Salmo trutta (river trout): 115207924
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Entry
115207924 CDS
T08542
Name
(RefSeq) nuclear receptor subfamily 1 group D member 1-like
KO
K03728
nuclear receptor subfamily 1 group D member 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115207924
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
stru03310
]
115207924
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115207924
Nuclear receptors [BR:
stru03310
]
1. Thyroid hormone like
1D. Rev-Erb
115207924
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
115207924
NCBI-ProteinID:
XP_029631379
Ensembl:
ENSSTUG00000029258
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All DBs
Position
14:complement(35822070..35832760)
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AA seq
565 aa
AA seq
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MDNSPGGVILYAGSSGSASPSPGSPSSGYQTQSPRSSHSQPSSPEPVSFPEIGALKRERG
ENRGGPSPKLVFQFPEANATTAATSSGNTYAHPMVAKRPCSFTGTFTKTGGMVLLCKVCG
DIASGFHYGVHACEGCKGFFRRSIQQNIHYKMCVKNESCLIMRMNRNRCQHCRFKKCLYV
GMSRDAVRFGRIPKREKQRLLDEMQSYMNSLHESASMEIDSSPSSSEAPASPEPGESIST
AYRNIFAQEDVKPVIKMVVNNNNIRNNPAHDSGYAHPTPQTHSHSNPSQGYQSHPTQSYQ
TPPRYPRNNNVDNAQYTYQPSSNQSQCPVSNGSQSTQTFQANHNNFPAGESLNQTTCPWK
LSGGAKVLACPLNACPVAPRDRSSQQIWDAFSQCFTPAVKEVVEFAKSIPGFQSLSQHDQ
VMLLKAGTFQVLMVRFCSLFDPKEKTVTFLNGQTYPLTSLRALGMGSLLDAMFEFSEKLG
ALGLEPDEMALFMAVVLVSADCSGVADVVAVEQLQESLIKALRSLITRRCPDDSALFPKL
LLRLPDLRTLNNMHSDKLLAFSIDP
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggacaacagccctggtggtgtgatactgtatgctggatcatctggtagtgccagcccc
agccctggcagcccctccagcgggtaccagacccagtccccccggtcctcccactcccaa
ccctcatctcctgagcctgtctcgttccccgagatcggcgctctgaagagagaaagaggg
gagaacaggggtggaccctcgcccaaactagtcttccagttccccgaagccaatgccact
acagccgctacatcctctggaaatacctacgcccaccctatggtggccaagaggccctgc
agcttcactggcaccttcaccaagacaggaggcatggtgctcctgtgtaaggtctgcggg
gacatcgcatctggcttccattacggcgttcacgcctgtgaaggctgcaagggtttcttc
cgccgcagcatccagcagaacatccactacaagatgtgtgtgaagaatgagagctgcctg
atcatgcgcatgaaccgcaaccgctgccagcactgccgcttcaagaagtgtctctacgtg
ggcatgtccagagacgctgtgcgttttgggcgtatcccaaagcgtgagaagcagaggcta
ttggacgagatgcagagctacatgaacagcctccacgaatcagcatccatggagattgat
tcctccccttcttcctctgaggccccggccagcccagaacctggcgagtccatttccact
gcctaccgcaacatctttgcccaagaggatgtgaagccagtaatcaagatggttgtcaac
aacaacaacatccgcaacaatccagcacatgattctggctacgctcaccccacaccccaa
acccactcccattccaacccctctcaggggtaccagtcacatcccacacaaagctaccag
accccccctcgctacccacgcaacaacaatgttgacaacgcccagtatacataccaacca
tcatccaatcagagtcaatgcccagtgtccaatggcagccagtccactcagaccttccaa
gccaatcacaacaactttccagccggcgagtctctaaaccagacaacatgcccctggaag
ttgagtggaggcgccaaagttctggcatgtcctctgaacgcatgtcccgtggccccccgt
gaccgttccagccagcagatctgggacgccttttcacagtgcttcaccccggccgtcaag
gaggtggtggagtttgccaagagcatccccgggttccagagtctcagccagcatgaccag
gtcatgctgcttaaggccggcaccttccaggtgctgatggtcaggttctgctcactgttc
gaccctaaggagaagacggtgaccttcctgaacggccagacataccccctgacatccctg
cgggcgctgggtatgggctctctgctggacgccatgtttgagttcagtgagaagctggga
gctctgggcctggagcccgacgagatggccctcttcatggctgtggtgctagtgtctgcc
gactgttcaggtgtggctgatgtagttgcagtggagcagcttcaggagagtctgatcaaa
gccctgcgctcgcttatcacccgccgttgccccgacgacagcgccctcttccccaagctg
ctgctgcgcctgcccgacctgcgcaccctcaacaacatgcactccgacaagctgctggcc
tttagcatcgacccctaa
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