Salmo trutta (river trout): 115208414
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Entry
115208414 CDS
T08542
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04110
Cell cycle
stru04218
Cellular senescence
stru04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115208414 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115208414 (rbl1)
04218 Cellular senescence
115208414 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115208414 (rbl1)
Transcription factors [BR:
stru03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
115208414 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
115208414
NCBI-ProteinID:
XP_029632315
Ensembl:
ENSSTUG00000025860
UniProt:
A0A674ATA6
LinkDB
All DBs
Position
14:complement(56514381..56589735)
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AA seq
1057 aa
AA seq
DB search
MRGDESDSDSGRTDESSVRKSLEMLCQELNMDEQTASEAMQNFKSIWNTYTLEGEVVHWL
ACSLYAACRKGSTPTVGKGVMEGNCVSLTRILRTSKLSLIQFFNKMKKWSDMSNLSQEFR
NRMGRLERTFEVSTVIFRKFEPIFMDMFQDPQGEPPRQPRSRKHRRLPCHVSDVFKFCWT
LFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCSNRKDLVNPLFKGLPSIFRLENN
TPDEPPCVIDRLCELHDGLVVEAKGIKEHYFKPYIKRLFERQILKGNEELLTDLLDTPNF
LDNNKAINREYEEYVLTVGDFDERVFLGADADEEIGTPRKAAPEPRACQLSARMQVESNL
QQHFEKKRTLAPSTPLTGRRYLKEKELLVTPVSSATQSVSRLQSMVSGLRSAPSEALMQI
FKSCSRDPIVAILGRVKTLGETFKQHYTKDSEELPGSHMDFAENRMKLAEILYYKILENV
MAQETRRLHGKDMAVLLEQDIFHCSLMACCLEVVLFAYSSQRTFPWIISIFKLRPFYFFK
VIEVFIRSEEGLSRDMVKHLNSIEEQVLECRAWTADSVLWEALEQAHNKVPTVEEVNFPS
SFDTGNSSAGPSHLPLVALSPIIHPRIREFRTGLSSTRKDIPPSPLSVHDRYSSPAAGSA
KRRLFGDDSSSQAQQSPSLAKRLMFTPGGTLKIDTPTILNMTTANGQQLSIPLQGIKNDL
GGITLIQVQTRGEPGSPITAQVLLTASPSRPIPAPQAQPDPQQSRPRRTGSLALFFRKVY
HLASVRLRDLCVRLDISAELRGKIWTCFEHSIVQCPELMKDRHLDQLLLCAIYIISKITK
DGHTFQDIMKCYRSQPQASSHVYRSVLIRPSSTREQPSDENMEVEPTSGGKSLISAAEKA
DQSSRAEALVQGEERGDLIQFYNSVYVLKIKGFAIRYAAPSMDNRMEAPPLSPFPSMRAQ
PLSPRRISQRHSIYVSPHKNGSCLTPNSAYTYKINGSPSKELTDINRMIRQGGVSRKRAF
SMEGDYLGESPTKRVCPESEDVLLKRLQDVVSERAHH
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgcggggagacgagtcagattccgactccgggcggacggacgagagttccgtccgaaag
agcttggaaatgctttgtcaggagctgaatatggacgaacagacggcatctgaagccatg
caaaacttcaagtcgatttggaatacttacacactggagggggaagtagttcattggcta
gcctgctctctctatgcagcctgcagaaagggctccacacccactgtgggtaagggggtg
atggaaggcaactgtgtgtccctgactcgaatactcaggacgtcaaaactgagtttgatt
cagttctttaacaagatgaagaaatggtcggatatgtccaacttatctcaagaatttcgg
aatcgcatgggccgcctggagagaacctttgaagtgtcaactgtgatctttcggaagttt
gagcccatattcatggacatgttccaggatcctcaaggggaacccccacgacagcctaga
agcagaaaacacaggcgcctgccctgtcacgtcagcgacgtattcaaattctgctggacc
ctgtttgtgtacactaaaggaaatttccgtatgattggcgatgacttggtgaactcatac
cacctcctgctctgctgcttggacttggtgtttggaaatgccctgctatgctccaacagg
