Salmo trutta (river trout): 115207542
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Entry
115207542 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-B-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115207542
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115207542
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
115207542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
Prok-RING_4
Sina_ZnF
PDZ_Tricorn
zf-TRAF
zf-rbx1
U-box
RING_XB3-XBAT31
zf-RING_6
LemA
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
115207542
NCBI-ProteinID:
XP_029630566
Ensembl:
ENSSTUG00000014367
UniProt:
A0A673YG29
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All DBs
Position
14:18261976..18411893
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AA seq
1051 aa
AA seq
DB search
MGIELDRFKGAVDPDFKCNLCNKVLEDPLTTPCGHVFCANCVLPWVVQKSSCPVKCQRIS
TSELNHVLPLKNLILKLDIKCDNHARGCEKVVKLHHLAEHAEMCDYSPAKCRNKGCKEGL
NLKDMDAHMRESCDYRPVGICDSGCGLMLIHKEQKLNTHCCLKAMKAHNSALHGKVVNLD
KEFKKQSLKSSKREKSLLAQLSAVHNELQMTALKYQKKFTEYSARIDSLTRTLVPPCKGW
ETKNVTAILHREGGSLGFNIVGGRPCADDHDGTSNEGIFVSKIVEKGPTDKEGGLQIHDR
IMEVNGKDLSKSTHDQAVEVFRTAKEPIMVQVLRRAPRPKPSIPASDTQVVDISTQTDIT
FQHIMALTKLPATAPTVEQYLMPEEHSPGHEYFDPNDFLEGMQQEMDREELEYEEVDLYR
TNIQDKLGLTVCYRTDDEDETGIYVSEIDPNSIAAKDGRIREGDRIIQINGIEIQNREDA
VALLTSEENQNVCLLVARPEIQLDEGWMDDDRNDFLDDLHMDMLEQQHHQAMQFTASMLQ
QKKHEEDGGTTDTATLLSNHHEKDSGVGRTDESTRNDESSEQENLGDDQTTASNTLASCS
RRKLTYSQDTLGSTDLPFSNESFISADYDHADFLGIPADECERFRELLELKCQVRSVGGP
HGLYCQSAGAGRAEEGVDKELELLNEELHSIELECLNIVRAHKMQQLREQYHESWMLHNS
GFRNYNTSIDARRHELSDINELPEKSDKDSSSAYNTGESCRSTPLTLELSPDNSLRRGEE
NQGEAGAYTSAGLNNRILKPLLSPVQEADGPSRIRPSSSKESECGLQAEEKERKLGESTH
KLAQPRSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSLVSRGDPVTPRDMLE
PKKEWKVKIRSDGTRYITKRPIRDKLLKERALRIREERSGMTTDDDAISELKIGRYWSKE
ERKQHAVRAKEQKQRREFMKQSRADCLKEQASLDDDKKEPNIIELSHKKMMKKRNKKIFD
NWMTIQELLTHGAKSPDGTRVYNSLLSVTTV
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgggaattgagttggatcggtttaaaggggctgtagacccagattttaaatgcaatttg
tgtaataaagttctagaagacccgctcactactccgtgtggtcacgtcttctgcgcaaac
tgtgtgctgccttgggttgtccagaaaagcagctgccccgtcaaatgtcaaaggatctcc
acgtcagagctgaaccacgttctccctctgaaaaacctgattctgaagctggacataaag
tgtgacaaccatgccagaggctgtgaaaaagtggtaaagctgcatcatctagcagagcat
gccgagatgtgcgattactcaccggccaaatgcaggaataaaggatgcaaggagggactc
aatctgaaggacatggatgcccatatgcgcgaatcgtgtgattacagaccggtcgggata
tgcgacagtggatgtggcttgatgctcatccacaaagagcaaaaactaaacacccattgc
tgtttgaaagccatgaaagcacacaatagtgcattgcacgggaaggtggttaacttggac
aaagagttcaagaagcaatcattgaaatcaagcaaaagagagaaatcacttcttgctcaa
ctctccgctgtgcacaatgagctacaaatgacagcgctgaagtatcagaagaaattcact
