Salmo trutta (river trout): 115208463
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Entry
115208463 CDS
T08542
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
stru
Salmo trutta (river trout)
Pathway
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115208463
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115208463
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115208463
Intermediate filaments
Intermediate filament-binding proteins
115208463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
115208463
NCBI-ProteinID:
XP_029632391
Ensembl:
ENSSTUG00000008717
LinkDB
All DBs
Position
14:58582538..58680451
Genome browser
AA seq
2350 aa
AA seq
DB search
MTTVAAEYEHMEITQQYSSSDTVNNRWDEEWDNENSSARLFERSRIKALADEREAVQKKT
FTKWVNSHLSRVSCRITDLYRDLSDGRMLIKLLEVLSGERLPKPTRGRMRIHCLENVDKA
LQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETDGDNKEKRSAKDA
LLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHHNLQNAF
NLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLNGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKTWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVDAATKKHEAIETDITAYEERV
QAVVSVAKELEAEKYHDIKRIAARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEML
YIMDWMDEMKMILLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVNNNAQKFAIDG
DVYKPCDPQVIRDRVAHMEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKE
QILSSDESGKDLTGAVRLLSQHRTLEDEMNGRAAHLQHTIAEGQAMADGGHFGAAKIRER
IADLRAQWAALEELAAVRKAHLEEACALHQFQADADDADAWTLDALRIVSSCEVGHDEFS
TQALVRKHKDAAAEVASYRPVIDALHEQAAALPEEQAQSEEVKGRLAGIEERYKEVAELT
RLRKQSLQDALALYKMFSEADACEVWIDEKDQWLNSMEIPEKLEDLEVIQHRFESLEPEM
NNQASRVAVVNQIARQLMHNGHPSEKDIKAQQDKLNNRWSQFRDLADQKKESLISALGVQ
NYHLDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLRGE
AERLAGEHPDQAKAITGRLAEITAVWEEMKATLRNREESLGEASKLQQFLRELDDFQSWL
SRTQTAIASEETPNTLAEAEKLLAQHDGIKNEICNYEEDYQKMRDMGEMVTQGQTDAQYM
FLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEVFLNNQEYMLAHTEMP
TTLEGAEGAIKKQEDFMTTMDANEEKINGVVEAGRRLASDGNINADRIQERATSIDDRHK
KNREAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIEKDGMQLVSEKPETELVVKEKLSALQKMWEELESTTQTKAQCLFD
ANKAELFTQSCADLDKWLGGLEGQIQSDDYGKDLTSVNILLKKQQILENQVEVRQREVVE
LQSQALVLSQEGKDTGEVDGQRQMVEHKFKELLDPLRKRKNFLVASREIHQFNRDVEDEI
LWVEERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRFDDIFERSESLLMEDSLA
VEAIRQRMADLQQLWGQMIEETEKRHARLEEAHNAQKYYFDAAEAEAWMSEQELYMMSEE
KAKDEQSSVAMLKKHQIVEQSVEDYAETVHQLSKTSRGLTAAGHPESERIGMRQSQVDKL
YAGMKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDAVNRLADELINAGHADAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASYELHKFYHDAKEILGRILDKHKKLPEEVGRDQNTVETLQRMHTTFEHDIQALGTQ