aaagaccttgtcaacccacttttcaaaggcttgcccagcatcttcaggttggaaaacaac
accccggacgagccgccatgtgtcatcgatcggctgtgtgagctacacgacggcttggtg
gtggaagccaagggcatcaaggagcactacttcaagccctacattaaaaggctctttgag
cggcagatacttaaagggaatgaggagctgctcacagatctcctggatacaccaaacttc
ctggataacaataaagcgataaaccgggagtatgaggagtatgtactgactgtgggggac
tttgacgagagggtgttcctgggggcggatgccgacgaggagatcgggacacccaggaag
gctgcaccagaaccccgggcctgccagctgtcagcccgcatgcaggtggagagcaacctg
caacagcactttgagaagaagcgcaccctggccccctccactcctctgacaggcaggcgt
tacctgaaggagaaggagctactggtgacccctgtgtcctcggctacgcaaagcgtcagc
cgactccagagcatggtctcgggcctgcgtagcgcccccagcgaggccctgatgcagatt
ttcaagtcatgttcgcgggaccccatcgtagctattctgggcagagtgaaaaccctgggc
gagacgttcaagcaacattacacaaaggactcagaggaactgcctggatcacacatggat
tttgctgagaacaggatgaagctggctgaaatcctctattacaagatccttgagaatgtc
atggcccaagagacaaggaggctacacggcaaagacatggctgtgctgctggagcaggac
atcttccactgctctctgatggcctgttgtctggaggtggtgctgtttgcctacagctcc
cagcgcaccttcccctggatcatcagcatcttcaagctacgaccgttctacttctttaag
gtgattgaggtgttcatccgctcggaggagggtctgtcccgggacatggtgaagcacctg
aactccatcgaagagcaggtgctggagtgccgggcctggacagcagactctgtgctgtgg
gaggccctggagcaggctcacaacaaggtccccaccgtggaggaggtgaacttccccagt
agttttgacacggggaacagcagtgctggtccctcccacctccctctggtggccctctcc
cccatcatccacccccgcatccgcgagtttaggacgggcctgagcagcacacgcaaagac
attcctccgtcgcccttatccgtccacgaccgttacagctccccggcggcgggcagtgcc
aagcggcgtctgtttggggacgacagcagcagccaggcccagcagtccccgtcccttgcc
aagaggctcatgttcacgcccggcgggacgctgaagattgacactcccaccatactcaat
atgaccacagccaacggccagcagctcagcatcccactgcaaggtataaagaatgatctg
ggaggcatcacactgatccaggtgcagaccagaggggagcccggcagtcccattacagcc
caggtcctcttgacagcctcccccagccggcccattccggcaccccaggcccagccagac
ccccaacagagccggccccgacgcaccggctccttggccctcttcttcaggaaggtgtac
cacctggccagtgtgcggctgagagacctgtgtgtgaggctggacatctctgcagagctg
cggggcaagatctggacttgctttgagcactccatcgtccagtgtccagagctgatgaaa
gacagacacctggaccagctcctcctttgtgccatctacataatctctaagattacgaaa
gatggccacacattccaggacatcatgaaatgttaccgcagtcaaccacaagccagcagt
catgtctaccgtagtgtcctcatccggcccagcagcaccagagaacagccgtcagacgag
aacatggaagtggaacccacctctggtggaaaatccttaatttcagctgctgagaaagcc
gaccagagcagcagagcggaggctcttgtccaaggcgaggagcgaggcgacctcatccag
ttctacaactctgtctatgtgctgaagattaagggctttgccatccgatacgccgccccc
agcatggacaacaggatggaggcccctcctctgtccccgttcccctcgatgagagcccag
cccctgtccccccgccgcatctcccagagacactcgatctacgtgtccccacacaagaac
ggctcctgtctcacccccaactctgcctacacctacaagatcaacggcagcccctccaaa
gaactgactgacatcaaccggatgatccgccagggcggggtgagcaggaaaagggccttt
tccatggagggcgactacttgggcgagtcccccaccaaacgggtgtgtcccgagagcgag
gatgtgctgctcaaacggctgcaggacgtggtcagcgagagagcccaccactga
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