Salmo trutta (river trout): 115207355
Help
Entry
115207355 CDS
T08542
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
stru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115207355
03015 mRNA surveillance pathway
115207355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115207355
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115207355
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115207355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HNF-1_N
Motif
Other DBs
NCBI-GeneID:
115207355
NCBI-ProteinID:
XP_029630238
Ensembl:
ENSSTUG00000009179
UniProt:
A0A673XMU6
LinkDB
All DBs
Position
14:complement(9659203..9667194)
Genome browser
AA seq
502 aa
AA seq
DB search
MSTDSWAQAVDEQEAAAESIGSLQIKDKPEENGTANTALAATTTTTTTTNTAAASATTPA
KAGGGEGDKTGDEDDKDDKAAQSLLNKLIRSNLVNTTNQVEVLQRDPNSPLYSVKSFEEL
RLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVD
PNNKFPQALCVSPTYELALQTGKVIEQMGKHYSEVKLVYAIRGNKLQRGTQLQEQVVIGT
PGTMLDWCLKFKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKQCQMLLFSATF
EETVWNFAQRIVPDPNIIKLKREEETLDTIKQYYVLCNSKEEKFMALCNIYGAITIAQAM
IFCHTRKTAGWLAGELSREGHQVALLSGEMQVEQRAAVIDRFRDGKEKVLVTTNVCARGI
DVEQVSVVINFDLPVDRDGNPDNETYLHRIGRTGRFGKRGLAINMVDSRFSMNVLNKIQE
HFNKKIEKLDTDDLDEIEKIAG
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacggactcctgggcccaggctgtggacgagcaggaggccgccgccgaatcgatt
ggtagcctacaaatcaaagacaagccagaggaaaatggtactgccaacactgcattggcg
gcgacgacaacaacaacaactacgacaaacacagcagcagccagcgccacaacgcctgca
aaggcaggaggaggagagggagacaaaacaggagacgaggacgataaagatgacaaggcg
gcacagtcgttattgaataagttgatacgcagtaatctagtgaacacaaccaatcaagta
gaagtcctacagagggatcccaactctccgctttactctgtcaaatccttcgaggaacta
cggcttaaacctcagctgctccagggagtgtacgccatgggcttcaaccgaccctccaaa
atccaagagaacgcgttacccatgatgctcgctgaacccccacagaacctgatagcccag
tctcagtcagggaccgggaagactgctgcctttgtcctggccatgctcagtcacgttgat
cccaacaacaagttcccacaggctctctgtgtgtctcctacctatgagctggccctgcag
acggggaaggtcattgagcagatggggaagcactactcagaggtcaaactagtctacgcc
atcagaggaaacaaactgcagagaggtactcagctccaggagcaggtggtgatagggacg
ccaggcaccatgctggactggtgtctgaagttcaagttcatcgaccccaagaagatcaaa
gtgtttgtcctggacgaagctgacgtcatgatcgctacacagggtcatcaggaccagagt
atacgcattcagaggatgttacccaaacagtgccagatgctgctgttctcggccacgttt
gaggagacggtgtggaactttgcccagcgcatcgtcccagaccccaacatcatcaagctg
aaacgggaggaggagacgctggacaccatcaaacagtactacgtcctctgtaacagcaaa
gaggagaagttcatggctctctgcaacatctacggggccatcaccattgctcaggccatg
atcttctgtcataccaggaaaacggcagggtggttggcaggtgagctgtcccgggagggc
caccaggtggcgctgctcagtggggagatgcaggtggagcagagagctgctgtcatcgac
cgcttccgagacggaaaggagaaggtcctggtcaccaccaacgtctgtgccagaggtatt
gacgtggagcaggtttccgtggtgataaactttgacctgccggtagacagagacggtaac
ccggacaacgagacgtacctgcatcggattggccgcacgggtcgttttgggaagcgggga
ttggccatcaacatggtggacagcaggttcagcatgaacgtcctaaacaagatccaggaa
cacttcaataagaagatcgagaagctggacacagatgatctggatgagatagagaaaatc
gcaggctga
DBGET
integrated database retrieval system
