Salmo trutta (river trout): 115207343
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Entry
115207343 CDS
T08542
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru00260
Glycine, serine and threonine metabolism
stru00630
Glyoxylate and dicarboxylate metabolism
stru00670
One carbon pool by folate
stru01100
Metabolic pathways
stru01200
Carbon metabolism
stru01230
Biosynthesis of amino acids
stru01240
Biosynthesis of cofactors
stru04981
Folate transport and metabolism
Module
stru_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
115207343 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
115207343 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
115207343 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
115207343 (shmt2)
Enzymes [BR:
stru01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
115207343 (shmt2)
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GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
115207343
NCBI-ProteinID:
XP_029630222
Ensembl:
ENSSTUG00000008201
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All DBs
Position
14:9240941..9263808
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AA seq
527 aa
AA seq
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MVSTFSFSWKKRRDLSGAQAELSLPTHQLIRVPKQPLCLRAPVALSSVGVRRGQHAATRS
VEQEAPWTGQDSLAQDDPEMWDLLRKEKDRQCRGLELIASENFCSRAALEAQGSCLNNKY
SEGYPGRRYYGGAEVVDQIELLCQKRALEAFDLDPALWGVNVQPYSGSPANFAAYTAVLN
PHDRIMGLDLPDGGHLTHGYMSDTKRISATSIYFESMPYKLNPATGLIDYDQLEMTARLF
RPKLIIAGTSAYARLIDYARIKKLCTEVKAYLLADMAHISGLVAAKAVPSPFKYADMVTS
TTHKSLRGARAGLIFYRKGVRSVDKKGREIQYDLEDRVNFAVFPSLQGGPHNHAIAGVAV
ALKQAQTPMFREYIGQVMRNSKAMAEALLSKGYTLVSGGTENHLVLVDLRPKGIDGARAE
RVLELVSITANKNTCPGDKSALAPGGLRLGAPALTSRQFKETDFVQVVEFMDEGFKIALD
VKKKTGKLADFKNFLLEDPETVARMSELRKRVEAFARPFPMPGFEDH
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggtcagcaccttttccttcagctggaagaagaggagagacttgtctggagcacaggct
gagctcagtctacccactcaccagctcatcagagtccccaaacagccattgtgcctgcgt
gccccggtggccctgagcagcgtgggggtgaggaggggccagcatgcggctacccgtagt
gtggaacaggaggccccatggactgggcaggacagtctggcccaggacgacccagagatg
tgggacttgctgcggaaagagaaggaccggcagtgtcggggactggagctcattgcctct
gagaacttctgcagtcgggctgcgctggaggcccaaggatcctgcctcaataacaagtac
tcagagggctacccaggcaggaggtactatggtggagctgaggtggtggaccagatagag
ttgttgtgccagaagagagccctggaggcctttgacctggaccctgccctgtggggggtg
aacgtccagccctactctggctctcccgccaacttcgctgcctacaccgccgtcctcaac
cctcacgaccgcatcatgggcctggacctgcctgacggtggacatctgacccatggttac
atgtctgacaccaagaggatatctgctacctccatctattttgagtccatgccctacaag
ctcaatcctgccacagggctcattgactatgaccagctggagatgactgcccgtctcttc
cggcccaagttgatcattgcaggcaccagcgcctacgctcgcctcattgactacgctcgc
atcaagaagttgtgtacggaggtgaaagcctacctgctggctgacatggcccacatcagt
ggtctggtggctgcgaaggctgtcccctcgcccttcaagtatgctgacatggtcacgtcc
acaacacacaagtccctccgaggagccagggctggtctgatcttctaccgtaagggtgtg
cgttctgtggacaagaaggggagggagatccaatatgacctggaggaccgggtcaacttc
gctgtgttcccctctctgcaggggggaccccacaaccacgccatcgctggggtggccgtc
gcactcaaacaggcccagacgccgatgttcagagagtacattggccaggtgatgcgtaac
tccaaagccatggctgaggccctactgagcaaaggatacacgctggtgtcaggggggacg
gagaaccatctggtgctggtggacctgaggcctaagggcatcgatggagccagagcagag
agagttttggagctggtgtccatcacagccaacaagaacacctgccctggggacaagagt
gccctggcgcctgggggcctcaggctaggtgccccggcgctgacctccagacagttcaag
gagacggactttgtccaggtggtggagttcatggatgaaggctttaagatcgccctggac
gtcaagaagaagactgggaaacttgcagactttaagaacttcttgttggaggatccagag
acagtcgcccgcatgtcagagctgaggaaacgagtggaggccttcgcacgtcccttcccc
atgcccggcttcgaggatcactag
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