Salmo trutta (river trout): 115208655
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Entry
115208655 CDS
T08542
Name
(RefSeq) THO complex subunit 4-A-like
KO
K12881
THO complex subunit 4
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
stru03015
mRNA surveillance pathway
stru03040
Spliceosome
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115208655
09122 Translation
03013 Nucleocytoplasmic transport
115208655
03015 mRNA surveillance pathway
115208655
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115208655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115208655
03041 Spliceosome [BR:
stru03041
]
115208655
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115208655
TREX complex
115208655
Spliceosome [BR:
stru03041
]
Complex C
Other components
EJC/TREX
115208655
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
115208655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
115208655
NCBI-ProteinID:
XP_029632739
Ensembl:
ENSSTUG00000044344
LinkDB
All DBs
Position
14:65516479..65519372
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AA seq
272 aa
AA seq
DB search
MADKMDMSLDDIIQQSKKGGGGRGNRGGRSRGSSGRGGSGGRPGGAGSGGRTGGSGPMRS
RQNFSGDRSDSRPTPYSRPRELPDKWQHDMFEGGFGSNAGGGGGAGGGGVETGGKLLVSN
LDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSQGTADVHFERRADALKAMKQYNNVPLD
GRAMSIQHVTSQIRDDNQRRPSQSSNGGSGGFNRDRIGRPNFSDRRGGGDRRAGGGSRGR
GRGGRGGGKPQQLSAEELDAQLDAYNAKMETS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagatggatatgtctttggatgacattattcaacaaagtaagaaaggtgga
ggtggccgcggaaatcgaggaggccgcagccgaggatcatcgggtcgaggtgggagtgga
ggccgacccggtggagctggctctggaggccggaccggcggatccgggcccatgaggagt
cgacagaacttcagtggcgatagaagcgacagcagacccacgccatacagcaggcccaga
gagctgccggacaaatggcaacacgacatgttcgaaggtggcttcggcagtaatgctggc
ggtggtgggggagcaggtggtggcggtgtggagactggcggcaagctccttgtctcaaac
cttgacttcggtgtctctgacgctgatatccaggagttgtttgcggaattcggtacattg
aagaaagcggctgtgcactatgaccggtctggccgcagccagggaaccgctgacgtccac
tttgagaggagggctgatgcactcaaagccatgaaacagtacaacaatgtaccactcgat
ggccgcgccatgagcattcagcacgtcacctcacaaatccgagatgataaccagagacga
ccatcacagagttcaaacggaggcagtggtggattcaacagagacagaattggacgccca
aatttctcagacaggcggggaggtggggacaggcgggccggcggaggctccaggggcagg
ggtagaggtggacgtggtggaggcaaaccgcagcagttgtctgctgaagagctggatgcc
cagttggatgcttacaatgctaagatggagaccagttag
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