Salmo trutta (river trout): 115207467
Help
Entry
115207467 CDS
T08542
Name
(RefSeq) Usher syndrome type-1G protein homolog
KO
K21878
Usher syndrome type-1G protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
115207467
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115207467
Cilium and associated proteins [BR:
stru03037
]
Primary cilia and associated proteins
USH complex and associated proteins
115207467
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_4
Ank_2
Ank
Ank_3
Ank_5
SAM_1
SAM_7
SAM_2
Motif
Other DBs
NCBI-GeneID:
115207467
NCBI-ProteinID:
XP_029630412
LinkDB
All DBs
Position
1:74094876..74121402
Genome browser
AA seq
484 aa
AA seq
DB search
MNDRYHKAARDGYLDLLKEATRKDLNAPDEDGMTPTLWAAYHGNLEALRLIVGRGGNPDK
CDIWGNTPLHLAAANGHHNCLSFLVSFGANVWCLDNDYHTPLDMAATKSHMDCVRYLDSI
AAKQSALNPKLVGKLKERAFREAERRIKECVKLQRKHHKRMERKFHKEAASEQSMSDAMS
FSSYTSSSVSRKLHHLNTTTVSVPYSQATLHATTRGKTKIQKRLEKRKQGDGTFKIYEDG
RKSVRSLSGLQLGNDVMFLKQGTYVGPRDRTGRRGNLRDIFHGDANDDAISRAISEPDLS
YRPDMEYSEVSTDSGHDSLFNRPGLGTMVFRRNYISGGLFGIGGRDEGSLSGGTERAGSA
NVRLLSRLRRSPSLDDGGDSIGSARSLQERNRQELPWDEVELGLDDDCEAVTSPLEVFLA
AQTMDEFLTVFRREKIDLEALLLCSDEDLKSIHIPLGPRKKILDACKRRLETLEDPDYIE
DTLL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaggtatcacaaggcggcccgggatggctacctggacctgctgaaagaggca
acgcggaaggacttgaacgcgccggatgaagatggcatgacaccgacgttatgggccgct
tatcatggcaacttggaggctctgcgacttatcgtgggcagaggaggcaaccctgataag
tgtgacatatgggggaacacacctctccacctggcggctgccaacggccaccacaactgc
ctgtccttcctggtgtccttcggtgccaacgtgtggtgcctggacaacgactaccatacg
cccctggacatggccgccaccaagagccacatggactgtgtccgctacctggactccatc
gccgccaagcagtcggccctcaaccccaagctggtggggaagctgaaggagcgggctttc
cgtgaggctgagaggaggattaaggagtgcgtgaagctgcagaggaagcaccacaagcgc
atggagcgcaagttccacaaagaggcggcgtcggagcagtccatgtcagatgccatgagc
ttctccagctacacaagcagctcagtgagccgcaagctgcaccacctaaacaccaccact
gtcagtgtgccatactctcaggctactcttcacgccacaacccgaggcaagaccaagatc
cagaagaggttggagaagaggaagcaaggagacgggaccttcaagatctacgaggacggc
aggaagagcgttcgctccctctcgggcctccagctgggcaacgatgtcatgttccttaaa
cagggaacctatgtcggccctcgggaccgcacagggcgccgcggcaacctccgagacata
ttccacggagacgccaacgacgacgccatctctcgtgccatcagcgagccggacttgtct
taccggcccgacatggaatactctgaggtcagcaccgactcgggccacgactctctcttc
aaccggcccggtctgggaaccatggtgttccgacgcaactatatcagtggcggcctgttc
ggcatcggcgggcgtgacgaggggagcctcagcggaggaactgaacgggctggcagcgcc
aacgtgcggctgctcagccggctgaggcgttcgcccagcctggacgatgggggggacagc
atcggcagtgcccgcagcctccaggaaaggaaccgccaggagcttccctgggacgaggtg
gagctggggctggatgatgactgcgaggccgtgaccagcccgttggaggtgttcttggct
gcgcagaccatggatgagttcctcaccgtcttcaggcgggagaagattgacctggaggca
ctgctgctgtgctcggacgaggacctcaagagcatccacatccccctggggcccaggaag
aaaattctggatgcctgcaagagacgtctggagacccttgaggaccctgactacatcgag
gacaccctgctgtga
DBGET
integrated database retrieval system
