagagacagagggagtggaggaggagggggaggaggagggggaggg
gagatgaacgagaaacacggctggaaacccaccccggttcagctgcagaagcaacaggaa
atgacctcacagcttcaccagtataacatcatggagcagaacaagctaaacaaggaccac
tatagaggaggggacagtcccatggcttccaccatcctctataaccaggcccacgaggcc
cacacagggggatcctacaacagctctgaccgcggcagcagcagcacctccgggagtcaa
ggtcaacagaagggagtgcgcacgcccaaactacccaaacagagcgcaatgaactgggct
gaccttctacctcctccccctgctaacccacctccctgccacaacatagaggagtactcc
ctgtccatggacgagagctatgacccagacatgcagtgctccctgcccccctcccgcatg
tacctgcagccagacgagctggaggaggaggaggaggaggaggaggaggagatggagagg
ggtcccactccacctgtcagaggggctgcctcgtcccccgccgcggtgtcctacagccac
cagtccacagccaccctcaccccctctccccaggatgagctgcaacccatgctccaagac
acagcagacagcgtgggctctggacacagacgcaatgcagtgagcccccctccccggccc
ctctccccctcacacacctacggctacatctccagccctctgtccctggacacagacggc
atggaggaagaggaggaggaggaggaaggggacgagacagacgcggaggtggccaaggtg
caccaccaccacacccacacccaccttccccacccccatcacccccagcagatgcacccc
aggaggctgctgctgcggggcctggagcagacgccagcctccagcatgggggacctggag
agctctgtgacgggctccatgatcaacggctggggttcggcatccgaggaggataacgcc
tcgtcagggcgctccagcgccgtcagctcctcagacggatccttcttcacagacgctgac
ttcgcccaggcagtcgcgtctgctgcagagtatgcaggcctgaaggtggccaagtacacc
aaccccacgcaaggccaggagggaggccccggaggacgaaagtatcaaatgaccccttca
ggtcaccgtcctggcagccccctgtccacagacagcaacatgagcacggccaacatgcag
aagaggcctcctaagaagcagaaacagcaccctgcagcgggccacccagggctccagcga
cgagaggccttccctgaagatctgcccccccctcccatcccccctccagcggggctcaag
tcccccacacacccctccaagacagccctggagacccggggggtgatgtcccccaaggca
ggcgagggcagggacaggagagggggctcaggaggagggtaccggccacgggagggatcg
gacccccgtactagctcctcagagcgccgggagacccaggacagacagaaaaaccctcgc
gcagggaaagggaacaaacaggaggggggcagcaccaaggcacgccaacacccaggacca
gaggacatcctgccctacagccgcccctccttccccacggtccacagtccccgagacagg
gaccccagatcctccagctctacgtcctcccggggctcaggggggcggcggagaggagag
gggggggcaggggcccgcaggaaccctaacgagatgggcctcaacaccatgggggccttc
cagccaggagacgatgacttagagatggtggagagctga
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