Salmo trutta (river trout): 115207820
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Entry
115207820 CDS
T08542
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
stru
Salmo trutta (river trout)
Pathway
stru03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115207820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115207820
03036 Chromosome and associated proteins [BR:
stru03036
]
115207820
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115207820
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115207820
PBAF complex
115207820
GBAF(ncBAF) complex
115207820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
HEAT_GCN1
TrAA12
Motif
Other DBs
NCBI-GeneID:
115207820
NCBI-ProteinID:
XP_029631173
Ensembl:
ENSSTUG00000015367
LinkDB
All DBs
Position
14:31669260..31683150
Genome browser
AA seq
1057 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTRLPMKSFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPVIYMSSDIEAKLLGKLKDIIKRHQGSVTEDKTSSSHVVVP
IPASLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWISASEVEAAVEEAPSPEKPRKVHAK
WILDLDQFNEWMNEEDYEVGEGGPKRKRISAKTLTDEVTTPGDERRDKKPGSAKKRKRSP
SPSPTPPPQESKKKNTKKGPTTPYTKSKRGQREEEPEDLTKDLDEPSPVPAVEEVTLPKT
ANTKKDSESTPVKGGTMTDLDEQEDESMETAGKEEEEGSPSVKGEPVKGSDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSS
LVPLQPKASQTPAAQQILSFPDKVKEKQPADLQNFGLRTDMYSKKTGPPKSKTAASAMRD
WTEQETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDTSSSLGPLA
YQPVPFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVE
EAARTSGRQDPLYGLEGSGIAGTSLEEGEKPEESSEESKSDSQSSEEKRETKENKEGAME
EGEKQGENGKKEEERGREGEGEGEAEKTDSEMGDGEKEKEGKEGSEEGQREGESEGERKA
KVERDVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFE
ELETIMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQQHSQTGGPHSAP
APTGPPPQGPSATQSQPTLSTPAPQPAPSPAPPTSSIPSSVQPAEPQPPPSGPHTSPPRP
PGQPPTAHSSTTPTLHEPSAPLPEDTHHSSAPVPPPQ
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaacgtaaaatatttcgaagcgtctgataca
gtctcgcagttcgacaatgttcgcgtttggttgggcaagaattataaaaagtacatccag
gcggagccccccaccaacaagtctctgtccagcctggtggtccagctgctgcagtttcag
gaggaggtgttcggacgacatgtcagcaacccacctctcaccaggttgccgatgaagagt
ttcctggactttaagtctggcggggctctctgccacattctggctgcagcctacaagttc
aagagtgatcagggctggcgcaggtttgactttcagaatccttctcggatggaccgcaat
gtagagatgttcatgactatcgagaaatctctagtacagaacaactgtctgagtcgacca
gtgatctacatgagctctgacattgaggccaagctgctggggaaactgaaggacatcatc
aagaggcaccagggctcagtgactgaagacaagacgtccagctcccatgtggtggtcccc
atccctgccagtctggaggaggaggagtgggtgcgtccggtgatgaagagagacaagcag
gtgctgctccactggggatactatcctgacagctatgacacctggatctcagccagtgag
gtggaggctgctgtggaagaagcgcccagcccagagaaacccaggaaggtccatgccaag
tggatcctggacctggaccagtttaatgagtggatgaatgaggaggactatgaggtgggg
gagggggggcccaagaggaagaggatctcagctaagaccctgacggatgaggtcaccacc
ccaggggacgagcgtcgtgacaagaagcccggcagtgccaagaagaggaagcgctcgccc
tccccctcgcccaccccaccaccccaggagagcaagaagaagaacacaaagaaagggccc
accaccccgtacactaagtctaagcgaggccagagagaggaggagccggaggatctgact
aaagatctggatgaaccatcacctgtacctgcagtggaggaggtcaccctacctaagaca
gccaacactaagaaagactctgagtcaacaccagtaaagggaggtaccatgacagacctg
gatgagcaagaggatgaatccatggaaactgcaggaaaggaggaggaggagggctctccg
agtgtgaagggagagccggtgaaagggtcggaccttcatgaggacaacgtgaccgagcag
acccaccacatcattatccccagctatgctgcctggttcgactacaacagtgtccatgct
atcgagcgtagagccctcccagagtttttcaacggcaagaacaaatccaaaacccctgag
atttacctggcctataggaacttcatgattgacacttacaggctgaacccgcaggagtac
ctcacctctaccgcctgccgcaggaacctggccggagacgtgtgcgccatcatgagggtg
catgcgttcctggagcagtggggtctgatcaactaccaggtggactccgagagccggccc
acccccatgggccccccgcccacctcccacttccacgtcctggctgacaccccttccagc
ctggtgcccctgcagcccaaggcctcccagactccggcagcccagcagattctgtccttc
ccagacaaggtgaaggagaagcagccagccgacctgcagaactttggcctgaggacagac
atgtacagcaagaagactgggcctcctaagagtaagactgctgccagcgccatgcgagac
tggaccgaacaggagacactactgctgctagagggtctagagatgtacaaggatgactgg
aacaaggtgtcggagcacgtgggctcacgtacccaggacgagtgtatcctgcacttcctg
cgtctgcccatcgaggacccatacctggaggacacgtcctcgtccctgggccccctggcc
taccagcccgtccccttcagccaggcaggcaaccccgtcatgagcaccgtggccttcctg
gcctccgtggtggacccccgcgtggcctccgcagccgccaagtctgccctggaggagttt
tcccgtatgaaggaggaggtcccagcagcactggtggaggcccatgtgaggagggtggaa
gaggcggcgcggaccagtggcagacaggaccccctctacggcctggaaggcagcggcatc
gcaggcaccagcctggaggagggagaaaaacctgaagagagcagtgaggagagtaaaagt
gacagccaatccagtgaggagaagagggagaccaaggagaacaaagagggagccatggaa
gagggggagaagcaaggagaaaacgggaagaaggaggaggagagagggagagagggagaa
ggagagggagaggctgagaagacagactcggagatgggtgatggagagaaggagaaggaa
gggaaggagggctcggaggagggccagagagaaggagagagtgagggagagaggaaggcg
aaggtcgagcgggatgtgggagaggggaacctggctaccgctgctgcctcggccctggct
gctgctgccgtcaaagccaagcacctggctgcggtggaggagaggaagatcaagtctctg
gtggctctgctggtggagactcagatgaagaagctggagatcaaacttagacactttgaa
gagctggagaccatcatggaccgagagagggaggcgttggagtaccagaggcagcagctg
ctggcagaccgtcagtcgttccacatggagcagttgaagtatgcagagatgagggcgcgt
cagcagcacttccaacagatccagcagcacagccagactggaggcccacactccgccccg
gcccccactggccccccaccccagggcccctcagccacccagtcccagccaaccctcagt
acccctgcaccacagccagctcccagcccagcaccccctaccagctccatcccttcctct
gtccagcccgctgagccccagccgccccccagtggtcctcacacctcacctccccgcccg
ccaggccagccccccacggcccactccagcaccaccccaacactccacgagcctagtgcc
cctctacctgaggatacacaccactcctcagccccagttccccctccacagtga
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integrated database retrieval system
