Salmo trutta (river trout): 115207338
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Entry
115207338 CDS
T08542
Name
(RefSeq) zinc finger protein GLI1-like isoform X1
KO
K16797
zinc finger protein GLI1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
115207338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115207338
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
115207338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
zf-C2H2_4
Zap1_zf1
FOXP-CC
Motif
Other DBs
NCBI-GeneID:
115207338
NCBI-ProteinID:
XP_029630207
Ensembl:
ENSSTUG00000006004
LinkDB
All DBs
Position
14:complement(8668279..8687980)
Genome browser
AA seq
1486 aa
AA seq
DB search
MYNPMTPNPMTPNPRTNPNSGVNPMDQYMRPPLAPPLHSMMGHRGMNQSSDGVNSSPYCQ
NNLMSSHYGFPHGHGSDHMGGGSRFSTPRSMLKLSKKRALSISPLSDASMDLHTVIRTSP
NSLVAFVNSRCGPDGGSSYGHLSVGAMSPSMGLSNSMNYQSRQHGSMYSGHTPGPCHAPP
TRIPPHNPPLHTPKHGHLKTEPGLGSVMDGISIKCLDERSEGDLASPSSNGTQDPLLGLL
DCREDLEREEKPEPEVIYETNCHWESCSKEFDTQEQLVHHINNEHIHGEKKEFVCHWQEC
SREQRPFKAQYMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEH
EGCNKAFSNASDRAKHQNRTHSNEKPYVCKISGCTKRYTDPSSLRKHVKTVHGPEAHITK
KHRGDTGPRLPGSSLTSGGQRGELLLEKEETGHREDCKLLAPESTLKSQPSPGGQSSCSS
ERSPLGSANNNDSGVEMNLNAAGSLEDLTALEDGGAGGGCEAGGSGAGMGGMSAHALKRL
ENLKIEKLKQIRRPTPPGRCGGGNKLPALTGEMMGGMCSPSALLSNRRVMELSNHELGGG
SSGMVCPISDRRGSGTSSMSSAYTVSRRSSMVSPYLSSRRSSDVSQLGGGAGFLGSDQGG
SDPLPPETSCRGGPCRGVGGTGGGLPEMSSLTPAQQYSLKAKYAAATGGPPPTPLPSMEQ
GPGTARRRGGFLSEFQGQPLPAFLQYGGPRRQSANTGEYGTGVIYPHQAPGNGTRRSSDP
VRSTGNPHALPKVQRFNSLNNLAMMGRRNALQHCGSDANITRHMLSPRPPSITENVMMEA
MAMDAHGGTVDARDHGMMLPPGERGFLGYQNHHMGGPSSQLSPSHDSLGCPEQGYQRATE
TSMQGVHYQGTTRGPGQGQMGQGGPIHPEEMSSTLLQQAEYSMSTCQLSPSEPHYPHLGQ
AGPDGGAGPWEESSQVQTPHRTLQTGMQYQDQGSMQGQTQTQGLYSSQQSLYTQGPDGGH
QNLNIKPEQQQYHPALANPDACQKQLHQHQQQRPHPGQTPMPMGPMSPQSYPQQGQPGQG
MMRTTNPSCNFHGGGMENQNQASMQQGQQQIGGLIVGSAGLGPGGRSQTPMMHVKEMMVR
NYVQSQQALLWGQEQDQSGIAAEGKLLPLSDSMDMTGQQVAMMQQQQPSPQHHQHQPQQQ
HQQNLYPNPDSSFPGYSTNQNLMIPLGHSRGGPGSGSSIPPNEVPMMSLPGRPGSCYSQE
MGVPVVPRPPQGRKPLIRQNSLQSLPEGGYLGSPPHLSPVQSTSSTRRAVRLPPVQGPQT
DQEIFSPSNNSNMYYSGQIHMQHPDMDKQQIQIQRITHPHQDPTQTGPCLNQHQGHLVTH
MDHQRNKSAQLGYPHESTPISNALENVDLDNAQIDFTSIIDDPDPSSFSPVNPPLHGGSS
QTSSRLTTPQTSTTLPSSVLPNMAVGDMTSMLTSLADENKYLNTLS
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaccctatgacacctaaccccatgaccccaaaccccaggactaaccctaactct
ggggtcaaccccatggaccagtacatgcggccccctctggcccccccactgcacagcatg
atgggacaccgcggcatgaatcagtcctccgatggtgttaacagctccccctactgtcag
aacaacctcatgtcatcccactatggcttcccccacggacacggatcagaccacatggga
ggcggttcgcggttctccacgcctcgctccatgctgaagctgagtaagaagcgtgctctg
tccatctctcctctgtcggacgccagcatggacctccacacggtcatcaggacctctcct
aactcactggtggcatttgtcaactcacgctgtggacccgatggaggctcctcctacgga
catctgtctgttggtgccatgagtccgtctatgggtctctccaactccatgaactaccag
tccagacaacatggctcaatgtacagcggacacaccccaggaccctgccacgcacctccc
accagaatacccccacacaaccctccactacacacacccaaacatggacacctgaagaca
gaacccggactgggcagtgtgatggatgggatcagtattaaatgtctggacgagaggtcc
gagggagacctggccagcccttcttccaatggcacacaggatcctctgctgggtctgctg
gactgccgggaggatctggaaagggaggagaaaccggagccagaggtcatctacgagaca
aactgccactgggagagctgcagcaaggagtttgacacgcaggagcagctagtgcaccac
atcaacaatgagcacatccacggagagaagaaggagtttgtgtgccactggcaggagtgt
tccagggagcagagacctttcaaagcccagtacatgctggtggttcacatgcgcaggcac
acaggagagaaaccacataagtgtacttttgagggctgtaataaggcctactctcgcctg
gagaacctgaagacccacctgaggtctcatacaggggagaaaccatacgtctgtgaacat
gagggctgcaacaaagccttttccaacgcctcagacagagccaagcatcagaaccgcaca
