Salmo trutta (river trout): 115206932
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Entry
115206932 CDS
T08542
Name
(RefSeq) transcription factor Sox-9-A isoform X1
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115206932
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115206932
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115206932
NCBI-ProteinID:
XP_029629919
LinkDB
All DBs
Position
1:complement(71947526..71951755)
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AA seq
490 aa
AA seq
DB search
MNLLDPFLKMTDEQEKCFSDAPSPSMSDDSVGSPCPSGSGSDTENTRPSDNHLLLGPDGV
LGEFKKADQDKFPVCIRDAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQ
AARRKLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPR
RRKSVKNGQSEPEDGEQTHISSGDIFKALQQADSPASSMGEVHSPGEHSAGQSQGPPTPP
TTPKTDLAAVKADLKREGRPLQEGTGRQLNIDFRDVDIGQLSSDVISNIEAFDVNEFDQY
LPPHGHPGMPGVNGAQTGYTSSYRGIGASSIGQVGAAGHGWMSKQQQQHSISTLSGGGGI
GGEQGQSQGRTTQIKTEQLSPSHYSEQQGSPPQHVTYGSFNLQHYSASSYPSITRAQYDY
SDHQGGANSYYSHAGAQGSGLYSFSSYMSPSQRPMYTPIADPTGVPSVPTQTHSPQHWEQ
QPVYTQLSRP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaatctactcgaccccttcctgaagatgaccgacgaacaggagaagtgtttctctgac
gctccaagccccagcatgtctgacgattcggtcggctcgccgtgcccgtccggctccggt
tccgacaccgagaataccaggccgtccgataaccatctcttactgggtccagacggcgtg
ctcggcgagttcaagaaggctgaccaagacaagttcccagtatgtatcagagatgcggtg
tctcaggtgctgaagggttacgactggaccttggtgcctatgcccgtccgagtgaacggc
tccagcaaaaacaagccccatgtcaagagacccatgaacgctttcatggtgtgggctcaa
gccgcccggaggaaactggcggaccagtacccacatctccacaatgcagaactcagcaaa
accctcgggaaactctggagattactcaacgaaggcgagaagcgtccgttcgtagaggag
gctgaacgcttgagggtgcagcacaagaaagatcaccccgactacaagtaccagcccaga
aggagaaaatccgtgaagaacgggcagagcgagccagaggacggcgagcaaacccacatc
tcttccggtgacatctttaaagctctccagcaagccgactcacccgcgtccagcatgggc
gaagtgcattctcccggtgaacattcagcaggccagtcccagggcccacctacaccaccg
accacccccaaaacagacctggctgcggtcaaggccgacctgaagcgtgagggccgcccc
ctgcaagagggcacaggccgccagctcaacatcgacttccgggacgtggatatcggccag
ctgagcagcgacgtcatctccaacatcgaggccttcgatgtcaatgagttcgaccagtac
ctgccaccccacgggcaccccggcatgcctggcgtcaacggcgcccagacgggctacacg
agcagctaccgcggcatcggcgccagctccattggccaggtgggtgctgcaggacatggc
tggatgtccaagcagcagcagcagcactccatctccaccctgagtggaggtggaggtatt
gggggagagcaaggccagagccaagggagaaccactcagataaagacggagcagctgagc
cccagccactacagtgagcagcagggctcccctccccagcatgtcacctatggttcattc
aacctgcagcactacagcgcttcatcctacccctccattacccgcgcccagtatgactat
tctgatcaccagggcggcgccaactcttattatagccatgcaggtgcccaaggctcaggg
ctctattccttcagcagctatatgagcccaagccagagacccatgtatacccccatcgcc
gaccccaccggagtgccctcggtgcccacccagacccacagtccacagcactgggagcag
cagcctgtctacacccagctctccaggccctga
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