Salmo trutta (river trout): 115208357
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Entry
115208357 CDS
T08542
Name
(RefSeq) alpha-1-syntrophin isoform X1
KO
K24063
alpha-syntrophin
Organism
stru
Salmo trutta (river trout)
Pathway
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115208357
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Ortholog
Paralog
GFIT
Motif
Pfam:
Syntrophin_4th
PDZ
PH_17
PH
PDZ_6
PDZ_2
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
115208357
NCBI-ProteinID:
XP_029632200
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Position
14:complement(51628920..51720678)
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AA seq
485 aa
AA seq
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MAATMKAQKTGLLELRVTVDRWIRVLATLTEETLTVSPGEVAEDIVKPNPTPAGAINGDP
ANLSSSPVPETITNVKRTVRVTKQDVGGLGISIKGGKENKMPILISKIFKGLAADQTEAL
YVGDAILSVNGADLRDATHDEAVQALKKTGKEVILEVKYIKEMSAFFKNTSPGAPLPWDS
PPAASQKGAHAPAELKEARTISLKMCQVTRKQCPPDTENRYFEVISSSRKSSVFLRAKDP
IMAQSWYNAIQVGVLGLVPRVRDELRAMQAGLEVKHMGWITEQATQGPERPVLALLTERD
LLLYPTLPDTKDSINSPVKSHPLITTRLVHSGPGKSSPLLDSELSFGLRMGTKQGVETHV
FRVNSAKELSTWTHMLVDGCHNAAELIQEVTTACSWKGKECNLGVHINEGFSLFTEEMGI
RKTVLLQQPFERLRMSSDDGVRMIFLDFGGPEAEIQLDLHSCPKTMVFIIHSFLSAKVKR
LGLLA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacaatgaaggcacagaaaacgggactgttagaacttcgagttaccgtggac
cgttggatccgtgtattagccacacttacggaggagactttaaccgtgagccccggagag
gtcgccgaagacatagttaaacccaacccaactcccgccggtgccattaacggagaccca
gccaacctcagctcctctccggtcccagaaacaatcaccaacgttaagcgcacggtgcga
gttaccaagcaagatgtgggaggacttggaattagtattaaaggtggaaaagagaacaaa
atgcccattctcatctcgaagatcttcaaggggttggcggctgaccagacggaggccctg
tacgtgggtgacgccatcctgtcggtcaacggcgccgacctccgggacgccacacacgac
gaggccgtgcaggccctgaagaagacgggcaaagaagtcatcctagaggtgaaatacatc
aaggagatgtcggccttttttaagaacacctcccccggcgcacccttaccctgggactcc
ccccctgccgcatcacagaaaggcgcacacgcccctgccgagctgaaggaggccaggacc
atatcgctgaaaatgtgccaggtgactaggaaacagtgccccccggacacagagaacagg
tactttgaggtgatctcgtccagcagaaagagctcagtgttcctgagggccaaggacccc
atcatggcccagtcctggtacaacgccatccaggtaggggtcttgggcctggttccccgc
gtcagggatgagttgagggccatgcaggcgggcctggaggtcaaacacatgggctggatc
actgaacaggcgacccagggcccagagagaccggtgctggctctgctgactgagagagac
ctgctgctataccccaccctgcctgacactaaagacagcatcaacagcccagtcaagagc
cacccgctcatcacaaccagactggtccactcgggtccggggaagagctctcccctgctg
gattcggagctctcctttgggctgcgcatgggcaccaagcagggtgtagagacccacgtg
ttccgggtgaactcggccaaggagctttcaacctggacgcacatgctggtggacggctgc
cacaacgccgcagagctcatccaggaagttaccacagcctgcagctggaaagggaaggag
tgcaacctgggagttcacatcaacgagggcttttcccttttcaccgaggagatgggcatc
aggaagacggtgctcctccagcagcccttcgagcgcctgcgcatgtcctctgacgacggc
gtgcgcatgatcttcctcgacttcggagggcccgaggcggagattcaactggacctccac
tcctgtcccaagaccatggtgttcatcatccactccttcctctctgctaaggtcaagcgg
ctaggcttgttagcatga
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