Salmo trutta (river trout): 115208481
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Entry
115208481 CDS
T08542
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
stru03015
mRNA surveillance pathway
stru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115208481
09122 Translation
03013 Nucleocytoplasmic transport
115208481
03015 mRNA surveillance pathway
115208481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115208481
03041 Spliceosome [BR:
stru03041
]
115208481
03009 Ribosome biogenesis [BR:
stru03009
]
115208481
03012 Translation factors [BR:
stru03012
]
115208481
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115208481
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115208481
mRNA cycle factors
Stress granule specific factors
115208481
Spliceosome [BR:
stru03041
]
Complex C
Other components
EJC/TREX
115208481
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
90S particles
Helicases
115208481
Translation factors [BR:
stru03012
]
Eukaryotic type
Initiation factors
eIF-4
115208481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
TniB
Motif
Other DBs
NCBI-GeneID:
115208481
NCBI-ProteinID:
XP_029632425
Ensembl:
ENSSTUG00000015029
LinkDB
All DBs
Position
14:59361402..59369703
Genome browser
AA seq
406 aa
AA seq
DB search
MEVATVPRTRRLLKEEDMTKIEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHSCIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagccaccgtaccacgcacgaggcgtctattgaaggaggaagacatgaccaag
atcgagtttgagaccagcgaggaggtcgatgttacgcctaccttcgacacaatgggccta
cgagaggatctcctccgtgggatctacgcatacggattcgagaagccttccgcaatccaa
caaagagcaattaaacagatcatcaagggtagagatgtcattgcacagtctcagtcagga
acaggaaagactgccacattttgcgtatcagtgctgcagtgtcttgacattcaggtgcgt
gaaacccaggcactgatcctggctcccaccagagagttggctggacagatacagaaggtg
ctcctggccctcggtgactacatgaacgtacagtgtcattcctgcatcggagggacaaac
gtgggtgaggacatccgcaaactggactatggccagcacgtagtagcagggacccctggg
agagtgtttgatatgatccgcaggaggagtttgaggacacgtgccatcaagatgctggtg
ctggacgaagcagacgaaatgctcaacaagggtttcaaagagcagatctacgacgtgtac
cggtacctgccacccgccacccaggtgtgtctgatcagcgccacgctgccccacgagatc
ctggagatgaccaacaagttcatgaccgaccccatccgcatcctggtcaaacgtgatgag
ttgactctggagggcatcaagcagttcttcgtggcagtagagagggaggagtggaagttt
gacaccctgtgtgacctgtatgacaccctcaccatcacgcaggctgtcatcttctgcaac
accaagcggaaggttgactggctgactgagaagatgagggaggccaacttcactgtttcc
tccatgcatggagacatgccccagaaggagagagagtccatcatgaaagagttccggtcc
ggcgccagccgagtgcttatctcaactgatgtgtgggcccgaggtctggatgtgccccag
gtgtccctcatcatcaactacgacctgcccaacaacagagagctgtacatccacaggatt
ggccgatcgggtcgttatggccgcaagggtgtggccatcaactttgtgaagaacgacgac
atccgtattctccgtgacattgagcagtactattccacacagatcgatgaaatgccaatg
aacgtggctgacctgatctaa
DBGET
integrated database retrieval system