VRQLQEDAVRLQSAYAGDKADDIQRRESEVLEAWNTLLEACDGRRVHLLDTGDKFRFFSM
VRDLMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLA
RKHYASEEIKDKLLQLMDKRKDMIDKWEDRREWLRLILEVHQFGRDAGVAEAWLLGQEPY
LFGRELGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERMRK
PPSPEPLPEQDSPLQSGVENRLQNGLPTDQDSPQNGVDRVEIMNGVAEQNSKDPSPIPSP
TASRRGKGSLSSTLPTQNQDLPAAQLEGFLHRKHEWEGHNKKASSRSWHNVYCVINNQEM
GFYKDNKAAGQGIPYHNAIPISLMGAVCDVAMDYKKKKHVFKLRVTDGNEYLFQAKEEEE
MSTWIQAILNAGTPDKVSITPSNQSTPASSRAQTLPATVTLTNESSPGKREKDKEKDKEK
RFSLFGKKKL
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagctgcggaatatgagcacatggagatcacgcagcagtacagcagcagc
gacacggtcaacaaccgctgggatgaggagtgggacaacgagaacagctcagctcgcctg
ttcgagcgctcgcgcatcaaggccctggcagatgagcgcgaagcagtgcagaagaagacc
ttcaccaaatgggtgaactctcacctctcccgggtgtcctgccgcatcaccgacttgtac
cgggacctgagtgatggacgcatgctcatcaaactgctggaggtgctgtctggggagaga
ctgcccaagcccaccaggggacggatgcgtatccactgcctggagaatgtggacaaggcc
ctgcagttcctcaaggagcagagggtccacctggaaaacatgggctcacatgacatcgtt
gatggcaaccaccgcctcaccctgggcctcatctggaccatcattctcaggttccagatc
caggacatcagtgttgagactgatggagacaacaaggagaagagatcagccaaggacgcc
ctgctcctctggtgccagatgaagactgctggctatccaaacgtgaacattcacaatttc
agcaccagttggcgagatggcatggctttcaatgccctcatccataagcacaggccagac
ctgattgactttgacaaactgaaaaagtccaatgcccaccacaaccttcagaatgccttc
aatctggctgagcagcatcttgggcttaccaagctcctagacccagaggatatcagtgtg
gaccaccccgatgagaagtctgtcatcacatacgtagtgacatactaccactacttctcc
aaaatgaaggcgctgaaagtggaggggaaacgtattgggaaggtactggacaatgccatt
gagacagagaagatgattgagaagtacgagtctctggcctcagacctgctggagtggatc
gagcagaccatcatcatcctcaacaatcgcaagtttgccaactctttaaacggggtgcag
cagcagcttcaagccttcaacacatatcgcacggtcgagaaaccccctaagtttactgag
aagggcaacctggaggtgcttctgtttaccatccagagcaagatgagggccaacaatcag
aaagtctacatgcccagggagggcaaactcatctctgacattaacaagacctgggagaga
ctggagaaggcggagcatgagcgggagctggctctgaggacggagctgattcgacaggag
aaactggagcagctggctcgtcgctttgatcgcaaggctgccatgagggagacctggctg
agtgagaaccagcgcctcgtctcacaggacaactttggcttcgacctgccggcggtggac
gcggccaccaagaagcatgaggccatcgagacggatattacagcatacgaggagcgtgtg
caggccgtggtgtctgtcgctaaggagctggaggcagagaagtaccacgacatcaaacgc
atcgcagcgcgcaaggacaacgtgatccggctgtgggagtacctgctggagcttctgaag
gcgaggcgccagcgcctggagatgaacctgggtctgcaaagggtcttccaggagatgctt
tacatcatggactggatggacgagatgaagatgatactgctatcccaggactatgggaag
catctgctcggagtggaggatctcctgcagaaacatgccctggtagaggccgacattggc
atccaggctgaccgtgtcaaagctgtcaacaacaatgctcagaagttcgccatcgacggg
gacgtttacaagccctgtgaccctcaggtaatacgcgaccgcgtggcccacatggagttc
tgctaccaggagctgacccagctggctgccgagcgccgggcccgcctggaggagtcccgc
cgcctctggaagttcttctgggagatggccgaggaggagggctggatccgtgagaaggag
