KEGG   Salmo trutta (river trout): 115208248
Entry
115208248         CDS       T08542                                 
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
stru  Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:stru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:stru04121]
    115208248
   03400 DNA repair and recombination proteins [BR:stru03400]
    115208248
Ubiquitin system [BR:stru04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    115208248
DNA repair and recombination proteins [BR:stru03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     115208248
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A GIP1_N UBA_4
Other DBs
NCBI-GeneID: 115208248
NCBI-ProteinID: XP_029632013
Ensembl: ENSSTUG00000036636
UniProt: A0A674CIF6
LinkDB
Position
14:complement(46340625..46381492)
AA seq 1233 aa
MMTSLGGDKARGTRDKALPAATHATQPQKQLQATAEQIRLAQMIYDKNDAEFEDKVNQLM
EVTGKIQDECMVALHDCNEDVNRAINFLLESTSDTTSWETVGKKKPLAKDGSTEGKENRE
KRGGEREGSRGRGGSNRRGRGASNRSRQVERVRTEENDVEAVPGPLDRVSERGRRGGRGG
RGECQLVALSHMFQSTLPVGSGGRGRGRAPAGSRFSAQGMGTFNPADYTPEQGTGTTQGD
AWESGANNSNSTDGTVAWRSTLEDWAAEDWSEEMSLSETKVFTASSAPAPQNHITPGQSL
DLPSLLQKPVGEGRGGGGDAPSTQSLVFTNSHHHPPRNGSAIGTGSTSYAHAALSSVLGA
GFGDLGQSKRSQSSPGAQILEQLKGPGLGPLPSSQAAPPPSTQGASNTSLGSRLPGLGGA
PTVLPPPSTSSWDIKAPEPSATSSSHTSHFSRDFKLQPEPSLVLSQLAQRHGAPSLPIAR
QPSPPPAQSPSPIQGPPLATIGAKPAPSAGPDPQGSNSLQQHRVPQLKAQKRRIPPTSKI
PSSAVEMPGSADVPGLNVQFGALDFGSEAALPDFGPVETCVTGGSRESTPAPQSQTSLYS
NPLSESMSTPLSVPLPLSSSEPVYHSPSVPMSSLAPSMGTVSSSTPSSSISSSVPSSSST
SPFVSVGSGYDCGPVAPHSHLAFSQSKEAPGPIMNGLNGVRTSAMDPSSASSTPKPESPS
LSISTSSAPASSALIPSSIPPHSSALPSLPHDMPSASLAPLSSHGSSSHSSLTYTSVDSS
VSSLAPSSGSYSSAPAQAPAQAPAQAPAQAPAQSLHQVNSGMAHIMGTMSHMNSMVSSMG
GSGHHASQALGLSANGTTAQSNLSSAPRTAPLLSSSTGKAPPNLSQGVPPLLPNQYIMGP
GGLLPAYPQIYGYEDLHMLQSRLPMPSLQDYYGITFPGPAALSGRDGSLANNPYSGEVTK
FGRGDSTSPAPSSLSAQQQPQQGQSQGQNQAQPQPPQPQPQGQPQGHHNSQQQQAFLPPG
YSYTGLPYYPGMPGAAFQYGHTMFMPQGQGPAKQHGVGLGNPSASPFQQQQPSGYGQHTF
SSGYEDLTQGQAGVDYSKGYSNSSQSQAKSAATGPGKGGISVTSGNSGVPEISGSVYNKT
QSFDKQGFHAGTPPPFNLPSAMGGPGGAPGGYAPAPFLHILQPAHQQPHSQMLHHHLAQD
GQGGPSQRGQSSSMQQKSQVNKSSYGSSPYWGN
NT seq 3702 nt   +upstreamnt  +downstreamnt
atgatgacatcgttgggcggcgacaaagcccggggcactcgggacaaagcgctgcctgct
gccacacacgcgactcaaccacagaaacagctccaggcgactgcagagcagatccgcctc
gcccagatgatctatgacaagaatgatgctgaatttgaggacaaagtgaaccagctgatg
gaggtgacaggaaagatccaggatgagtgcatggtagcgctccacgactgcaacgaggat
gtcaacagagccatcaacttcctccttgagagcacctctgatacgacctcatgggagaca
gttgggaagaagaaacccctagcgaaggacggctcgacggagggcaaggagaaccgggag
aagagaggaggagagcgagagggcagcaggggccgcggggggagcaatcggagaggcagg
ggggccagcaaccgcagccgccaggttgagagagtgcggacagaggaaaatgatgtggag
gcggtccctggccctttggacagagtgtcagagcgaggtcgcagggggggaagagggggt
agaggtgagtgtcaattagtggcactttctcatatgttccagtcaacactcccagtcgga
tctggaggcagaggaaggggcagagcaccagcgggaagcaggttctcagcccagggaatg
gggacctttaacccagcagactacaccccagaacaggggacagggaccacacaaggtgac
gcttgggagtcaggggccaacaacagcaacagcacagacgggacagtggcctggaggagt
actctggaggactgggctgctgaggactggagcgaagagatgagtctctccgagaccaaa
