Salmo trutta (river trout): 115207312 Help Entry 115207312         CDS       T08542                                  Name (RefSeq) collagen alpha-1(II) chain-like   KO K19719   collagen type II alpha Organism stru  Salmo trutta (river trout) Pathway stru04510   Focal adhesion stru04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:stru00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115207312  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     115207312  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:stru00536]     115207312 Glycosaminoglycan binding proteins [BR:stru00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    115207312 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  115207312 NCBI-ProteinID:  XP_029630163 Ensembl:  ENSSTUG00000005142 LinkDB All DBs Position 14:7853399..7892659 Genome browser AA seq 1140 aa AA seqDB search LPSPPPLSIGPVGPAGAPGFPGSPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGAS GNPGTDGIGGSKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGTSGDPGIPGFKGEA GPKGELGPAGPQGALGPAGEEGKRGPRGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGPK GAPGERGVGGVSGPKGAGGDPGRPGEPGLPGARGLTGRPGDTGPQGKVGPGGAAGEDGRP GPPGPMGARGQPGVMGFPGPKGANGEPGKGGEKGLLGAPGLRGLPGKDGETGAAGPPGPA GPAGERGEQGQPGPSGFQGLPGPPGPPGEGGKPGDMGVPGEGGAAGATGPRGERGFPGER GGAGPQGLQGPRGLPGTPGTDGPKGAIGPGGASGAQGPPGLQGMPGERGASGIPGPKGDR GDNGEKGPEGASGKDGSRGLTGPIGPPGPAGPNGEKGESGPSGPSGAAGARGAPGDRGET GPPGPAGFAGPPGSDGQPGAKGEQGEGGQKGDAGAPGPQGPSGAPGPSGPTGVSGPKGAR GAQGPPGATGFPGAAGRVGPPGPNGNPGAAGPSGPAGKDGPKGVRGDGGPPGRQGDAGLR GAAGAPGEKGDAGEDGPSGPDGPSGPSGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQ GAPGGSGDRGPPGPVGPPGLTGPAGETGREGNAGSDGPPGRDGSTGIKGDRGNTGPAGAP GSPGANGSPGPVGPTGKQGDRGEAGAQGPAGPSGPAGARGMAGPQGPRGDKGEAGEGGER GQKGHRGFTGLQGLPGPPGQSGDQGASGPAGPSGSRGPPGPVGPSGKDGSNGIPGPIGPP GPRGRSGETGPSGPPGNSGPPGPPGPPGPGIDMSAFAGLSQPEKSPDPLRYMRADQASGN LRTHDAEVDATLKSLNNQIENIRSPEGSKKNPARTCRDLKLCHPDWKSGEYWIDPNQGCT IDAIKVYCNMETGESCVYPKPASIPKKNWWSSKSKAAKHVWFGETMNGGFHFSYGDDSLA ANTASVQMTFLRLLSTEASQNLTYHCKNSVAYMDGATGNLKKAVLLQGSNDVEIRAEGNS RFTYAVMEDGCTKHKGTWGKTVIEYRSQKTSRLPIVDIAPVDIGGADQEFGVDVGAVCFL NT seq 3423 nt NT seq  +upstreamnt  +downstreamnt ctcccctctccccctcctctctctataggcccagttggtcctgctggtgctccaggcttc cccggctctccaggttctaagggagaagctggccccaccggtgctcgtggacctgagggc gctcagggaccccgtggagagtcaggaacccctggatctcccggacccgccggtgcatct ggtaatcctggtactgatggtattggaggatctaaaggatcagctggtgctcctggtatc gctggcgcgcctggcttcccagggccccgtggccctccaggaccccagggagccactgga cctctcggaccaaagggaacatctggtgaccccggtatcccaggtttcaagggtgaggct ggacccaagggagagcttggaccagccggtccccaaggagcccttggccctgcaggagag gaagggaagaggggacccagaggagagcccggcgctgctggacctcttggacctcccgga gagagaggcgcccccggtaaccgtggtttcccaggtcaggatggcctggctggtcccaag ggagcccctggcgagcgtggagtcggcggcgtgtctggccctaagggagccggcggtgac cctggacgccctggcgagcccggtcttcctggcgcaagaggtcttactggtcgtcctggc