Salmo trutta (river trout): 115207197
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Entry
115207197 CDS
T08542
Symbol
thoc7
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
stru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115207197 (thoc7)
09122 Translation
03013 Nucleocytoplasmic transport
115207197 (thoc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115207197 (thoc7)
03041 Spliceosome [BR:
stru03041
]
115207197 (thoc7)
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
115207197 (thoc7)
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
115207197 (thoc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
Motif
Other DBs
NCBI-GeneID:
115207197
NCBI-ProteinID:
XP_029630031
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All DBs
Position
14:24422877..24428165
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AA seq
214 aa
AA seq
DB search
MGAVTDGDFIWKHLLIDGDGAGDNQSINVLLKNFTKWCNSTGLPEEGFTQYQRMLGTXAQ
CQFSMEKTLLVYDMNLWXMESYEKIYTDIKQNITSAHDTXSEXQKEIQRAKRIQNNQQCE
VDRVHFKIAKIVVSNPRRLEAXQNVDTFFLDKELQQLSHIKENVGNKLELRKKQFHVLLC
TIQELQQTLESRYQLMMTVARNYSVSKQMTVARH
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgtaactgatggagattttatttggaaacatcttctcattgatggagacgga
gctggagacaaccaaagtatcaatgttcttttgaagaactttactaaatggtgcaattca
actgggttgcctgaagaaggatttacacagtaccagaggatgttgggtacataggcacaa
tgtcaattctcaatggagaagaccttgctggtgtatgacatgaacctctggtaaatggaa
agctatgagaaaatatacactgacataaaacaaaacataacatcagcacatgatacanaa
tcagaatgacaaaaggagatccagagggcaaagagaatccaaaataatcagcaatgtgag
gttgatcgggtacacttcaagatagccaaaattgtagtgtcaaacccacgaagactcgag
gcttaacaaaatgtggacactttttttcttgacaaagagcttcagcagctgtcccacatc
aaagagaatgtgggaaataagctggagttgaggaagaaacagttccatgtgctcctctgt
accatccaggaactacaacagacactggagagtagatatcaactgatgatgactgtagcc
aggaactacagcgtaagtaaacagatgactgtagcaagacactga
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