gtgttcaccgcctcaagtgcacctgcacctcagaaccacatcacacctgggcaaagtctg
gacctgccctctctgctgcagaagccagtgggagaaggaagaggaggaggaggggatgcc
ccctctacgcagagcctggttttcaccaactcccaccatcaccccccccgcaacgggtcg
gccattggcacgggcagcaccagctatgcacacgccgccctgtcgtcagtgctaggggca
ggtttcggggacctgggccagtctaagaggagtcagtccagtccgggggcccagatcttg
gagcagctgaagggcccgggcctgggtcctctcccatcctcccaggcagccccccctccc
agcactcagggggccagcaacacctctctggggagtagactcccagggctaggaggagcc
cccactgttctcccaccgccttccacttcaagctgggatatcaaggccccagagcccagc
gccacatcctcctcacacacctcccacttcagccgggactttaagctgcagcctgagcca
tccctggtgctgagccagctggcccagagacacggagccccctccctgcccattgctcgc
cagcccagccccccgccagcccaatccccctcccccatccagggaccccccctggccacc
atcggtgccaagcctgcccccagcgccggaccggaccctcaaggcagcaactcgctgcag
cagcaccgcgttccacagctaaaggcccagaaacgaaggatacctcccacctctaagatc
ccctcgtcggcggtggaaatgcctggctctgccgacgtccccggtcttaacgttcagttc
ggagcactggactttggctcggaggcggccctgccggactttggtcccgtggagacgtgt
gtcaccgggggctccagggagtccaccccggccccacagagccagaccagcctctattcc
aatcccctcagtgaatctatgagcacccctctttccgtccccctccctctctcatcctct
gagcccgtctaccactccccgtcggtgcccatgtccagcctggccccctctatgggtaca
gtcagctcctccactccatcctcctccatctcctcctcggtgccctcttcctcttccacg
tctccctttgtctcagtggggagcggttatgactgtgggcctgtggcccctcactcacac
ctggccttctcccagagcaaagaggcacccgggccaatcatgaacggtctgaacggtgtg
aggacgtctgctatggacccttcgtcagcctcctctacgccaaagccggagtctccctct
ctgagcatcagtaccagcagtgcccctgcctcctctgccctcattccctcctccataccc
ccccacagctcagcactccccagtctgccacacgacatgccctctgccagcctggcacca
ctcagcagccatggcagcagtagtcattcctctctcacttataccagtgtagacagtagt
gtgagctctctggcaccctcgtctggctcctactcctctgccccagcccaggccccagcc
caggccccagcccaggccccagctcaggccccagcccagtcactccaccaggtcaacagc
ggcatggctcacatcatgggcaccatgagccacatgaacagcatggtcagtagcatgggt
ggcagcgggcatcacgccagccaagccctggggctcagtgccaacgggaccacggcccaa
tcgaacctctcctcggcccccaggaccgcaccgctgctctcctcctcaactggtaaagct
cctcctaacctgtctcagggggttcccccactactgcccaaccagtacatcatgggccca
ggaggcctgctgcctgcctacccgcagatctacggctatgaggacctccacatgctacag
tccagactgcctatgccctctttgcaggattactacggaatcacattccctggtcccgca
gcactctctggcagagatgggagcctcgccaataacccctactcaggtgaagtcacaaag
tttggcaggggtgactccacctcccctgcacctagcagcttgtcggcccaacagcagccc
caacagggccagagccaagggcagaaccaggcccagccacaacccccccagccccagcct
caaggccaaccccagggccaccacaacagccagcagcagcaggccttcctcccgccaggc
tacagctacacaggcctgccctactaccccgggatgcctggcgctgccttccagtacggc
cacaccatgttcatgccccagggacaggggccagccaagcagcacggtgtgggtctggga
aacccctcagccagccccttccagcagcagcagcccagcggctacggccagcacaccttc
agctcagggtatgaggacctgacccagggccaagcaggagtagactatagcaagggctat
agcaactcctcccagagccaggccaaatctgctgctacaggccccggtaaaggcggcatc
tctgtgacgtcaggcaactccggggtcccagaaatcagtggaagtgtttacaacaagacc
cagtcctttgataagcagggtttccatgcggggactccccctcccttcaacctgccttcg
gctatggggggtcctggaggggccccgggtggctacgctcccgcccccttcctccacatc
ctgcagcctgcccaccagcaaccccactcccagatgctgcaccatcatctggcccaggac
ggacagggaggtcctagccagcgaggccagtctagcagcatgcagcagaagagccaggtc
aacaagtccagctacggcagctccccatactggggcaactga

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