Salmo trutta (river trout): 115207482
Help
Entry
115207482 CDS
T08542
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04260
Cardiac muscle contraction
stru04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115207482
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115207482
04261 Adrenergic signaling in cardiomyocytes
115207482
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115207482
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115207482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
Cache_3-Cache_2
dCache_2
sCache_2
Motif
Other DBs
NCBI-GeneID:
115207482
NCBI-ProteinID:
XP_029630434
Ensembl:
ENSSTUG00000025927
LinkDB
All DBs
Position
14:complement(15115824..15383704)
Genome browser
AA seq
1132 aa
AA seq
DB search
MAICAQSYGIFCLFSIQTILIISLSSPATGSLRFPQHYTMMHWAGRIEKELEKTIQLVTG
TQQIRGIYNEKKSQFDIKRNNPKDLVERVARDIAKLLTSKRRALERLAREAEQLQTDFPW
LDSIKESDMEYYDSKAESDYTEDGDGEENLMENPYSMKLEFVDDPNFKNKVNYSYSAVQI
PTDIYKGSPVILNELNWTQALERVFIDNRREDSSLRWQVFGSATGVTRYYPATPWRAPNK
IDLYDVRRRPWYIQGASSPKDMIIIVDVSGSVSGLTLKLMKTSVMEMLDTLSDDDYVNVA
RFNEKADAVVPCFKTLVQANMRNKKIFKESIMHMQAKGTTDYKSGFQFAFEQLLNDTGAP
RAGCNKMIMMFTDGGEDRAQDIFEKYNWPNKTIRVFTFSVGQHNYDVTPLQWIACANKGF
YYEIPSIGAIRINTQEYLDVLGRPMVLAGPKAKQVQWTNVYQDALGLGLVITGTMPVFNL
TADANSQTQLVLGVMGVDVAINEIKRKTPTYRLGANGYTFAIDQNGYLLLHPNLQPKVGS
RLSSMHPILQPKIINFREPVTLDFLDAELEDSKKEEIRREMIDGKSGQKKIKTLIKSVDE
RYIDEAMRTYTWTPVEGTDYSLGLVLPTYSENHIKANLSDQILQVQLQYTKDFESLLPNS
FESEGHVFIAPREYCNELELSNNNTEFLLNFIALMEKVTPDSKQCDNLLLHNLILDTGII
RQLVEKVWKTKDLTTYGFLAVFAATDGGITRVFPNKAAETWEEDPEPFNASYYRRSLDNK
GYIFRAPYRTVNDELLNPENDTIGILVSTAVEITVGGKTIKPAVVGVKLDLEAWVDKFKI
LASNQTSPTSDNRQVQQTCGPTSGCEMDCEANSEDLLCYLVDDGGFLIMSNQKDHWNKIG
MFFSEVDPYLMHALYNNSFYNRKQSFDYQSVCDPVPSSNTGAAPRVVFVPTIADFVNLAW
WSSAAAWSLFQQLLYGMVYHSWFVTDEVEAEGMDSRETSCVTIQTQFYFTNINSSYDILQ
DCGNCSRLIHAKRLNNTNLLFVVAEKMPCNTCEVEKLSQAETEFKEDNPSCEDMSAARYR
KGPAVCYDYNLSENTSDCGRGHSFRPSLQTLLMIQLFLLYPIASPHFLPLLL
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctgcgctcagtcctacggtatattctgtctgttctcaatccaaactatcctc
atcattagcttatcttcgccggcaacggggagcctccgcttcccccaacactacacaatg
atgcattgggcaggccgcattgagaaggagctggagaagactatacagttggtcactgga
acccagcagataagagggatttacaatgagaagaagagtcagtttgacatcaagaggaac
aatcccaaggacctggtggagagggtggcacgagacatcgccaagctgctcactagcaag
aggagagccctggagaggctggccagggaggcggagcagctgcagacagattttccctgg
ctggacagtatcaaggagagcgacatggagtactatgattcgaaagcggaatcagactat
acggaggacggagatggggaagagaacctgatggagaacccctactccatgaagctggag
tttgtggacgatcccaactttaaaaacaaggtcaactactcctacagcgccgtccagatc
cccacagacatctataagggctcaccagtcatcctgaatgagctgaactggacccaggct
ctggagagggttttcattgataaccgccgggaggacagctctctgcgctggcaggtgttc
ggcagcgccacgggggtcacaagatattacccagccactccatggagagcacccaataag
attgacctgtatgacgtccgcaggcggccatggtacatccaaggggcatcatctcccaag
