Salmo trutta (river trout): 115207882
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Entry
115207882 CDS
T08542
Symbol
fancd2
Name
(RefSeq) Fanconi anemia group D2 protein
KO
K10891
fanconi anemia group D2 protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
115207882 (fancd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stru03400
]
115207882 (fancd2)
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
115207882 (fancd2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
FANCI_S2
CCDC53
X92_N
Motif
Other DBs
NCBI-GeneID:
115207882
NCBI-ProteinID:
XP_029631278
LinkDB
All DBs
Position
14:33635424..33662370
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AA seq
1456 aa
AA seq
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MMRKKRRSSVDKSAAPPDVSKSKKSRTTGHQSKTTAQEDTSIDSVFGQFLHEAGVVLRQG
STSNEIAVDQVVFQKRLQQRLKKSPRYPGIVQEFITGLESHIEDPERFRNCLLPCVPRLA
DGDSSSVSSFQESLLRMLLGIEMLQVLVINTLFEKLPEFMFDGAGQDGLNIPRVIVNQLK
WLDRIIDSKELAGKLMQLVSVASVEIQRDIITSLPEILEDSQHSDIARELNSLLQENTQL
TVPILDAFSSLNLSSTLLAEVRVSVMATLSAVHLEDLPVVVKFILHSISSSDALEVVCDL
RKKLELELCVLPPVLQASQSRMKNKGTTESSNTSASSSSQDSVALVLDGIKSAVRFQKTT
SEAWLKAIENVDTAEDHKVIDLLVLFILHSTNANHSRRGVERVLKVKVRAGQIQEALLQK
TFRGYAQVMRGYFPSILALAQSLLRSPDPCVVPIGGHMYRLSFTAFDSYCQQEVVGSLVT
HVCSGVGGEVDVALELLCGLVTEKPSEMALYAVFVKGILDYMDNLTPQQIRRLFHLLSGL
AFGQQQQGTHIQDDMHIVVRKQLSSTVPKYKRIGIIGAVMVVGSMGACRPKVEDSQGGTL
PKETFRQVTALLELVRSCSESSPEAAALYYDELANLVLTCTLDPLVQAWIGKSVLEDFQE
DFVVDLGPDITGSFPFPACMMYNLDDEESQGGIAINLLQLLSDDLQHKGELWSKIGNNKT
QRRVSPLCLSPFFRLLRLCEEQQHQGDLEEIDALLGCPLILTDMDVVEKSESLSKPEREF
LCGLLFHTINWFREVVNAFCSQKDPEMKMKVVTRLQNITYLQTLLERTLAATPGYAPPLA
NFDGESTEGVPLSSSSAAPKKGKKEGTGKKRKAPAKNSSADSSQLEEGTEAEETQQDHAE
KEKVQEATRPGVSLVSYRPFFRELDMEVLSVLQCGLLSRSLLDSELHSKVREEVQLGPAE
LVFLLEDMWRKLEFSLTAAPAKRVPFFKGKTDKSVGFSHLQQKSPKDIAACCVQLLPTLC
THLENCHNHFQTLLPENQGVVDASGLDVREHQLLSSAYQLLLQVLHTTFSWSGFSQPEHR
GLLKKILGVLAGRLKEGGPELTMDQLIKHSFEYLLNFHSTVPSLSIALCLSQLLSTVANR
GGHQATYREQTATLARRFLCQEWRTTSGDREKGPKHNETLQTLLSIYLEHTDDVLKAVEE
IAGEGIPELLNSAKGASSRTWPTLNRLTFLVFYKGMMGVLEKAVRKIPPGRNSDSTEVTS
EKLLTWNLAVRDFHILVNLVKVFDNRPVLNVCLKYGRLFLESFLKLGMPLLDFSFKKHKE
DVQSLLKTFQLSTRQLHHMCGHSKIRQDTILTNHVPALKKSLEQFVYRVKAMLTLNHCQE
AFWLGNLKNRDLKGEEILTQRSQGSDEEEEEEEAGSPLPQEQSEDEAHESDSDGKKKKGI
RKAEGDDDEVTDDSDD
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgaaagaagagacgctcctctgtggacaaaagcgctgcaccaccagatgtgtct
aagtccaagaagagtaggaccactggccatcagtccaagaccacagctcaggaggacacc
agtattgactcagtctttggccaatttctgcacgaggctggtgttgtcttgagacagggc
agtacatccaatgagatcgctgtggaccaagtggttttccaaaagagactccagcaacgt
ctgaaaaagagtcccagataccccggtattgtgcaggagttcatcacaggactggagtct
cacattgaggatcctgagaggttcaggaactgcctcctcccctgtgtaccacgcctggcc
gacggggactcaagctctgtcagctcatttcaggagagtctgctgcgcatgctgctgggg
attgagatgctgcaggttttggtaatcaacactttgtttgagaagcttcccgagttcatg
tttgatggtgccggacaggatggtctcaatatccctcgtgttattgtcaaccagctcaag
tggttggacagaatcatagacagcaaggagttagcaggtaagctgatgcagctggtttcc
gtggcgtcggttgagatacagcgtgacatcatcaccagtctgccagagatcctggaggac
tcccaacacagtgacattgccagggagctaaactccttactccaggaaaacacccagctg
actgtgccaatcctggatgccttctcaagcttgaatctgagctccactctgttggctgag
gtgcgtgtgtctgtcatggccaccctgtctgctgtccacctggaggacctgcctgtggtg
gtgaagttcatcctacactccatctcttcctcagacgccctagaggtggtgtgtgacctg
cgtaagaagctggagttggagctgtgtgttctccctccggtgctgcaggcttctcagagc
cgcatgaagaacaaggggacaaccgagtcctccaacacctcagcatccagcagcagccag
gacagtgttgccttggtgttggatggcattaagtctgcagtgcgcttccagaagaccacc