gaatacagtgcaaggatcgattcgctgactaggacccttgttcccccgtgcaagggctgg
gagaccaaaaacgtcacagctatccttcatcgggagggaggttctctgggcttcaacatc
gtgggaggacgaccatgtgcggacgaccatgatggcacttcgaatgaaggaatttttgta
tccaagatcgttgagaagggaccaacagacaaggagggaggccttcagatccacgacaga
ataatggaggtgaatgggaaggacctgtccaagtccacccatgaccaggcagtggaggtc
ttccgcacggccaaggagcccattatggtccaggtgcttcgccgggcaccccgccccaaa
ccctccatccctgcctcagacacccaggtggtagacatcagcacccagacagacatcacc
tttcaacacatcatggccctcaccaagctacctgccaccgcccccaccgtggagcaatac
ctaatgcctgaggagcattcccctgggcacgagtactttgaccccaatgatttccttgag
ggcatgcagcaggagatggatcgagaggagctggaatatgaggaagtggatttgtacaga
accaacatccaggacaagcttggtttgactgtctgctacaggactgatgatgaggacgag
actgggatctacgtcagtgagattgacccaaacagcatcgctgcaaaggatggcaggatc
agagagggagatagaattatccagatcaatggaattgagatccagaaccgagaggatgct
gtggctttgttgaccagtgaggagaatcagaatgtgtgcctactggtagccagaccagag
atccagctggatgagggttggatggatgacgataggaatgacttcctggatgacctccac
atggacatgctggagcagcagcaccaccaggccatgcagttcaccgccagcatgctgcag
cagaagaagcatgaggaggatggtggaacaacggacacagccaccctgttgtccaaccac
cacgagaaggacagtggggttggccgcaccgacgagagcacgcgcaacgacgagagctct
gagcaggagaacctgggggatgaccagactacagcctccaacacactggccagctgcagc
cgcaggaagctgacctacagccaggacaccctgggcagcactgacctgcctttcagcaat
gagtccttcatctctgcagactacgaccatgctgacttcctgggtatccccgccgatgag
tgtgagcgcttccgagagctcctggagctgaagtgccaagtgaggagcgtggggggcccc
catggcctgtactgccagagtgccggggccggaagggccgaagagggggtggacaaggag
ctggagctgctgaacgaggagctgcacagcattgagcttgagtgcctcaacatcgtccgg
gcccacaagatgcagcagctaagggagcagtaccacgagtcgtggatgctgcacaacagc
ggcttccgcaactacaacaccagcatcgatgcgcgccgccacgagctctccgacattaac
gagctgcccgagaagtcggacaaggacagctccagcgcctacaacactggagagagctgc
cgcagcacccccctcaccctggagctgtccccagacaactccctccgaaggggggaagag
aaccagggcgaggccggggcctacaccagcgcagggctcaacaacaggatcctcaagccc
ctgctgtctcctgtccaagaggccgatggccccagcagaatcaggccctcctcctctaag
gagtctgagtgtggtctgcaggcggaggagaaggagcgtaagctgggagagtctactcac
aagctggcccagccccgctccccgtacaaacacgcccacatcccggcccatgcccagcac
taccagagctacatgcagctgatccagcagaagtctgccgtggagtatgcccagagccaa
atgagcctggtcagtctggtcagccgcggtgaccctgtgacccccagagacatgctagag
cccaagaaggagtggaaggtgaagatccgcagcgatggcacacgttacatcaccaagagg
cccatcagggacaagctgctgaaggagcgcgccctgcgtatccgcgaggagcgcagcggc
atgaccacagacgacgacgccatcagcgagctgaagattgggcggtactggagcaaggag
gagaggaagcagcacgcggtgcgcgccaaggagcagaagcagcgccgcgagttcatgaag
cagagccgcgctgactgcctgaaggaacaggccagcctagatgacgacaagaaggagccc
aatatcattgagctgagccacaaaaagatgatgaaaaagcggaacaagaaaatctttgac
aattggatgactatccaggaacttttgacccacggtgctaagtcgcctgacggcacgcga
gtgtacaactccctcctgtctgtcaccacagtatag
DBGET
integrated database retrieval system
