Salmo trutta (river trout): 115208296
Help
Entry
115208296 CDS
T08542
Name
(RefSeq) homeobox protein TGIF1
KO
K19553
homeobox protein TGIF2
Organism
stru
Salmo trutta (river trout)
Pathway
stru04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115208296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115208296
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
115208296
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
115208296
NCBI-ProteinID:
XP_029632095
UniProt:
A0A674EA44
LinkDB
All DBs
Position
14:complement(48306772..48316582)
Genome browser
AA seq
503 aa
AA seq
DB search
MKPFKRALEEERMREQELSAMSESDPFEDDSSTLDLSGGGGGSGKRRRRGNLPKEAVQVL
RSWLYEHRFNAYPSEQEKLSLSDQTSLSVLQICNWFINARRRLLPDLLRKDGKDPTQFTI
SRRAGKGEGRPATGGFGEGSSPESPTSVPSPALPPLRPSVIRPAPTLDLSLLGNTATAIL
LGAGYPSQEGYCVQALMQLDMQSLLRREAKENGSKVISASPTGGLFNTPPPTPPELCPSQ
DFSDLRLLVDAALQRAAEHESQRLFPEYQSRATTEATGGYSHSSSAMGLTTPPAQSQATF
DSPREQSPTNKAVVSPVSVLIHVPVCSAPKLAMASVPAPNVLPHLAQMPVLMPVSTPFPT
FVPAPTFSLVPASTPTPIPTKPLLPAPSPVQSFAGTPTVSCVPTSVPAPSSTKVPTLTSV
PTPAPPVAPAPPALTPFLGLASLQPLSSSIPNSSVQRAQSVPSVWSVVHSDVTVRQPATV
VQTPMAAMWGPQHTLRAVSETVN
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccttcaaacgagctctggaagaggagcggatgcgagagcaggagctgtcagcc
atgtctgagagtgacccctttgaggatgacagctccaccctcgacctgtctggagggggt
gggggctcgggcaagcggcgtcgccgtggcaatctgcccaaggaggcggtgcaggtgctg
cggagctggctgtacgagcaccgcttcaacgcctacccttcagagcaggagaaactcagc
ttgtcagatcagaccagcctttctgtgctgcagatatgcaactggttcatcaatgcccgc
cgccgcctcctccctgaccttctccgcaaggatggcaaagaccccacccagttcaccatc
tccaggcgggcggggaagggtgagggccgcccagccactggaggatttggcgagggtagt
tcccctgaaagccccacctcagtcccctctccggccctgccccctctcaggccctctgtc
atccgaccagcccccacactggacctcagcctcttgggaaatactgccactgccatcctt
ttgggagctggctaccccagccaagagggctactgtgtccaggccctgatgcagctggac
atgcagagtctcctgaggagggaggccaaggagaatggctccaaggttatcagcgccagc
cccactggcgggctattcaacacgccgccccccacacctccggagctgtgccccagccag
gacttcagtgacctgcggttactggtggatgcagctctccagagggccgccgagcacgag
agtcagaggctgttcccagagtaccagagcagggcaactacagaagccacaggtggctac
agccacagcagcagtgctatgggtctgaccactccaccggcgcaaagccaagctacgttt
gactcgcccagagagcagagtcctacgaacaaggctgtggtgtccccagtttcagtccta
attcatgtcccagtctgctctgcacctaaactcgccatggcctctgtaccggctccaaat
gtgcttccccacctagcccaaatgccagtcctaatgccagtttcgaccccttttccaacc
ttcgtcccagcaccaactttctccctggtcccagcttcaactccaactccaatcccaacc
aaaccccttctcccagccccaagccctgttcaaagctttgccggtacgccaactgtgtcc
tgtgtcccaacctcagtcccagctccaagctctaccaaagtcccaaccctaacctctgtc
ccaaccccggccccaccggtagccccagcaccaccagccctcaccccattcctgggccta
gcctccctccagcccttgtcctcctccatccccaacagcagtgtccagagggcccagtcg
gtgcccagcgtgtggagtgtggtccacagtgacgttacagtccgacagcctgccaccgtg
gttcagactcccatggctgccatgtgggggccacagcacaccttgcgcgccgtcagcgaa
acagtcaactag
DBGET
integrated database retrieval system