cagatcctgtcgtcggacgagagcggcaaggacctgacgggcgctgtgcgcctgctgagc
cagcaccgcaccctggaggacgagatgaatggccgtgccgctcacctgcagcacaccatt
gccgagggccaggccatggctgacggtggccacttcggtgccgccaagatccgcgaacgc
atcgccgacctgcgggcgcagtgggcagcgttggaggagctggcggctgtgaggaaggcc
catctggaggaagcatgtgccctgcaccagttccaggcggacgcagatgatgccgacgcc
tggaccctggacgccctgcgcatcgtgtccagctgcgaggtgggccatgacgagttctcc
acacaggccctggtgcgcaagcacaaggacgccgccgccgaggtggccagctatcggcca
gtgatcgatgcgctccatgagcaggcggccgccttgcctgaagagcaggctcagtcggaa
gaggtcaaaggccgcctggcaggcatagaggagcgctacaaggaggtggccgaattgacc
cggctgagaaagcagtcactgcaggacgccctggccctctacaagatgttcagcgaggcg
gacgcctgcgaggtgtggatcgatgagaaggatcagtggctcaacagcatggagatccca
gagaagctagaagacctagaggtcattcagcacaggttcgagagcctggagcctgagatg
aacaaccaggcatcacgcgtcgctgtcgtgaaccagatcgccaggcagctgatgcacaac
ggacaccccagtgagaaggacatcaaagcccagcaagataagctcaataacagatggagc
caattccgggatctggcggaccagaagaaggagtctctaatctcggcgctgggtgtgcag
aactaccacctggactgcaacgaaaccaagtcgtggatccgcgagaagacaaaggtcatc
gagtccacccaagagctgggcaacgacctgacgggtgtcatggcgctgcagcgtaaactc
actggcatggagcgtgacctggctgccatcgaggacaagctgggagacctgcgcggcgag
gccgagcggctggccggcgagcacccggaccaggccaaggccatcacgggccgcctggcc
gagatcaccgccgtgtgggaggagatgaaggccacactgcgtaaccgcgaagagtccctt
ggcgaggccagcaagctgcagcagttcctgcgcgaactggatgacttccagtcgtggctg
tcgcgcacacagacagccatcgcctcggaggagacgcccaacacgctggctgaggcagag
aagctgctagcacagcacgacggcatcaaaaatgagatctgcaactacgaggaggactac
cagaagatgcgcgacatgggcgagatggtgacccagggccagaccgatgcccagtacatg
ttcctgaggcagcggctacaggcactggacacgggctggaacgagctgcacaagatgtgg
gagaaccggcagaacctgctgtcacagtcccacgcctaccagctgtttctcagggacacc
aagcaggccgaggtcttcctcaacaaccaggagtacatgctggcccatacagagatgccc
actacacttgagggggccgaaggagccatcaagaagcaggaggacttcatgaccaccatg
gacgccaacgaagagaagataaacggcgtggtggaggctggcaggcggctggcgagcgac
ggcaacatcaacgccgaccgcatccaggagagagcgacgtctattgacgacaggcataag
aagaaccgtgaggctgctgtggagctactgatgaggctgaaggataaccgggaccttcag
aagttcctacaggattgccaggagctgtctctgtggatcaacgagaagatgctcacggcc
caggacatgtcgtacgacgaggccaggaacctccacagcaaatggctcaagcatcaggcc
ttcatggctgagttgcagtccaacaaggagtggctggacaagattgagaaggatgggatg
cagctggtgtcggagaagcctgagacagagttggtggtgaaggagaagctctcagccctc
cagaagatgtgggaagagttggagtccaccacccagaccaaggcccagtgcctgtttgac
gccaacaaggccgagctgtttacacagagctgtgccgacctggacaagtggctgggtggc
ctggagggccagattcaatcggacgactacggcaaagacctgaccagcgtcaacatcctg
ctcaagaagcagcagatattggaaaaccaggtggaggtccgtcagagggaggtggtggag
ctgcagagccaggcgctggtcctcagccaggaagggaaggacacgggggaggtggacggc
cagagacaaatggtggagcacaagttcaaagagctgctggacccgctgaggaagagaaag
aacttcctggtggcctcccgcgagatccaccagttcaaccgagatgtagaggacgagatt
ctttgggtcgaagagaggatgccaattgcaacctccacagatcatggtcacaacctgcag
