Salmo trutta (river trout): 115207616
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Entry
115207616 CDS
T08542
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
stru
Salmo trutta (river trout)
Pathway
stru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115207616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115207616
03036 Chromosome and associated proteins [BR:
stru03036
]
115207616
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115207616
Coactivators
SAGA/TFTC/STAGA complex
115207616
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
115207616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
115207616
NCBI-ProteinID:
XP_029630748
Ensembl:
ENSSTUG00000024908
LinkDB
All DBs
Position
14:complement(21832595..21845037)
Genome browser
AA seq
957 aa
AA seq
DB search
MAAGSDLLDEVFFNAEVDEKVVRDLVGSLESELSGHESPEASSQTVAKHMASSGTGFNAN
VQQNKRGLAQEVAKAGAGVQGGVISNTRFQGSAMDASSSESDSSAGHGQGKTVAVSASII
TPVPNHGGKVSSSATQTLNGGSLLNCHNSGSAVSLSGTPLSSSCTSSGNASVAVTVVNNG
PGLSKGHASAVMPPSLNTTISQASFVNSQNVVTSSHAMSLGTGPAISHIVRPSMQTAGSG
TAMNGPNAGLPFDCLNNGQSPTSVAVSAGSHIIMAEAPKTIIQTAPGAVTNPSFQSAPRV
STPVTVAASPGGSRSIAQQVLAPRHPQTSPNQPNVQNIQLPPGMVLVRSESGQLLMIHQQ
TLAQMQSQSQGVMAPRPATPTSTPPFQITSVQAPGTPILTRQVTPTTIIKQGSPVPTSAP
VTTTLQKPPVTTTLQRPPVLQSPMIVVGAAAGTSMGTALPGATQRTVTASPGTTVRFATE
TMENVKKCKNFLSTLIKLASSGKQSSETAANVKDLVKDLLEGKIEVEDFTNRLYRELNSS
PQPYLVPFLKRSLPALRQLTPDSAAFIQHSGLQQQAPATTPTTVVLDSPALRPAAQTIRP
HLQPVISKQGQTTQMVLQPQQQGAMVRPLQVTPMVTLRGPPPHSHIMLGQPQVQLKQLQT
VPVVKPGVLTGSKSSPGAASLATAVQKNKLKEAGGTFRSAMDDDDINDVASMAGVNLSEE
SARILATNSELVGAVTRSCKDEAFLHTSTLTRRILEIGKKFGVSDLGPEVVNYVSHASQT
RLQNLLEKVSEVAQQRNINFKEDSRYEQTSDMRAQIKFFEQLDQMEKQRKEEQEREILMK
AAKSRSRQEDPEQLRLKQKAKEMQQQELFQLRQKEANLTALAAIGPRKKRKMEAAAAAAG
AEGSGSSPSASGSGSSGASRQFIRQRITRVNLRDLLFCLENERDTSHSHLLYKGFLK
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaggctccgatttgctagatgaggttttctttaacgctgaggtggacgagaaa
gtagttcgtgatcttgtggggtctcttgaatccgagctttcgggtcacgagagccctgag
gcaagtagccagacagtcgctaaacacatggccagttccgggacagggtttaatgctaat
gtccagcagaacaaacggggacttgctcaagaggttgctaaagcaggggctggagtgcaa
gggggtgtcattagtaatacgaggttccagggttcagctatggatgcctcatcgagtgag
tcggactcatcagcaggacacggccaaggaaagactgttgctgtcagtgccagtataata
actcctgtcccaaaccacggggggaaagtatcctcttccgcaactcaaactttgaatgga
ggcagtttattgaactgtcacaattcaggaagcgctgtctctctcagtgggacaccgctg
tcaagtagttgcacgagtagcggcaatgcctcggtagctgtcacagttgtcaacaacggg
ccggggttgtcaaaaggacatgcgagtgcagtaatgccaccttcattgaacaccactatc
agccaggcatcattcgtgaactctcagaatgttgtcacctcgtctcacgctatgagtctg
ggcactggacctgccatatcacatattgtgaggccatctatgcaaactgcgggatcgggt
acagcgatgaatggtcctaatgcgggattgcctttcgattgcctgaacaatggtcagtcg
cccacttctgtggctgtcagtgcggggtcgcacatcatcatggcagaggcgcccaaaaca
atcatacagactgctcctggtgctgtaacgaacccgtcgttccagagcgcaccgagggtt
tccactccggtgacagtagctgcgagcccgggagggagccgttctatcgcgcaacaagtg
ttggcgcctcggcacccccagacatctccgaaccagcccaacgttcagaacatccaactt
cccccaggtatggtcctggtgcgcagtgagagtgggcagctgttgatgatccaccagcag
accctggctcagatgcagtcccaatcccagggagtcatggccccccgcccagccaccccc
accagcactcctcctttccagatcacctcagtccaggctcctggaacgcccatcctcact
aggcaggtgactcccaccactatcatcaagcagggctcgcctgtgccaacctctgcacct
gtcaccaccaccctccagaagcctcctgtcaccaccacactccagaggcctcctgtccta
cagagtcccatgattgtggtaggtgctgctgcaggcacttctatggggacagcgctacca
ggggccacccagaggaccgtcaccgcatcacccgggaccactgtacgctttgcaacggag
acgatggagaatgtgaagaaatgcaagaacttcctgtctacattaatcaagctggcgtcc
agcgggaagcagtcctcagagactgccgccaacgttaaagacctggtcaaagatctcctg
gaagggaagattgaagtcgaggacttcaccaacaggttatacagagagctcaactcctca
cctcagccttacctcgtgcctttcctcaagaggagccttcctgccctgcggcagctcacc
ccagactcggcagccttcatccagcacagtgggctccagcagcaggcccctgccaccacc
cccaccacggtggtactggacagcccagccctgcgccctgcagcccaaaccatcagacca
cacctccagcctgtcatcagcaaacaggggcagactacccaaatggtgctccagcctcag
cagcagggggcaatggtaaggcctcttcaggtgacccccatggtgaccctcagaggtccg
cccccccacagtcacatcatgctgggacagccacaggttcagctcaaacagctacagaca
gtccctgtggtgaagcctggagtgttgactggatctaagtcgtctcctggtgctgcctct
ctggccactgcagttcagaagaacaagctgaaggaagctgggggcacgttcaggtcagct
atggatgatgatgacatcaatgatgtggcatctatggctggggttaacctgtctgaggag
agtgcccgtatcctggcaaccaactccgagctggtgggagcggtgacacggtcctgtaag
gacgaggccttcctccatacctccacactgaccagaagaatactggaaataggtaagaag
tttggtgtgagtgatctggggccggaggtagtgaactacgtgtcccacgcctcccagacc
aggctgcagaacctgttggagaaagtctctgaggtggcccagcagaggaacatcaacttc
aaggaggacagtcggtacgagcagacgagcgacatgcgtgcccagatcaagttctttgag
cagctggatcagatggagaaacagaggaaagaggagcaggagagagagattctgatgaag
gcagcaaagtctcgttctcgtcaagaagaccctgagcagctgcggttgaaacagaaggcc
aaagagatgcagcagcaggagctgtttcagttgagacagaaggaagctaacctgacggcg
ctggcagccatcggccccaggaagaagaggaaaatggaggctgcagccgctgcagctgga
gctgagggctcagggtccagtccctctgcgtctggtagtggtagttcaggagcgtccaga
cagtttatccgccagcgcatcacgcgtgtcaacctcagggacctgctcttctgtttggag
aatgagagagacaccagtcactcccatctcctctacaaaggcttcctcaaatag
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