Streptomyces sp. VN1: EZV63_00130
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Entry
EZV63_00130 CDS
T10674
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
strv Streptomyces sp. VN1
Pathway
strv00521
Streptomycin biosynthesis
strv00523
Polyketide sugar unit biosynthesis
strv00525
Acarbose and validamycin biosynthesis
strv00541
Biosynthesis of various nucleotide sugars
strv01055
Biosynthesis of vancomycin group antibiotics
strv01100
Metabolic pathways
strv01110
Biosynthesis of secondary metabolites
strv01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
strv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EZV63_00130 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EZV63_00130 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
EZV63_00130 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EZV63_00130 (rfbB)
00525 Acarbose and validamycin biosynthesis
EZV63_00130 (rfbB)
Enzymes [BR:
strv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
EZV63_00130 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
RmlD_sub_bind
NmrA
MoCF_biosynth
Motif
Other DBs
NCBI-ProteinID:
QIP68495
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Position
29377..30411
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AA seq
344 aa
AA seq
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MSRSNRVAVTGGAGFIGSHYVRQILSGAYPEFADASVVVLDKLTYAGNEENLAPVSADRR
FELVVGDVCDADLLADVLPGVDVVVHFAAESHVDRSITGPADFMHTNVQGTHTVLNACLD
AGVRRVVQVSTDEVYGSIDAGSWTEDHPLEPNSPYSASKASADLVARSYFRTYGLPVCVT
RCSNNYGRYQFPEKIIPLFITNLLEGQELPLYGDGSNVRDWLHVDDHCRAIQLVVEGGRP
GDVYNIGGGTELTNRDLTAQLLKETGSDWSSVRHVPDRPGHDQRYSVDWTKIKNELGYTP
RVDLADGLADTVRWYVENEAWWGPLRRAAPQRHTGPHSPTGVTA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcagtaaccgtgtggccgtcaccggaggcgccgggttcatcggttcgcactac
gtgcggcagatcctctcgggcgcgtacccggaattcgccgacgcctccgtcgtcgtcctc
gacaagctgacctatgcgggcaacgaggagaacctggctccggtctccgccgaccggcgg
ttcgagctggtggtcggagacgtctgcgacgcggacctgctggccgacgtgctgccgggg
gtggacgtcgtcgtgcacttcgccgcggagtcccacgtggaccgctcgatcaccggtccg
gccgatttcatgcacaccaacgtgcagggcacccacaccgtactcaacgcctgcctggac
gcgggcgtgcggcgggtcgtgcaggtgtcgaccgacgaggtctacggctcgatcgacgcc
ggttcctggaccgaggaccacccgctcgaaccgaactcgccgtactcggcgtccaaggcg
agcgcggacctcgtcgcgcgctcctacttccggacctacggactcccggtgtgcgtcacg
cggtgctcgaacaactacggccgctaccagttccccgagaagatcattccgctgttcatc
acgaacctgctggagggccaggagctcccgctgtacggggacggcagcaacgtgcgcgac
tggctccacgtggacgatcactgccgcgccatccagctggtggtcgagggcggccgcccg
ggtgacgtctacaacatcggcggggggacggagctcaccaaccgcgacctcacggcgcag
ctgctgaaggagacgggctcggactggtcctcggtgcggcacgttcccgaccgtccgggc
cacgaccagcggtattcggtggactggacgaagatcaagaacgagctgggctacacaccg
cgcgtcgacctggcggacggactcgccgacacggtccgctggtacgtggagaacgaggcc
tggtggggaccgctccgccgggcggcgccccagcggcacaccggcccgcactcccccacc
ggagtgacggcctga
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