accgttcaactgcttatcaagaaaaatcagaccttgcagaaggagatccagggacaccag
ccccgcttcgatgacattttcgagcggagcgagagcctgctgatggaggacagccttgcc
gtggaggccatccgccagcgcatggccgacttgcaacagctgtggggccagatgattgag
gagacggagaagcgtcacgcccgactggaggaggcccacaatgcacagaagtactacttt
gatgccgctgaggctgaggcctggatgagcgagcaggagttgtacatgatgtctgaagag
aaggccaaggatgagcagagctccgtagccatgctgaagaagcaccagattgtggagcag
tcggtggaagactacgctgagacagtccatcagctctccaagaccagcagaggcctgaca
gctgcaggacatccagagagtgagaggataggcatgcgtcagtctcaggtggacaagctc
tatgccggcatgaaggacctgtctgaggagaggaggggcaaactggacgagcggttccgt
ctgttccagctcaaccgcgaggttgacgacttggagcagtggattgccgagcgggaggtg
gtggctggatctcatgagctgggacaggactacgagcatgtcaccatgctccaggagcgc
ttccgggagtttgcgcgcgacacaggcaacatcggccaggagcgtgtggatgccgtcaac
cgcctggccgatgagctgataaatgcgggccacgcagatgccgccacggtggccgagtgg
aaggatggactcaacgaggcctgggctgacctgctggaacttatcgacacgcgcacgcag
atcctggccgcctcctacgagctgcacaagttctaccatgacgccaaggagatcctgggc
cgcatcctggacaaacacaagaaacttccagaggaggtgggacgtgaccagaatacagtg
gagacactgcagaggatgcacaccacctttgagcatgacatccaggccctgggaacacag
gtgaggcagctgcaggaggatgccgtccgcctccagtcggcctacgccggcgacaaggca
gacgacatccagcggagggagagcgaggtgctggaggcctggaataccctgctggaggcc
tgcgatggccgcagggtccacctcctggacacgggcgacaaattccgcttcttcagcatg
gtgcgcgacctcatgctgtggatggaggacgtcatccgtctcatcgaagcccaggagaat
ccaagggacgtgtcctctgtggagttgttgatgaacaaccaccagggtatcaaggctgag
atcgacgcccgcaatgacagcttcaccgcctgcattgagttgggcaagtctctgctagcc
agaaagcactatgcatcagaggagatcaaagataagttgctacagctgatggacaagagg
aaagacatgattgacaagtgggaggaccgacgggagtggttaagactgattttggaagtt
caccagtttgggagggatgcaggggtggcagaggcgtggctgctgggacaggagccatac
ctgttcggccgggagttggggcagagcgtggacgaggtggagaaactgatcaagaggcac
gaggcgttcgagaaatcggccgccacttgggaggagcgcttctcggcgctggagaggttg
actacgttggagttattggaagtgagaagacagcaagaggaagaagaaagaatgcgaaaa
cccccttcgccggagcctttaccggagcaggactcaccactgcagagtggagtagagaac
agactgcagaacgggctgcccacagaccaggattccccacagaatggtgttgacagagtt
gagatcatgaatggagtggcggagcagaactcaaaggacccgagccccattccctcaccc
acagccagccggcggggaaagggcagcctgtcctccacgttgccgacccagaaccaggat
ttgcctgcggctcagctggagggcttcctgcatcgcaagcatgagtgggagggtcacaac
aagaaggcctcaagcagatcctggcataacgtgtactgcgttatcaacaatcaggaaatg
ggcttctacaaagacaacaaggctgctggtcaaggcatcccctaccacaatgcgattccg
atcagtctaatgggggctgtgtgtgatgtggccatggattacaaaaaaaagaagcatgtc
ttcaaactcagagttacggatggaaatgagtatctcttccaagccaaagaagaagaggag
atgagcacatggatccaggccattctgaatgcggggacacctgacaaggtatcaattacg
cccagcaaccagagcactccggcgtcgagccgagcccagaccctgcccgctaccgtcacc
ctcaccaacgaatccagcccgggcaagcgggagaaagacaaggagaaggacaaggagaag
cgattcagcctcttcggcaagaaaaaactatga
DBGET
integrated database retrieval system
