Salmo trutta (river trout): 115207585
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Entry
115207585 CDS
T08542
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03083
Polycomb repressive complex
stru04980
Cobalamin transport and metabolism
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115207585
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
115207585
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115207585
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115207585
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115207585
03029 Mitochondrial biogenesis [BR:
stru03029
]
115207585
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115207585
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
115207585
HMT complexes
COMPASS/SET1 complex
115207585
MLL-HCF complex
115207585
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
115207585
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
115207585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
115207585
NCBI-ProteinID:
XP_029630659
Ensembl:
ENSSTUG00000017458
LinkDB
All DBs
Position
14:20359772..20377645
Genome browser
AA seq
1701 aa
AA seq
DB search
MTFPGSMVSGTTGSTLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKAKSPKNGPPPCARLGHSFSLVGNKCFLFGGLANDSEDPKNNIPRYLNDLYTLELR
AGSSVVGWDIPITYGVLPPPRESHTAVVYTEKESKKSHLIIYGGMSGCRLGDLWTLDIDT
LTWTKPSVNGTAPLPRSLHSAITITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDSMAWESVLMDTLEDNIPRARAGHCSVSINSRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPHAPSRVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPAAAAATSPALTATSSL
PGNLPKSPAAPSAQNLPHTAILKVAAPQSGMGTSLVTVRANQAVKSPVTVTSLPPGVRMM
VPAQTAHGTPIGNSPQMSGMAALAAAAAATQKIPPSSGTVLNIPAGATLVKTMAVSPGST
TVKMSSPLMVSNPATRMLKTAAAQVGTATVSSPNRPIITVHKSGTVTVAQQHQVVTTMVG
GVTKTITLVKSPLTMGGSGTLQMSSLGKMISVVQTKPVQTSAVTGQPSTNPLSQLIQTKG
SLPAGTILKLVTSADGKPTTIITTSQAGGTGNKPTILNISGMSPTTTKQGTTIIKTIPMS
AIMNQPGATVTSSTGKMPYTILTTKMMTTGTPGKIITTMPKLGTATGQHGLTQVVLKGAP
GQPGTILRTVPMGGVRLVTPVTMTSVKPNVTTLVVKGTTGVATLGTVTGTVSSSLAGGSV
ASANASLAPPITTLGTIATLPSQVINPTAITVSVAQASLTTVTTLSTSTMSVNQPTQVTL
ITTPSGVEAQPVQDLPVSFLASPTSEQPSTEAGDATGTVTMVCSNPPCETHETGTTNTAT
TASANMSVCSNPPCETHETGTTNTATTSSTNMGGAMRVCTSPPSETHEMGTTNTSTTAHS
IMGTNKMDTVQSSSSSHPPSLYSSTPQTITSAYPGTATGNQEPENLRTGTTFTPTTARSD
MGSAQTGTVQSPKQPAPAVGLIVCSNPPCETHETGTTNTATQSSSGMGNGQTSTVQKVCS
NPPCETHETGTTNTPSQASSNMAGNQTGTVTVQGVCSDPPCETHETGTTNTATTATADGA
DGGTSSTETPSTTASGTTPATIQSRAITTVTQSTPAPGPSVPSISSITEGAAVSTEEPMQ
IDAATEGGDTAMETGLLPELMSEGQIGTGLSAEELAVTVAAEAAAQAAAQAAATEEAQAR
AIQAVLQAAQQAAMNEGDSGSDGQQTTTIPIVLTQQELAALVQQQQQLQEAQALAQAQQQ
GNAQALPTEGLAPADSLNDPTSESNGHNEMAAAVSSAVASLLPRTSTETLAPSSTFAVSS
PANLQPAASLAEVTNGIEGGKLNPQPAPIKTLVKKENQWFDVGIVKVTNMVVTHFFIPGD
DSQVEDDSGAIPDYNQMKKMELQPGTAYKFRVAGINACGRGSFSEISAFKTCLPGFPGAP
