Salmo trutta (river trout): 115208608
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Entry
115208608 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04120
Ubiquitin mediated proteolysis
stru04137
Mitophagy - animal
stru04144
Endocytosis
stru04340
Hedgehog signaling pathway
stru04350
TGF-beta signaling pathway
stru04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115208608
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
115208608
04350 TGF-beta signaling pathway
115208608
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115208608
04137 Mitophagy - animal
115208608
09144 Cellular community - eukaryotes
04520 Adherens junction
115208608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115208608
04121 Ubiquitin system [BR:
stru04121
]
115208608
03029 Mitochondrial biogenesis [BR:
stru03029
]
115208608
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115208608
Membrane trafficking [BR:
stru04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
115208608
Autophagy
Mitophagy
Other mitophagy associated proteins
115208608
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
HECT type E3
115208608
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
115208608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
115208608
NCBI-ProteinID:
XP_029632658
Ensembl:
ENSSTUG00000035451
LinkDB
All DBs
Position
14:64275293..64358488
Genome browser
AA seq
796 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLSKKDFFLVNTILHFGSSSTGLPDPFAKVVVDGSGQC
HSTDTVRNTLDPKWNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRL
KDTGYQRLDLNKLGPNDNDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERR
TASGRIQYLNHITRTTQWERPTRPASEYSSPSGRPLSCVVDENTPVMTPNGAAIGVLPSS
GSDPRVQERRVRSQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDP
RVPRDLSNVNCEELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPNG
PGPNGSRVAMESQSQNTNISSRQSNQLKEQQPPPQVPALSPAQLPEEAECLTVPKYKRDL
VQKLKILRQELSNQQPQAGHCRIEVCREEIFEESYRQVMKMRPKDLWKRLMVKFRGEEGL
DYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGM
AVFHGHYIDGGFTLPFYKQLLGKPITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVE
HNAYGEIIQHELKPNGKTVSVSEDTKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPQH
LLKSFDEKELELIVCGLGKIDIADWKSNTRLKHCTTDSNVVKWFWKAVESYDEERRARLL
QFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDANTNNLPKAHTCFNRIDVPAYEHYDKLY
DKLLTAIEETCGFAVE
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcaaggagttaggagaaatggcccagtgaaactgcggttgacagtgctgtgt
gcgaagaacttgtcaaagaaagacttcttccttgtgaatacaatcctccattttggctcc
tcctccacagggctgcctgacccctttgccaaagtggtggtggacggctcggggcaatgc
cactccacggacaccgtgaggaacacgctggaccccaagtggaaccaacattacgacctg
tacattgggaagtctgattccatcaccatcagtgtgtggaaccacaagaagattcacaag
aagcagggggctggcttcctgggctgtgtacgccttctctccaacgccatcaaccgcctc
aaagacaccggctatcagagactggacctgaacaagctgggccccaatgacaacgacaca
gtgagaggccagatagttgtgagtctacagtccagagaccgtatcggcacaggaggcccc
gtggtagactgcagccgtctgtttgataatgatttacctgatggctgggaggagaggaga
acagcctctggtcggatccagtaccttaaccacatcacacgcaccacgcaatgggagagg
cccacccggccggcgtctgagtactccagcccctccgggcggcccctcagctgcgtggtg
gatgagaacacgccggtcatgacacccaacggggcagccatcggtgtgctgcccagcagt
ggcagtgacccgcgggtccaggagagacgcgtccgctcccagagacacaggaactacatg
agcaggacccacctccacactccaccggacctgccagagggatacgagcagagaaccacg
cagcagggccaggtgtacttcctccacacccagacgggtgtcagcacatggcacgaccct
cgagtgcccagggatctgagcaacgtcaactgtgaggagctgggtcctctgccgcctggc
tgggagatccgcaacacggcaacgggacgcgtctactttgtggaccacaacaaccgaacc
acgcagttcaccgacccgcgcctctccgccaacctccacctggtcctcaatccaaacggc
cctggtccaaacggttcccgcgtggccatggagagccagagccagaacactaacatcagt
agtcgtcagtcgaaccagttgaaggagcagcagccccccccgcaggtcccggcgttgtcc
ccggcccagctccccgaggaggcggagtgcctcaccgtgcccaagtacaagagggacctg
gtccagaagctcaagatcctccggcaggagctgtccaatcagcagccccaggcaggacac
tgtcgcatcgaggtctgccgcgaggagatctttgaggagtcataccgccaggtgatgaag
atgcgtcccaaggacctgtggaagagactgatggtcaagttcagaggagaggagggcctg
gactacggaggagtggccagggagtggctgtacctgctgtcccatgagatgttgaacccc
tactacggcctgttccagtactccagagacgacatctacaccctgcagatcaacccagac
agcgccgtcaacccggagcacctgtcctacttccactttgtgggtcgtatcatgggcatg
gcggtgttccacggccattacatagacgggggcttcaccctgcccttctacaaacagctg
ctggggaaacccatcaccctggacgacatggagtcagtggacccagacctccacaacagc
ctggtctggatcctggacaatgacatcacgggggtgctggaccatacgttctgtgtggag
cacaatgcctacggagagatcatccagcacgaactgaagcccaacggcaagactgtctct
gtctccgaggacaccaagaaggagtatgtcaggctctatgtgaactggcggttcctccac
ggcatcgaggctcagttcctggccctgcagaagggcttcaacgaggtcatcccccagcac
ctgctcaagtcctttgacgagaaggaactagagttgatagtgtgtggcctggggaagatc
gacatagcagactggaagagcaacacgcgcctgaagcactgcaccacggacagcaacgtg
gtcaagtggttctggaaggccgtggagtcctacgacgaggagaggagggccagactgctg
cagtttgttaccgggtcatctagagtcccactgcagggattcaaggctttacaaggtgcc
gcggggcccaggctcttcacaatccaccagatcgatgccaacaccaacaatctacccaaa
gcccacacctgctttaaccggattgacgttcccgcctacgagcactatgacaagctgtat
gacaagctgctgacagccatcgaggagacgtgtggctttgcggtggaatga
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integrated database retrieval system
