Salmo trutta (river trout): 115208525
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Entry
115208525 CDS
T08542
Name
(RefSeq) spastin-like isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115208525
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115208525
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
115208525
Membrane trafficking [BR:
stru04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
115208525
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
115208525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_22
AAA_5
TIP49
Vps4_C
Mg_chelatase
IstB_IS21
AAA_16
AAA_14
DUF815
AAA_24
nSTAND3
RNA_helicase
NPHP3_N
AAA_2
MIT
Motif
Other DBs
NCBI-GeneID:
115208525
NCBI-ProteinID:
XP_029632513
Ensembl:
ENSSTUG00000024606
LinkDB
All DBs
Position
14:61455608..61507812
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AA seq
598 aa
AA seq
DB search
MSSPGGRGSRKKRGPAGSPPDGGATCDQVSLHKRNLYYFSYPLLALFAVLRVLVLHFGEL
FAWLCERMSRAMAARPKQRAADEHANKVCEQDIGEQIRNHHKQAFEYISVALRIDEDDKV
HKEQAVQWYKRGIAELERGIAIEVAENGEKYERDKRLQAKMITNLIMAKDRLELLEKLRS
GPAQRDIYAESSNQSYHNGYLRSVSGAVPKKRDSLTTHSSHSLPRPKHTPKKTSAAGHGG
LQRSPSFIGPSSSHTQHRLAPQSNRNKSKAGNWQNCKPTTTTTPTSMSPLKKRDMKNLKN
VDSKLANLILSEIIDSGSSVRFEDVAGQELAKQALQEIVILPALRPELFTGLRAPARGLL
LFGPPGNGKTMLAKAVAMESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIF
IDEIDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDERVLVMGATNRPQELDEAVLRR
FAKRVYVALPTEETRLKLVKNLLGKHGNPLTQKELSQLARLTEGYSGSDLTSLAKDASLG
PIRELRPEQVRNMAANEVRNIRFSDFVESLKKIKKSVGPQTLDLYVRWNKDYGDTTGA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccgggaggaagaggcagcagaaagaagcgaggccctgcagggtccccgccc
gacggaggggccacctgcgaccaagtgtcactacataaacgaaatttgtactacttctca
tacccactgctggcgttgtttgcagtgctccgtgtcctcgtcttgcattttggcgaactc
ttcgcctggctgtgcgagcggatgtctcgtgctatggctgcgagacccaaacaacgggca
gcagacgagcatgcgaacaaggtgtgcgagcaggacatcggcgagcagatccgaaaccac
cacaaacaagcattcgagtacatctcagtggctctgagaattgacgaggatgacaaagtg
cacaaggaacaggcagtccagtggtacaaacgcggaatcgcagagctcgagaggggcatt
gcgatcgaggtagctgaaaatggcgagaaatatgaacgtgataaacgtctacaggccaag
atgatcaccaatctgatcatggcaaaggatcgcctggagcttttagaaaagctgcgttca
gggccagctcagagagacatctatgcagagagctcaaaccagtcataccataacggttat
ctacgctcagtaagtggagccgtacccaaaaagagggactccctgactactcactccagt
cactccctcccacgaccaaagcatacgccaaaaaaaacctcggcggcaggccatgggggc
ctccagcgctcccccagcttcattgggccctccagcagtcacacacagcacagactggcc
cctcagtccaacagaaacaagagtaaagcgggcaactggcaaaactgtaaacccaccacc
accaccactcccacatccatgtccccactgaagaagagggacatgaagaacttgaagaat
gtggacagcaagcttgccaacctcatcctcagcgagatcatagacagtggctcatctgtg
aggtttgaggacgttgctggccaggagctggctaagcaggccctacaggaaatagtcatc
ctgcctgcactgaggccagagttgtttacaggtttgagggctccagcacgaggccttctg
ctcttcggtcctcctggcaacggaaagacgatgctggctaaagcagtggccatggagtcc
aacgccacattcttcaacataagtgcagccagcttgacctcgaaatatgtgggggaggga
gagaagctggtgcgagctctgtttgccgtcgccagagaactgcaaccctcgatcatcttc
atagatgagatcgacagtctactctgtgaaaggagagagggagagcatgatgccagcaga
cgactgaagaccgagttcttgattgaatttgatggggtgcaatctggtggggatgaacgg
gtgttggtgatgggagccaccaacaggcctcaggagctggacgaggctgttctaaggcga
tttgcaaaacgggtgtacgtggctttaccaacagaagagacacggctaaaactggtcaag
aaccttttagggaagcacgggaatcctctcacacagaaagaactgtcccagcttgccaga
ttgacagaaggctactctggcagtgacctgacctcgctggccaaagatgcgtccctcggt
cccatcagagagttgcgcccagaacaagtcaggaacatggccgcaaacgaggtgaggaat
atcaggttctctgatttcgtggagtcactgaagaagatcaagaagagtgtcggaccacag
acgctggacctgtatgtgcgctggaacaaggactatggggacacaacaggtgcatga
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