cattccaacgagaagccttacgtgtgtaagatctctgggtgtacgaagcgctacacagac
cccagctctctgcggaagcacgtgaagactgtccatggccctgaggctcacatcaccaag
aagcatagaggagacactgggccccggctgcctggctcatcactgacctctggtggacag
cgtggtgaactgctgctggagaaagaggagactggacacagggaggactgcaaactgctg
gcacctgagagcactctgaagtctcagcccagcccgggtggccagtcttcctgcagtagc
gagcgctctccactggggagcgccaacaacaacgacagcggtgtggagatgaacctgaat
gcagctggcagtctggaggacctgaccgctctggaagacggaggggcaggaggaggctgc
gaggcagggggctcaggggcagggatggggggcatgtcagcacatgccctgaagagacta
gagaacctgaagatagagaagctgaaacagatcagaaggccaactccgcccggacgctgt
ggtggggggaacaagctgcctgcactcacaggggagatgatgggagggatgtgttctccc
tcggccctcctctccaaccgccgagtcatggaactgtccaatcacgagctggggggtgga
tcctctggcatggtctgtcctatcagtgaccggagggggagtggcaccagcagcatgagc
tcggcctacacagtgagccgtcgttcttccatggtttccccctacctctccagccggcgc
tccagcgacgtctcccagctaggaggaggagcagggttcctgggttctgaccagggagga
agtgaccccctcccccctgagaccagctgcagaggaggaccctgccgtggtgtaggtggg
acaggaggagggttaccagaaatgtctagtctaacgccagcccagcagtacagcctgaag
gctaagtatgcagcagccactggcggcccaccccccactccactacccagtatggagcag
ggaccaggaacggcgaggaggagaggaggcttcctcagcgagttccagggtcagccgctg
ccagcgttcctgcagtatggcggtcccaggagacaaagtgccaacacgggagagtatggc
actggtgtcatctacccccaccaagccccagggaatggcacccggcgctccagtgacccc
gtccgctccactggcaacccccatgcccttcccaaggtgcaacgcttcaatagcctgaac
aacctggccatgatgggccggaggaacgccctgcagcattgtgggtcagacgccaacatc
acccgccatatgttatctccgcggccacccagcatcactgagaacgtcatgatggaggcc
atggccatggacgcacatggtggaaccgtggatgccagggaccatggcatgatgcttccc
ccaggagagagaggcttcctgggctaccagaaccaccacatggggggtccctccagccag
ttatcacccagccacgacagcctgggctgcccagagcagggctatcagcgagcgacagag
acgtccatgcagggtgtgcactaccagggtactaccaggggaccaggccagggccagatg
gggcaagggggacccatccacccagaggagatgtctagcaccttgctacagcaggctgag
tacagcatgagtacctgccagctcagcccctctgaaccacactacccccacctgggccaa
gcagggcccgatggaggtgcagggccctgggaggagagcagtcaggtccagacccctcat
agaaccctccagacagggatgcagtaccaggaccagggctctatgcagggccaaacccag
acacagggtctctacagcagccagcagagtctgtacacccaaggcccagatggaggccac
cagaatctgaacatcaaaccagagcagcagcagtatcatccagcccttgccaacccagac
gcctgccaaaagcagctccaccaacaccaacagcagaggccccacccagggcagacacct
atgcccatgggacccatgtcccctcagagttacccccagcaggggcaacctggccaaggc
atgatgaggactactaacccctcctgtaacttccatggtggagggatggagaaccagaac
caggcctccatgcaacaggggcagcagcaaatcgggggcctcatcgtggggtcagctggt
ctggggcctgggggccggtctcagacaccaatgatgcatgtgaaggagatgatggtgagg
aactatgtgcagtcccagcaggctctgttgtggggtcaggagcaggaccagagtgggata
gcagcagagggaaaactccttcctctgtcagacagcatggacatgacaggacaacaggtg
gccatgatgcagcagcagcagcctagtccccagcatcaccaacaccagcctcagcaacaa
caccaacaaaacctctaccccaacccagactccagcttcccaggctattccaccaaccag
aacctgatgatccccctaggccatagccgaggaggccccggatccggctcctccatccca
cctaatgaggtccccatgatgagcctgcctggacggccagggtcctgctacagccaggaa
atgggagtccctgtggttcctagaccaccccagggccggaagcctctcatcaggcagaat
agcctccagtccctgccagaaggagggtacctgggcagtcctccacacctcagcccagtc
cagtctacctccagcacaaggagagcagtccgactgccccctgtccagggccctcagacc
gatcaggagatcttctctccctccaacaatagcaacatgtattactcgggtcagatccac
atgcagcaccctgacatggacaagcagcagattcaaatccaacggatcacccatcctcac
caggacccaacccagaccgggccctgcctcaaccagcaccaggggcacctggtaacccat
atggaccatcagaggaacaagtctgcccagctgggctacccccatgagtccacccccatc
tccaatgctctggagaacgtggatctggataatgcccagatagactttacctccatcatt
gatgacccagacccctcgtccttcagccccgtcaacccacctctccatggaggttcatcc
cagacctcgtcccgtctcaccaccccacagacctccaccaccctgccctcatctgtgctc
cccaacatggctgtaggggacatgacctccatgctcacctctctggctgatgagaacaag
tacctaaataccctgtcttag
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