Salmo trutta (river trout): 115208096
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Entry
115208096 CDS
T08542
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1-like isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115208096
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115208096
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115208096
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
115208096
mRNA cycle factors
Stress granule specific factors
115208096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
115208096
NCBI-ProteinID:
XP_029631732
Ensembl:
ENSSTUG00000013380
UniProt:
A0A673Y9U7
LinkDB
All DBs
Position
14:complement(40950289..40958068)
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AA seq
707 aa
AA seq
DB search
MSQFQCPGNLMSSPAASPMLPLSQPQPGYSIPCASGPLPSESASHPLLSSALPSGSATPF
SPTSTVSNMANPKEKTPMCLVNELARFNKIQPEYKLLCEQGPAHSKIFSVRLSLGDQHWE
AEGTSIKKAQHSAAATALAQTTLPKPSMRNNPRNNTVDCMTHTVELNAFCMKLGMKPMYK
PIDPYPGMRPSNFNYNIRAPGPYQRSMQQYYYPFPPVGPVLYHMELNIGGQQFHGKGRTR
QLAKHDAAAKALKTLQKEPILLQQLPETNGEDTENFNKSEISQVFEIALKRNMPVNFEVL
KEAGPPHMKSFMVCVAVGEFCGEGEGKSKKIAKKLAATAVLEELRRLPQLSPSVEKIQPA
RIKKKTKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYSMMTERGLPRRREFVMQV
TVCGHCAEGMGPSKKVAKRNAAEKMLELLGFKVPPPQPHKPALKTDERVPQKKNGDGRKV
TFFEPGSVEESQSLGSKAENYRQPYLSHQQLPAGILPMVAEVAQAIGASPSLGHQNKGYG
PRTNPAKATLTAMIANELLYTGTSLTADTILKSQNSMAHLVPHGPLTRPSEQLSYLANVQ
GLQVDYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALSILKLLSELDQQQ
HQQQTNDRTGSGPTSGCGKQDMDGSDSLLIKQANSSTLGQQTLDGTV
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagttccagtgtccgggtaacctaatgtcgagccctgctgccagccccatgctg
ccgctgtctcagccccagccagggtacagtatcccctgtgcctcgggccccctgccctcc
gagagcgccagtcacccgctcctgagctcagccctgccctcgggctcagccactccattc
agtcccacctccacagtatctaacatggcaaaccctaaagagaagacccccatgtgtctg
gtgaatgagttagcccgtttcaataagatccagcctgagtataagctgctttgtgagcaa
ggaccagctcattccaagatcttctcagtgcggttatcactgggggatcagcactgggag
gcagaggggactagtataaagaaggcccagcactctgcagctgccacagccttggcccag
acaacgctgcccaaacctagcatgaggaacaacccccgcaacaacacagtagattgcatg
acacacacggtggagctgaatgccttctgtatgaagctagggatgaagcctatgtacaag
cccatagacccctaccctgggatgaggccatccaacttcaactacaacatcagggccccg
gggccttaccaacgctccatgcaacagtactactacccgtttcccccggtggggccagtg
ttgtaccacatggagctgaacatcgggggccaacagttccatgggaaggggcgcacgcgg
cagctcgccaaacacgacgccgctgccaaggcactgaagactctacagaaagagcccata
ctgctgcagcagctgcctgagacgaatggagaagacacagagaacttcaataaatcagaa
atcagccaggtgtttgagattgcactgaagaggaacatgcctgtcaactttgaggttctg
aaggaggcaggtccgcctcacatgaagagcttcatggtgtgtgtggcggtgggggagttc
tgtggtgagggtgagggcaagagtaagaagatcgctaagaagctggcagctacagccgtg
ctggaggaactgaggagactgccccagctgtcccccagcgtggagaagattcagccagca
cgcattaagaagaaaaccaagtccatcattaagctgcagaccagtccagagtatgggcag
ggcatgaaccccatcagcagactggctcagatccagcaggctaagaaagagaaggagcca
gagtacagcatgatgacggagagggggctgcccagacgcagggagttcgtcatgcaggtg
actgtgtgtggccattgtgcggagggcatgggccccagtaagaaggtagcgaagaggaac
gcagcagagaagatgctggagcttctaggtttcaaagtgcctccgcctcagccccacaaa
cctgcgctcaaaacggacgaaagggtcccgcagaagaaaaatggagacgggaggaaagtg
actttcttcgagccgggctctgtagaagagagccagtcgctgggctccaaggcagagaac
taccgccagccctacctcagccaccagcagctcccagcaggcatcctgcccatggtggca
gaggtggcccaggctatcggggccagccccagcctggggcaccagaacaagggctacggc
ccccggaccaaccctgccaaggccaccctgacggccatgatcgccaacgagctgctgtac
actggtacctccctgaccgccgacaccatcctgaagagtcagaatagtatggctcatcta
gtacctcacggacccctgaccagaccctccgaacagctcagctacctagccaacgtacaa
ggtctacaggtggattacaaagacttccccaaaaacaacaagaatgaatttgtatcgctg
atcaactgctcctcccagccgcctcttatcagccacggcattggcaaggacgtggagtcc
tgtcatgacatggcggccttgagtatcctgaagttactgtcagagctggaccagcagcag
caccagcagcagaccaatgacaggacagggagcggaccaacctctgggtgtggcaaacag
gacatggacggcagcgactctctcctcatcaaacaggctaactcaagcaccttgggacaa
cagactctggatggcactgtgtag
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