Salmo trutta (river trout): 115207816
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Entry
115207816 CDS
T08542
Name
(RefSeq) integrin beta-7-like isoform X1
KO
K06590
integrin beta 7
Organism
stru
Salmo trutta (river trout)
Pathway
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04514
Cell adhesion molecules
stru04672
Intestinal immune network for IgA production
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115207816
04514 Cell adhesion molecules
115207816
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115207816
09142 Cell motility
04820 Cytoskeleton in muscle cells
115207816
04810 Regulation of actin cytoskeleton
115207816
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
115207816
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115207816
04515 Cell adhesion molecules [BR:
stru04515
]
115207816
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115207816
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin beta subunits
115207816
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Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_2
I-EGF_1
EGF_integrin
EGF_TEN
vWA_SIBA-E
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
115207816
NCBI-ProteinID:
XP_029631169
LinkDB
All DBs
Position
14:complement(31520501..31535435)
Genome browser
AA seq
763 aa
AA seq
DB search
MVGIFILGTFLLYCVGQNQIQGVPQGCVSQPSCSACLRSPGCAWCIHKDFLKSGESSERR
CDTAESLRTRRCEQMDIINPRSDPVFLKNNDLSSNSDNVVQLKPQNLLFKLRVGVPQTFN
VSFKRAEGYPIDLYYLMDLSFSMKDDLDTIKNLGQDILYALKKVTQKVRIGFGSFVDKVA
LPYVSQVKAKKNNPCPNRMNTCQPAFSFQNILRLTEDADKFKTRVSDQIISGNLDSPEAG
FDAIMQAAVCQSVIGWNNVTRILVYTSDDTFHIAGDGRLAGIFEPHDGMCHLNDTGFYDS
TKYDYPSVGQLARVLSANNIQLIFAVTEDSVAAYKALSKLIPQSVVGVLKNDSSNVVLLI
SEAYNNLSSTILLEHHEAPSGLDLTYRSHCTPEKGDNTPWQRRGECMNVKLNQQVNFTVS
LNISTCLKEKQTFSLKLQGISETLKVSVETLCDCDCQDREEQSSHCNENGTLTCGICSCD
EGHLGQRCECELPKDMTSADSMAATCRQDNSSQLCSGHGSCECGKCICWGTHNGNFCQCD
DNSCARHNNRLCGGNGQCDCGTCNCTANYTGSACDCSTLTDQCRTVGKLCNGQGTCQCNK
CQCTKDFFGINCSKIADACPKFLECVTCELDNKKSSGLMSNCSQLCGSVKLTWMKGPQEF
PCSKDTISYKVELLPDGNILIFYADLPRSIDRTYVIIGSSVSSIIFIGIAVILISRLMLE
IHYRREYDSFLKAKEAEVWQDTKNPLFQDATTVVMNPMHIQED
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggttgggatctttatattagggacctttctcttgtactgtgtgggacagaaccaaatt
caaggggtcccccaaggatgtgtgtcccagccctcatgttcagcttgcctgaggagccct
ggatgtgcctggtgcatacacaaggacttcctgaagtctggagagtccagtgagcggagg
tgtgacactgctgagtctctgaggaccaggcgttgtgagcagatggacatcatcaacccc
cgatcagatccagtctttctgaagaacaatgatctcagcagcaactcagacaatgtggtc
caacttaagccacaaaacctcctcttcaaactcagagttggagtccctcagaccttcaat
gtgtcattcaagagagccgagggctaccccatagacctgtactacctgatggacctgtcc
ttctccatgaaggacgacctggacaccatcaagaacctaggccaggacatcctctatgcg
ctgaaaaaagtcacccagaaggttcgcataggcttcggctcatttgtagacaaggtggct
ctgccatacgtcagccaggtgaaggccaagaagaataacccctgtcccaaccgcatgaac
acctgtcaacctgccttcagcttccagaatattctgagactcacagaagacgcggacaag
ttcaagaccagggtcagcgaccagatcatctctggaaacctggactcccccgaggcaggc
tttgatgcaatcatgcaggcagctgtctgccagagtgtgattggttggaacaatgtcacc
cggatcctggtctacacatcagatgacaccttccacattgccggggatggcaggctggct
ggtatattcgagcctcatgacggcatgtgccatctcaatgacactggcttctacgatagc
actaaatatgactacccttcggttggccagcttgccagggtcctgtcagccaataacatc
cagctcatctttgctgtcaccgaggacagtgttgctgcctacaaggcattgagtaaacta
atccctcagtcagtggtgggagtcctgaagaatgactccagcaacgtggtcctgctcatc
tcagaggcctacaataacctgtcctccaccatcttactggagcaccatgaagctccctca
ggtctggacttgacctacagatcccactgcacccctgaaaaaggggacaacaccccatgg
cagaggaggggcgagtgcatgaatgtcaagctcaaccagcaggtcaacttcacggtaagc
ctgaacatttcaacatgtctgaaggagaagcagacgttttccctaaaactgcagggcatc
agcgagaccctgaaggtttctgtggaaaccttgtgtgactgtgactgccaagacagagaa
gagcagtcctcacactgcaatgaaaatggaacgctcacctgcggcatctgcagctgtgat
gagggtcacctgggtcagaggtgtgagtgtgagctgcctaaggacatgacctctgccgac
tctatggccgcaacatgtcgccaagacaactcctcgcagctgtgcagcgggcatgggagc
tgtgagtgtggaaagtgtatctgttggggcacccacaacggcaatttttgccaatgtgat
gacaacagctgtgcccgccacaacaacaggctctgcggtggtaatgggcagtgtgactgt
ggaacctgtaattgtactgccaactacacaggctctgcatgtgactgttccacactcacc
gaccagtgcaggactgttgggaagctgtgcaatggccagggaacatgccagtgtaacaag
tgccagtgcaccaaagacttctttggcataaactgctcaaagattgctgacgcatgccca
aaattcctggaatgtgtgacatgtgaattggacaataagaagagtagcggcctaatgagt
aactgcagccaactctgtggctcagtcaagctcacctggatgaagggaccccaggagttc
ccctgcagtaaagacaccatctcctacaaagtagagctgttgcctgatggcaacatcctg
atcttctacgcagatctgcctcgctctattgacaggacttacgtgatcatcggcagctct
gtgtccagcatcatcttcatcggcatcgcagtgatcctcatcagcaggcttatgctagag
atccactaccggagagagtatgacagcttcctcaaagcaaaggaggccgaagtgtggcaa
gatacaaaaaatcccttgttccaggatgccacgaccgtggttatgaaccccatgcacatt
caagaggactga
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