KEGG   Salmo trutta (river trout): 115207979
Entry
115207979         CDS       T08542                                 
Name
(RefSeq) negative elongation factor C/D isoform X1
  KO
K15181  negative elongation factor C/D
Organism
stru  Salmo trutta (river trout)
Pathway
stru03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    115207979
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:stru03021]
    115207979
Transcription machinery [BR:stru03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     115207979
SSDB
Motif
Pfam: TH1 DUF4817
Other DBs
NCBI-GeneID: 115207979
NCBI-ProteinID: XP_029631510
Ensembl: ENSSTUG00000038408
LinkDB
Position
14:complement(37471963..37477782)
AA seq 579 aa
MDEEYYERNIGDWDGPDGNQDDYVEGENDGKVQEDCLQKFSSRDYIMEPAVFNTLKTYFQ
AGGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQK
ADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSV
STACQQLEVFSRVLRTSLATLLDGGEDNLEKNLPEFAKMVCHGEHTYLFAQAMMSIMSQE
EQGGSAMRRIGQEVQKSAHQRGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADIT
VLFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHILAYAASVVETWK
KNKRVNINKDELKSTSKAIETVHNLCCNENKGATELVAELSTLYQCIRFPVVAMGVLKWV
DWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLIKLFETEHSQLDVMEQME
LKKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQ
LFLPILENDSIAGTIRTEGEHDPVAEFIAHCKSNFIMMN
NT seq 1740 nt   +upstreamnt  +downstreamnt
atggacgaggaatattacgaaaggaatattggcgactgggatggtccggatggcaatcag
gacgactatgttgaaggggagaacgatgggaaagttcaggaggactgcctacagaagttc
tccagcagagattacatcatggagcctgctgtcttcaacaccctcaaaacatatttccag
gctggtggctcccctgaacatgtcatccagctcctctcagagaactactctgctgtggca
cagactgtcaacctgctggcagagtggctcatccagatgggtgtagagccagctcaggtg
caggagcgggtagagaatcacttgaaaagtctcctgatcaagcactttgacccccagaag
gcagactccatttttactgtagagggagagactcctgcttggctggaacagatgatcgcc
cacaccacctggagagaccttttctacaagctggccgaggcccaccctgactgtctgatg
ctcaacttcactgttaagctcatctcagatgcgggctaccagggggagatcaccagtgtg
tcgacggcgtgccagcagctggaggtgttctccagggtcctgaggacctctctggccacg
ctgctggatggaggagaggacaacctagagaagaacctgccagaatttgctaagatggtg
tgtcacggggagcacacttacctgtttgcccaggccatgatgtccatcatgtctcaggag
gagcagggcgggtcggccatgcgcaggatcggccaggaagtacagaagtctgcacatcag
aggggccacgatgccagtcagatcactctggcattgggcacagcagcagcctaccctcga
gcctgccaggccctgggcgcaatgctgtccaaaggggcactcaaccctgccgacatcact
gtgctcttcaagatgttcagcagcatggacccgcctcccgtagagctgatccgagtacct
gcgttcctcgacctgttcatgcagtcgctgttcaagccaggctcaaagatcaaccaggac
cataaacacaaatacattcacatcctggcctatgctgccagtgtggttgaaacatggaaa
aagaacaagcgagtgaacatcaacaaggacgagctcaaatccacctccaaggccattgag
acggtccataacctgtgttgcaatgagaataaaggagccacagaactggtggctgagctc
agcaccctgtaccagtgcatccggttcccagttgttgccatgggggtactgaagtgggtt
gattggacggtctctgagccccgctatttccagctccagacagaccacacccctgtccac
ctggcacttttggacgagatcagcacctgtcaccagcttctgcacccacaggtcctccag
ctgctgatcaagctctttgagaccgaacactcccagctcgatgtcatggagcagatggag
ctgaagaagaccctgttggaccgtatggtccacctgctgagtcgaggctacgtgctgcct
gtggtcggatacatccgcaagtgcctggagaagctcaacacagacatctctctcatccgc
tactttgtaacggaggtgttggatgtgattgcccctccgtacacatcagactttgtccag
ctgttcctgcccatcctggagaacgacagcatcgctggcacaatacgcacagagggagaa
cacgatcctgttgctgaatttatagctcactgcaaatccaacttcatcatgatgaactga

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