tctgaggcctggcttaaggccatagagaatgtagacacagcagaggatcacaaggtcatt
gacctgctggtgctgttcatcctgcactccaccaatgccaaccacagccggcgtggggtt
gagagggtgctgaaggtcaaagtgagagcaggacagatccaggaggctctgctacagaaa
accttcaggggctatgcacaggtgatgcgaggttactttccttccatcttggccctggct
cagagtctgctgcgttcccctgacccttgtgtggtgcccatcggtggacacatgtacaga
ctctcattcactgcctttgactcctactgccagcaggaggtggtgggctccctggtgacc
cacgtttgcagtggagtgggtggcgaggtggacgtggctctggagctgctgtgtggcctg
gtgacagagaaaccctctgagatggccctctacgccgtctttgtcaagggtatcctggac
tacatggacaacctgactccccagcagatccgcaggctcttccacctgctcagtggcctg
gccttcggacagcagcagcagggcacacacatccaggatgacatgcacatagtggtccgt
aagcagctctccagcaccgtgcccaagtacaagcgcattggcataatcggtgctgtcatg
gtggtgggcagcatgggggcctgcaggcccaaagtggaggattctcaaggtggcacattg
cccaaggagacatttagacaggtgacggccctgctggagctggtacggtcgtgcagtgaa
agctctccggaagctgctgctctctactatgatgaactagccaacctggtcctcacctgc
actctggaccctctggtgcaggcctggatagggaagagtgtgctggaggacttccaggaa
gactttgtggtggatctgggaccagatataactgggtccttccccttccccgcctgtatg
atgtacaacctggatgatgaagagagtcagggaggcattgccatcaacctgctgcaacta
ctgtctgatgacctccaacacaagggggagctgtggagcaagattgggaacaacaagacc
cagaggcgagtgtctcctctgtgcctgtctccgttcttccggctgctcaggctgtgtgag
gagcagcagcaccagggagacctggaggagatagatgccctactgggctgccctctgatc
ctgactgacatggatgtggtggagaagtcagagagcctgtccaagcctgagagagagttc
ctctgtggcctgctcttccacaccatcaactggtttagagaggttgtgaatgcattctgc
agtcagaaagaccctgagatgaagatgaaggtggtgactcgtcttcagaatatcacctac
ctccagactctattggagaggactttggcagcaacccctggctatgctcctcctctagcc
aactttgatggggagagtacagagggagttccattgtctagctcctctgctgctccaaag
aagggaaagaaagagggtactggtaagaagaggaaagcccctgctaagaactcgtcagca
gacagctctcagctggaggagggcacggaggcagaggagacccagcaggaccatgcagag
aaggagaaggttcaggaggccaccaggcctggggtcagtctggtttcctaccggcccttc
ttcagagagctggacatggaggtgcttagtgtgctgcagtgtggcctgctctcccgctct
ctgctggacagtgagcttcacagcaaggtgcgtgaggaggtgcagctcggcccagcagag
ttagtcttcctgctggaggatatgtggcgcaaactggagttcagtctgactgctgcccct
gccaagagagtcccattcttcaagggaaaaacagacaagagcgtgggtttctcccacctg
cagcagaagagccctaaggacatcgccgcctgctgtgtccagctgctgcccaccctctgc
acccacctggagaactgccacaatcacttccagactcttctgcctgagaaccagggggtg
gtggacgcctcgggcctggatgtgagagagcatcaactgctgtcctcagcctatcagctc
ctcctacaggttctacacaccaccttcagctggtctggtttctcccagccagagcaccgt
ggcctgctgaagaagattctgggagtgttggctggccgcttgaaagagggagggcctgaa
ctgaccatggaccagctcatcaaacacagctttgagtacctgctgaacttccacagcacg
gttcctagcctcagcatagctctgtgtctgtcccagctgcttagcactgtggctaataga
ggagggcaccaggctacatacagggagcagactgcaaccctagcccggcggttcctgtgc
caggagtggaggactaccagcggagaccgagagaaaggacccaaacacaacgagactctc
caaactctcctcagtatttacctggagcacactgatgatgttctgaaggcggtggaggag
atagctggagagggcatccctgagctcctcaactcggccaaaggtgccagctctagaact
tggcccactctcaacaggctgacgttcctggtgttctataaggggatgatgggagtgctg
gagaaggctgtgaggaagattccccctggcagaaacagcgacagcactgaggtgacgagt
gagaagctgctgacatggaacctggctgtcagagacttccacatcctggtcaacctggtt
aaggtgtttgacaacagaccagtgctcaatgtgtgcctgaagtatggccgtcttttcctg
gagtctttcctgaagctgggaatgccattgttggatttcagttttaaaaagcacaaggag
gatgtccagagcctgctgaagaccttccagctcagcaccaggcagctccaccacatgtgt
ggacactccaagatccgccaggacaccatcttgaccaaccacgtgccagccctgaagaag
agcctggagcagtttgtgtacagagtgaaggccatgctcaccctcaaccactgtcaggag
gccttctggctgggtaacctcaagaacagagacctcaagggtgaagagatcctcactcag
cgctcacagggcagtgatgaagaggaggaggaggaggaggcaggctccccgcttcctcag
gagcagtcagaggatgaggctcatgaaagtgactccgatgggaagaagaagaaaggcatc
cgcaaggcagagggggacgatgatgaagtcacagatgactcggatgattag
DBGET
integrated database retrieval system