Salmo trutta (river trout): 115208150
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Entry
115208150 CDS
T08542
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04020
Calcium signaling pathway
stru04260
Cardiac muscle contraction
stru04261
Adrenergic signaling in cardiomyocytes
stru04270
Vascular smooth muscle contraction
stru04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115208150
04020 Calcium signaling pathway
115208150
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
115208150
09153 Circulatory system
04260 Cardiac muscle contraction
115208150
04261 Adrenergic signaling in cardiomyocytes
115208150
04270 Vascular smooth muscle contraction
115208150
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115208150
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115208150
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
115208150
NCBI-ProteinID:
XP_029631857
Ensembl:
ENSSTUG00000044803
LinkDB
All DBs
Position
14:complement(43925825..43956859)
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AA seq
1834 aa
AA seq
DB search
MAESGGEPNLQSYIMDEETLKRKQKEKLKKLLATGGNPRPTRSLFFLTLKNPFRKAAINI
VEWKPFEIIILLTIFANCVALAVFLPMPEEDSNNTNSNLESLEYIFLIVFSIECFLKIIA
YGFLFHENAYLRNCWNILDFVCVSVGLFAVIGDFITYISGVEAQPGDKGGGFDMKALRAF
RVLRPLRLVSGVPSLQVVMNSILKSMLPLFHISLLVFFMVTIYAIVGLELFKCKMHKTCY
YTGTNIIATVENEKASPCAQAGNGRRCTINGTECRAGWAGPNNGITHFDNLGFAMLTVYQ
CITTQGWTDVLYWVNDAIGMEWPWMYFLTLILVGSFFVLNLVLGVLSGEFTKEREKGKAR
GEYTEMRETQQLDEDLKGYMEWITQAEVMDADGEGQGLLTLEDGESEAGSLKDMDTMQKI
MYYYKLARKWNIFFRRKCLVYVKSRMFYWWVILLVFLNTLAIATEHHQQTQQLTEWQDTA
NKVLLSLFAIEMFMKMYALGLQQYFMSLFNRFDCFVVSTGILELILVRMDVMTVMGISVL
RCIRLLRLLKVTKYWTSLSNLVVSLLNSTPSIACLLLLLFLFIVIFSLLGMQVFGGKFNF
PNAPKPRSTFDSFPQALISVFQILTGEDWNSVMYDGIMAHGGPTMPGILVSIYFIILFVC
GNYILLNVFLAIAVDNLAEAESLTMAQKEKSEEKKRKKLLRANMPDKATEEKALLAKKLA
AERAKIEGIPTTAKLRVDEFESNVNEIKDPFPPADFPGDDEEEEPDIPDTPRPRPMADLQ
LKEEVVPIPEASSFYIFSSDNKIRKLCHRIINATAFTNIILLFILLSSISLAAEDPIDPM
SFRNQVLASADVVFTSVFTVEVVLKMTVYGAIMHPGSFCRNSFNILDLIVVSVSLLSMLM
ESSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLDFMFACI
GVQLFKGKFYACTDPDKMTEEECKGNYIRYQEGAIHPMTIHKREWINAELNFDNILEGML
ALFTVSTFEGWPKLLYKAIDSNMEDVGPVYNNRIAISIFFIVYLILIAFFMMNIFVGFVI
VTFQEQGEQEYKNCELDKNQRACVEYALNARPLRCYIPKNQYQYNVWYIVTSCYFEYLMF
LLIMLNTMCLGMQHCNQSTHVTDLSDMLNVIFTVLFTVEMILKLMAFKAKGYFGDPWNVF
DFVIVIGSVVDVILSEVDAALASSGGLYCLHGCAEVNPMQAIADSENARVSITFFRLFRV
MRLVKLLNRSEGIRNLLWTFIKSLQALPYVALLILMLFFIYAVVGMQIFGKIALIDGTYI
NRNNNFQTFPHAVLLLFRCATGEAWQEVMLACLYGKRCDPKSDYLPGEEMTCGASFAIIY
FMSFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKKIWAEYDPEATGRIKHL
DVVTLLRRIQPPLGFGKFCPHRVACKRLVSMNMPLNSDGTVTFNATLFALVRTALKIKTE
GNFEKANEELRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQDYFRKLKKRQ
EEYYGFRPIKKNAKNEIQAGLRSIEEEAAPELQRAISGDLMNEEEMDRAMEDAAEEGIFR
RAGGLFGNHVDSFTMEEGTRNPNATQVTSQRPLQMSRSDDGESTSSPAYHANEDFFPSTP
NKTNNNNVNNNAGESFSYGIYDRVQVYTISNSRSPPDRDWQLQTVAGPSQDPETHREPLS
