Salmo trutta (river trout): 115208031
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Entry
115208031 CDS
T08542
Name
(RefSeq) RNA-binding protein Musashi homolog 1-like
KO
K14411
RNA-binding protein Musashi
Organism
stru
Salmo trutta (river trout)
Pathway
stru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115208031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115208031
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115208031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
115208031
NCBI-ProteinID:
XP_029631604
Ensembl:
ENSSTUG00000004687
LinkDB
All DBs
Position
14:complement(38442994..38466701)
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AA seq
348 aa
AA seq
DB search
MDTEGSQISLSSVDNSPHDPCKMFIGGLSWQTTQEGLNEYFCKFGEVKECMVMRDPVTKR
SRGFGFVTYIDQAGVDKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVN
TTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDMVEKVCEIHFHEINNKMV
ECKKAQPKEVMSPTGTARGRARVMPYGMDAFMLGIGMLGYPGFQAATYASRGYPSITPGY
TYQFPEFHLERTTLLTSSHPSELTAIPLSAYGPMAAAAAAAMRGSTQSRNAGYLGTSSPG
PMADLYAAASQDSALSSYLSAASPGPNSGFGHGLGGPLIATAFTNGYH
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggatacagaagggagccaaatcagcctgtcctccgtggacaactccccccacgacccc
tgcaaaatgttcatcgggggtctcagttggcagacaacacaagagggattgaatgaatac
ttctgtaaattcggcgaggtgaaggagtgtatggtgatgcgagatcccgttacgaagaga
tcgaggggattcgggtttgtaacatacatagaccaggctggtgtggataaagttttggca
caaaacagacatgagctggattctaaaacaattgatcccaaggtggcatttcctcgtaga
gcccaacccaagttggtgaccaggacaaagaagatctttgtgggaggcctctcagtgaac
acaaccatcgaagacgtcaagcagtactttgaccagtttggaaaggtcgatgacgccatg
ctcatgttcgacaaaaccaccaacagacacagaggtttcggctttgtgaccttcgagaat
gaagacatggtggagaaagtgtgtgagatccatttccacgaaatcaacaacaaaatggtg
gagtgcaagaaagcccagcccaaggaagtgatgtcaccgacgggtacggctcgaggtcgt
gccagggtgatgccctacggcatggacgccttcatgctggggatcggcatgctgggctac
ccaggcttccaagcagctacgtacgctagccgtggctaccctagcatcacgcctggatac
acctaccagttccctgaattccatttagagaggaccaccctcctgacatcatcccaccca
tctgagctcacagccattccactgtcagcctacggaccaatggcagcggcagcagcggcg
gctatgagaggttccacccagtcacgtaacgcaggctacctgggcaccagcagccctggg
ccaatggctgacctgtatgcggcagccagtcaggactcagcactcagcagctatctcagc
gcagccagtcctggccccaactcaggattcggccacggtctcgggggtcctcttatcgct
actgccttcaccaacggttaccactga
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