gacatgatcatcatcgtggacgtgagtggcagtgtcagcggactcactctgaaactgatg
aagacgtcggtcatggaaatgctagacactctgtcagatgacgactatgtgaatgtagcc
aggtttaacgagaaggctgatgctgtcgtcccctgttttaagaccttggtccaggccaac
atgagaaacaagaagatcttcaaggagtctatcatgcacatgcaagccaaaggaaccact
gactacaagtctggcttccagttcgcctttgaacagctactcaatgataccggcgccccg
agggcgggctgcaataagatgataatgatgtttacagatggaggagaggatcgtgcacag
gacatctttgagaagtacaactggcccaacaaaaccattcgagtatttaccttttcagtc
gggcagcacaactatgatgtcacccccttgcagtggatagcttgtgccaacaaaggattc
tactacgagattccatccattggagccatcagaattaacacgcaggagtacctggatgtg
ctgggtcggcccatggtgctggctgggcccaaggccaagcaggtccaatggaccaacgtc
taccaggatgctctgggtctgggtctggtcataactgggaccatgccagtcttcaacctc
accgctgatgcaaactctcagacgcagcttgtccttggtgtcatgggagtggatgttgca
atcaacgaaattaagaggaagacaccaacatacaggcttggagccaatggatacaccttt
gcgatcgaccaaaatggctatttgctcctgcaccccaacctgcaacctaaggtaggatca
agactgtcctctatgcatcccatcctgcaacctaagatcattaacttcagagaacctgtc
accctggacttcctggatgctgaactagaggacagtaaaaaggaggagatccgtcgagaa
atgattgatggcaaatcagggcaaaagaaaatcaagactctcattaagtcagttgatgag
aggtacattgatgaggccatgcggacatacacctggactccagtggagggcacagattac
agtctagggctggtactgcccacatacagtgagaaccacatcaaggctaacctgagtgac
cagattctgcaggtgcagttgcaatacaccaaggattttgaatctctgctgccaaacagt
tttgagtctgaaggacatgtattcatagctcccagggaatactgcaacgagctagagctc
tccaacaacaacactgagttcctgctcaacttcatcgctctcatggagaaggtgacacct
gactccaaacaatgtgacaacctgctccttcataacctcatcctggacactggcatcatc
agacagctggtggagaaggtgtggaagaccaaagacctcaccacatatggctttctggca
gtgtttgctgcaacagacggagggattacaagagtgtttcccaacaaggctgctgagacc
tgggaagaggaccctgagccttttaatgccagctattaccgccgcagtctggacaacaag
ggctacatcttcagagcgccttatcgcaccgtgaatgatgagctgttaaacccagagaac
gacaccataggaatcctggtcagcactgcagtggagatcacagtgggagggaaaaccatc
aaacctgcagtggttggagtaaagctggaccttgaggcctgggtggacaaattcaagatc
ctggctagcaaccaaacaagtccaacaagtgacaaccgccaagtccaacaaacgtgtgga
ccaaccagtggttgtgagatggactgtgaagccaacagcgaagaccttctttgttacctg
gtggatgacggtggtttcctgatcatgtccaatcagaaggatcactggaacaagattggc
atgttcttcagtgaggtggacccctacctgatgcatgctctctacaacaactccttttac
aaccggaagcagtcctttgactaccagtctgtgtgtgaccccgtgccaagcagcaacacc
ggggctgcaccaagagtagtctttgtgcccaccattgcagactttgtgaacctggcctgg
tggtcatcagcagctgcctggtccctatttcagcagctgctctatggaatggtctaccac
agttggtttgtcacagatgaggtggaggcagagggaatggactccagagagaccagctgt
gtgacgatacagactcagttctacttcactaacatcaacagctcctatgacatcctgcaa
gactgtggcaactgctccaggctgatccatgccaagaggttaaacaacaccaacctgctg
tttgtggtggcagagaagatgccctgcaacacctgtgaggtggagaaactgtcccaggcg
gagacagagttcaaagaggataacccatcatgtgaggacatgagtgcagcgaggtatcga
aaagggcccgctgtgtgctacgactacaatctttctgagaacacatcagactgtgggcgg
ggccactccttccgcccctcactccagaccctgctcatgattcagctcttcctcctctat
ccaatcgccagcccccattttctgccccttttactttaa
DBGET
integrated database retrieval system