PQQAQAQGPDSAFDTLIQEVLINGGLESLARDPRFVSVTKREMTEALNFDPVDMESSATE
LMNGRRGSIATPPIKPPRRSQRKANQSTTPRDVV
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagtggcggcgagcctaacctgcagtcctacattatggacgaggaaactctg
aagaggaagcagaaagagaagctgaagaagctcctggccacggggggaaaccctcggccc
acacgctccctcttcttcctcacactgaagaaccccttccgcaaagctgccatcaacatt
gtggaatggaaaccgtttgagatcatcatcctgctgaccatctttgccaactgtgtggcc
ctggctgtgttcctgcccatgcctgaggaggacagcaataacaccaacagcaacctggaa
agtctggagtacatcttcctcatcgtcttctccatagagtgctttctaaagataatagcc
tatggatttctatttcacgagaatgcatatctgcggaactgttggaacatactcgatttt
gtctgtgtgtctgtggggctgtttgcagtcatcggggacttcatcacctatatcagtggt
gtggaggctcaaccaggggacaagggaggaggcttcgacatgaaggccctcagggcattc
agggtgctccggcccctcaggctggtctctggagtccccagcctgcaggtggtgatgaac
tccatcctgaaatccatgctacctctgttccacatctccctgctggtcttcttcatggtc
accatctacgccatcgtgggactggagctgttcaagtgcaagatgcataaaacctgctac
tacacaggcacaaatatcatagccacagtggagaatgagaaggcatctccgtgtgcccag
gccggtaatggtcggcgctgcaccatcaacgggacagagtgtagggcgggatgggccgga
cccaacaacggcatcacacactttgacaacctgggcttcgctatgctcactgtctaccag
tgcatcactacccagggctggactgacgtgctctactgggtgaatgatgccatcggtatg
gagtggccgtggatgtactttctgacgctcatcttggtcggctccttcttcgtactcaac
ctggttctgggcgtgctcagtggtgaattcactaaggagcgagagaagggtaaggcgcgt
ggagagtacacagagatgagggagacccagcagctggatgaggatctgaagggctacatg
gagtggatcacacaggctgaagtcatggacgccgacggggagggacagggcttgctaaca
ctggaggacggagaatcggaggcagggagcctaaaggacatggacaccatgcaaaaaatc
atgtactactacaagctggctcgtaaatggaacattttcttccggcgtaagtgtcttgtg
tatgtgaagtcccgtatgttctactggtgggtgatccttctggtgtttctgaacacgctg
gccatcgctactgaacaccaccagcagacccagcaactcaccgagtggcaagacactgcc
aacaaggtgctgctgtctctgttcgccattgagatgtttatgaagatgtacgccctgggt
ctccagcaatacttcatgtctctgttcaaccgcttcgactgcttcgtggtctccaccggc
attctggaactcatcctggtccgcatggatgtcatgactgtcatggggatctctgtgctg
cgctgcattcgactacttcggctgctcaaagtaaccaagtattggacgtctctcagtaat
ctggtggtgtccctgctgaactcaaccccctccatcgcctgcctgctcctcctcctcttc
ctcttcatcgtcatcttctctctgctgggcatgcaggtgttcggggggaagttcaacttc
cccaatgcgcccaaaccccgcagcaccttcgacagcttcccccaagctctcatcagtgtc
ttccagatcctgacgggggaggactggaactctgtgatgtatgatggcatcatggcgcat
ggcggtcccaccatgcccgggatcctcgtcagcatctacttcatcatcctcttcgtctgc
ggaaactacatcctgctgaatgtgttcctggccattgctgtggacaacctggcagaggct
gagagtctgaccatggcccagaaggagaagtctgaggaaaagaaacgcaagaagctgctc
agagctaacatgcctgacaaggccacagaggagaaagccctcctggccaagaagcttgca
gcggagagagccaaaatagagggcatcccaaccacagccaagctgagagtggacgagttt
gagtccaacgtgaatgaaatcaaggaccccttcccccctgctgacttccctggtgatgat
gaggaggaggagcctgatatccctgacaccccgaggccacggccaatggcagaccttcag
ctgaaggaggaggttgtgcctattccagaggccagctccttctatatctttagctctgat
aacaagatccgtaagctgtgccaccgcatcatcaacgccaccgccttcaccaatatcatt
ctcctcttcatcctcctcagcagcatctccctggctgccgaggaccccatcgaccccatg
tccttcaggaaccaggtgctggcctccgctgatgtggtcttcacctcagtgttcactgtg
gaagttgtcctcaagatgaccgtatacggcgccatcatgcaccccggctccttctgccgg
aactcctttaatatcctggatctgattgtggtcagcgtatccctcctctccatgctcatg