CAIKISKSPEGAHLTWEPPSVTSGKIIEYSVYLAIQSTQTAEPKTSTPAQLAFMRVYCGP
NPSCLVQSTSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESSKDGASTKPAPK
RPAVSSPDVKAAGQKKARTEQ
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atgacatttcctggttcaatggtgtctgggaccactggctcaactctgcagccacgatgg
aagcgggttctaggatggtctgggcctgtgcctcgaccaagacatggtcacagagccgtt
gctataaaggaattgatggtggtttttggaggaggaaatgaaggaattgtggatgaattg
catgtctacaacacagcaacaaaccaatggtttatccctgcggttcgtggtgatattccc
cctggatgtgctgcatacggttttgtttgtgatggcacccggcttctggtgtttggtgga
atggtggaatatggaaaatacagcaacgatctctatgagctacaggccagcagatgggaa
tggaaaaagttaaaagcgaagtctcccaaaaatggcccacctccctgtgctcgacttggc
cacagtttctctctggtgggcaacaagtgcttcctgtttggagggctggctaatgacagc
gaggaccccaaaaacaacatccctagatacctgaatgatctgtacaccctggagcttcgt
gctggctccagcgttgtaggctgggatataccaattacttatggcgttttgccacctcct
cgcgagagccacactgctgtagtgtacacagaaaaggagagcaagaaatctcacctgatc
atctatggagggatgagtggctgtcgtctgggagatctatggactcttgacattgacacc
ctgacctggactaagccatcggtgaatggcacagcacctctgcccaggagtctccactct
gccatcaccatcacaaacaagatgtttgtttttgggggatgggttcccctggttatggat
gacgtgaaggtggcaacacatgagaaggaatggaagtgcacaaacactctggcctgccta
aatctcgactccatggcctgggaatcagtgttgatggataccttggaggacaatatccca
agggcccgggcaggacattgttctgtgtccatcaactctaggttgtatgtctggagtggc
cgtgatggttaccgtaaagcatggaacaaccaagtctgctgtaaagacctctggtacctt
gagacagagaggccacacgctccctcgagagtgcagcttgtccgtgccaacaccaactcc
ctggaggtgagctggggcgctgtgtccaccgcagacacctacctgctgcagctgcagaag
tacgacatcccagctgccgctgctgccacctccccggcccttaccgccacctcttctcta
ccagggaacttgcccaaaagcccagctgctccctctgctcagaacctaccacacacagcc
atcttgaaggttgcagcccctcagtctggcatgggtacctcccttgtcactgtgcgagcc
aaccaggctgtgaaatcccctgtcactgtgacatcacttcctccaggggttcggatgatg
gttcctgcccagactgcccatggaacgccaatcggcaatagccctcagatgagtggcatg
gcagctttggctgcagctgcagcagccacacaaaagatcccgccctcttcaggcactgtg
ctcaacattccagcaggtgccacccttgtcaaaaccatggctgtctcccctggctccacc
acagtcaaaatgtcatctcctctcatggtcagtaacccagccactcgcatgctgaagact
gctgcagctcaggtgggcacagcaactgtatcatcgcccaaccgacccatcatcactgtg
cacaagtcaggcacggtcaccgtagcccagcaacaccaggtggttaccaccatggtggga
ggagtcaccaagacaatcaccctggtcaagagcccccttactatgggaggcagcggcact
ctgcagatgtccagccttggcaagatgatatctgtggtacaaaccaagccagtgcagaca
tcagctgttacaggccagccttccactaaccctctatcacagctcatacagactaagggt
tctctccctgccggcaccatactgaagctggtgacctcagcggacggcaagcccaccacc
atcatcaccacgtcccaggcagggggcacagggaacaaacccaccatcctgaacatcagc
ggcatgtcgcccaccacaaccaaacagggcaccaccatcatcaagaccatccctatgtct
gctattatgaaccaacctggagccacagtgaccagcagcacagggaagatgccctatacc
attctcaccaccaagatgatgaccactggcactccaggcaaaatcatcactaccatgcct
aagcttggcactgcaactggccagcatgggctgacacaggtggttttgaagggtgctcca
ggccaacctggcaccattctgcgcactgtacccatgggtggagtccgactcgtcaccccg
gttacgatgacttctgtcaagcccaatgtaactacactggtcgtcaagggaacaactggt