gatactggtcctcaaggcaaagttggacctggtggtgctgctggtgaggatggtcgcccc ggaccccctggccctatgggagcccgcggtcagcctggtgtgatgggattccccggaccc aagggagccaacggtgagcctgggaagggaggagaaaagggacttcttggtgccccaggt ctgaggggtcttcctggaaaggatggtgagacaggagctgctggaccacctggccctgct ggccctgctggagaaagaggagagcaaggacagcctggaccttctggcttccagggtctg cccggacctcccggcccacctggtgagggaggcaagcccggtgacatgggtgttccagga gagggtggagctgctggtgccactggacccagaggtgagcgtggtttcccaggagagaga ggaggtgctgggcctcaggggctgcagggacctcgtggtctgcctggaactcctggaact gacggacccaagggagcgatcggaccaggtggggcatcgggtgcccagggaccccccggt ctgcagggtatgcccggagagagaggagcctcgggcatccccggacctaagggagacaga ggtgacaacggagagaagggacctgagggtgcttctggcaaagacggctcaagaggtttg actggtcccattggtcctcccggcccagctggtcccaacggagagaagggtgaatctggt ccatctggaccttccggtgctgctggtgcccgtggtgctcctggagacaggggtgagacc ggacctcctgggcctgctggcttcgctgggcctcctggatctgatggtcagcccggagcc aagggagagcagggagagggcggccagaagggagacgctggtgctcctggaccccaggga ccctctggagctcctggaccttccggacctactggcgtttctggacctaaaggtgctcgc ggtgctcagggaccccctggtgccactggtttccctggcgctgccgggagagtcggacca cctggtcccaacggtaaccctggtgctgctggtccttctggccctgctggtaaagatggt cccaagggtgtgcgtggagacggtggacccccaggcaggcagggagacgctgggctgcgt ggagccgctggagcccctggagagaaaggagatgctggagaggatggtccctctggtccc gatggtccttcaggtccttcaggtctggctggacagcgtggtattgttggtcttccagga cagcgtggagagagaggtttccctggcttgcccggaccctctggagagcctggtaaacaa ggagctcctggtggaagcggagaccgtggaccccctggcccagtgggaccccctggactg actggacccgctggagagaccggtagagagggcaacgctggttctgatggaccacccggt agagatggatccactggaatcaagggtgaccgtggtaacaccggtcctgctggtgctcct ggctccccaggtgctaatggttcccccggtcctgtcggccccaccggcaagcaaggagac aggggagaggctggagctcaaggaccggctgggccttccgggcctgctggagccagagga atggctggaccccaaggaccccgtggagacaagggtgaggctggagagggtggcgagaga gggcagaagggacacagaggattcactggtctgcagggtctgcccggacctcccggtcaa tctggagaccagggtgcctctggacctgccggaccaagtggatcaagaggacctcccgga cctgttggtccctctggaaaggatggttccaatggtatccccggccccatcggacccccc ggaccccgtggtcgctctggagagacaggcccctctggtccacctggaaactctggaccc cctggtcctcctggtcctcccggccctggtatcgacatgtctgccttcgctggtctgtct cagcctgagaagtcccccgatcccctgaggtacatgagggccgaccaggcctccggaaac ctgaggacgcacgacgccgaggtggacgccacgctcaagtccctcaacaaccagatcgag aacatccgctcccccgagggctccaagaagaaccctgcacgtacttgcagagacctgaag ctgtgccaccccgactggaagagcggagagtactggatcgaccctaaccagggctgcacc atagatgccatcaaggtctactgtaacatggagactggagagtcctgcgtctaccccaag cccgccagcatccccaagaagaactggtggtccagcaagagcaaggctgccaaacacgtc tggttcggagagaccatgaacggaggattccacttcagctatggtgatgacagtctggca gccaacactgccagcgtccagatgaccttcctgcggctgctgtccaccgaggctagccag aacctcacctaccactgcaagaacagcgtggcctacatggacggggccacgggcaacctg aagaaggccgtgctgctccagggctccaacgacgtggagataagagctgagggcaacagc cgatttacatacgccgttatggaggacggctgcacgaaacataaaggaacgtggggaaag acagtgattgagtacagatcacagaagaccagccggctgcccatcgtggacattgctcct gtggatattggaggagcggaccaggagtttggtgttgacgtcggcgcagtttgcttcttg taa

DBGET integrated database retrieval system