gagtccagtgctatctctgtggtgaagatcctcagggtgttgagggtgctgaggccccta
agggccatcaacagggccaagggcctcaagcatgtggtccagtgtgtttttgtggccatc
aaaaccatcggcaacatcgtgctggtcaccatgctgctagacttcatgttcgcctgcatt
ggagtccagctcttcaagggcaaattctatgcctgtacagatcctgacaaaatgacagag
gaggagtgcaagggtaactacattaggtaccaggaaggtgccatccatccgatgaccatc
cataagagagaatggatcaatgcagagctcaactttgataacatcctcgaaggcatgctg
gctctcttcactgtctccaccttcgagggctggccaaagttgctctacaaggccatagac
tctaacatggaggacgtgggtccagtgtacaacaaccgcatcgccatctccatcttcttc
atcgtctacctcatcctcatcgccttcttcatgatgaacatcttcgtgggtttcgtcatc
gttacatttcaggagcagggagagcaggaatacaagaactgcgagctggataagaaccag
cgtgcgtgtgtcgagtacgccctgaatgcccggccgctgcgctgctacattcctaagaac
cagtaccagtacaacgtgtggtacatcgtcacctcctgctactttgagtacctgatgttt
ctgctcatcatgctgaacaccatgtgtctggggatgcagcactgtaaccagtcaacccat
gtgaccgacctgtcggacatgctgaacgtgatcttcactgtgctcttcactgtggagatg
atcctcaaactcatggccttcaaagctaagggttactttggagacccatggaatgtcttt
gactttgtcatcgtcatcggcagcgttgttgacgtcatcctgagtgaagtcgatgcagcc
ctggcctcctctggaggactatactgtctccacggctgcgctgaggtgaacccaatgcaa
gcgatagcagactctgaaaatgcccgtgtgtcaatcaccttcttccgactgttccgtgtg
atgcgtctggtgaaactgctgaaccgttctgaagggatccggaaccttctgtggaccttc
atcaagtccttacaggccctgccctacgtcgccctgctcatcctcatgctgttcttcatc
tatgctgtggttgggatgcagatatttgggaagatagcgctaatagacgggacgtacatc
aacaggaacaacaacttccagacattcccccatgctgtgctgctgctcttcaggtgtgcg
acaggtgaggcgtggcaggaagtaatgttggcgtgtctgtatgggaagaggtgtgaccct
aagtcagactacctgcctggggaggagatgacctgtggagccagcttcgccatcatctac
ttcatgagcttttacatgctctgtgccttcctgatcatcaacctgtttgtggcggtcatc
atggacaactttgactaccttacacgtgattggtccattctgggtcctcatcacctggac
gagttcaagaagatctgggcagagtacgacccagaggccacggggcgtattaagcacctg
gacgtggtgactctactgcgtaggatccagcctcctctgggttttggaaagttctgcccc
catagagtagcctgcaagagactggtgtccatgaacatgccactcaacagtgacggaacg
gtcacctttaacgctacgctgttcgcactggtcaggaccgcactgaagatcaagactgaa
ggcaactttgagaaggccaatgaggagctgagggccatcatcaagaagatctggaaacgc
accagtatgaagctgctggaccaggtcatcccaccaatcggagatgatgaggtgaccgtg
gggaagttctacgccaccttcctgatccaggactacttcaggaagttgaagaagagacag
gaggagtactatggcttccgacccatcaagaagaacgccaagaacgagatacaggcaggt
ctgaggagcattgaggaggaggcggctccagagctgcagcgagccatctccggagacctg
atgaacgaggaggagatggacagagccatggaggacgcagcggaggagggtatcttcagg
cgggcgggcggtctgtttgggaaccacgttgattccttcaccatggaggaaggaactcgt
aaccctaatgctacacaggtgaccagccagcggcccctgcagatgagcagatcagacgac
ggggagtctaccagttcacctgcctaccatgcaaacgaggacttcttcccctcaacgcct
aacaaaaccaacaacaacaatgtcaacaacaatgccggggagagcttttcttatggaata
tatgaccgggttcaggtctataccatctcaaacagcagaagtcccccagacagagactgg
cagctgcagacagtagctggacccagccaggaccctgagacccacagagagcccctcagc
ccccagcaggcccaggcccagggcccagacagcgccttcgatacacttatacaggaggtc
ttgataaacggggggttggagagcttggccagggaccctcgttttgtgtcggtgacgaaa
cgggaaatgactgaagcgttgaactttgaccctgtggacatggaaagttccgccaccgag
cttatgaatggtcgcagagggagcattgccacccctccaatcaagccccctcgcagatca
cagagaaaggccaaccaatcaacaacacccagagatgttgtgtag
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