gtcgccaccctggggacagtcacaggcacagtctcctccagcctggcagggggcagtgta
gccagtgccaatgcctctctggcacctcccatcaccaccctgggcaccatcgccaccctg
cccagccaagtcatcaaccccactgccatcactgtgtcagtggcccaggccagtctgacc
acagtcactaccctgtctacctccaccatgtcggtgaaccagccaacccaggtgactctc
atcaccacccccagcggtgttgaagcccagccagtgcaggacctgcccgtgtccttcctg
gcctcccccacttctgagcagccctccactgaggccggggatgccactggtactgtcacc
atggtctgctccaacccaccctgtgagacccacgagacaggaaccaccaacacggccacc
actgcgtctgctaacatgtcagtgtgctccaaccctccctgtgagacccacgagactgga
accaccaacaccgcaacaacctcttccaccaacatgggaggggcaatgagggtgtgtaca
agccctccgtcagagacccatgagatgggcaccactaacacctcgaccaccgcccactcc
atcatgggaactaacaaaatggatactgtccagagtagctcatcatctcaccccccatct
ctgtactcctctacccctcagacaatcacctctgcttaccccggaaccgccacaggcaac
caggaaccagagaacctgcgcaccggcaccaccttcacccccaccacagcacgctctgac
atgggctcagcccagaccggcactgtgcagagtcccaagcagccagcaccagccgtgggc
cttatagtttgctctaacccaccctgcgagacacatgaaacgggcacaaccaacactgcc
actcagtcctcgtccggcatgggtaacgggcagactagcactgtgcagaaagtgtgctca
aacccaccctgtgagacccacgaaacggggaccaccaacaccccatcccaggccagttcc
aacatggctgggaaccagacaggaacagtgacggtgcagggggtgtgttcagaccccccc
tgtgaaacccacgagactggcaccaccaacacggcaactactgccacagcagatggagca
gacggtggcaccagcagtactgagactccctccactactgcatcaggaacaaccccagcc
accatccagagcagagctatcactactgtgacccagtccacaccagccccagggccctca
gtaccttccatttcatcgatcactgagggtgcagcagtttccacagaagagcccatgcag
attgatgcggccacagaagggggagacaccgctatggagactgggctgctcccagagctg
atgtcagagggacagataggaactggtctgtctgcagaggagctggctgtgactgtagca
gcggaggcagcagcacaggctgcagcacaggcagcagccactgaggaggcccaggcccgg
gccatccaggcagttctccaggcagcacagcaggccgccatgaacgagggtgattctggc
tcggacggacagcagaccaccacaatccccattgttctgacccagcaagagctggcggcc
ctggtccagcagcagcagcagctccaggaggctcaagccctggctcaggcccagcagcaa
ggaaacgcccaagccctgcccactgagggcctggcccctgcagacagcctgaatgacccc
acttctgagagcaatggacacaacgagatggctgcagctgtttccagcgctgtggcatca
ctgctgccgcgcacctccacggagaccctggccccctcaagcacatttgctgtttccagt
ccagccaacctgcaacctgcagcttctctagcagaggtgaccaatggcatcgagggcggg
aagctaaaccctcaaccagcccctatcaagacacttgtaaaaaaagagaaccagtggttc
gatgttggaatcgttaaggtgacaaacatggtggtcacacacttcttcatcccaggggac
gattctcaagtagaggatgactcgggcgccattccagactataaccagatgaagaaaatg
gagctgcagcctggcacagcttacaagttccgtgtcgctggcatcaatgcttgtggtcgt
ggttccttctcagagatctctgctttcaagacctgtctaccaggcttccccggagcacct
tgtgccatcaaaatcagcaagagcccggagggtgcccacctcacctgggagcctccttcg
gtgacatcagggaagatcattgagtattctgtgtacctggccatccaaagcacccagaca
gctgagcccaagacctccaccccagcccagctggccttcatgcgggtgtactgtgggccc
aacccctcctgcctggtgcagtccaccagcctctcgaatgcccacatagactacaccacc
aagcccgccatcatcttccgcattgccgcgcgcaacgagaagggctatggccctgccaca
caagtccgatggctgcaagagtccagcaaagatggcgcctccacaaaacctgccccaaaa
agaccagcagtgtcctcacctgatgttaaggctgctggtcaaaagaaagcaagaacggag
cagtga
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