Streptomyces sp. VN1: EZV63_05820
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Entry
EZV63_05820 CDS
T10674
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
strv Streptomyces sp. VN1
Pathway
strv00750
Vitamin B6 metabolism
strv01100
Metabolic pathways
strv01240
Biosynthesis of cofactors
Module
strv_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
strv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
EZV63_05820 (pdxS)
Enzymes [BR:
strv01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
EZV63_05820 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
IGPS
TetR_C_27
His_biosynth
Motif
Other DBs
NCBI-ProteinID:
QIP69462
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All DBs
Position
complement(1333207..1334118)
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AA seq
303 aa
AA seq
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MSSTLSETQATETGTARVKRGMAEQLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPAD
IRKDGGVARMSDPDMIEGIIGAVSIPVMAKSRIGHFVEAQVLQSLGVDYIDESEVLTPAD
EVNHSDKFAFTTPFVCGATNLGEALRRIAEGAAMIRSKGEAGTGNVVEAVRHLRQIKSGI
ARLRGCDNNELYAAAKELRAPYELVREVSELGRLPVVLFSAGGVATPADAALMRQLGAEG
VFVGSGIFKSGDPARRAAAIVKATTFYDDPKTIADASRDLGEAMVGINCDTLPETERYAN
RGW
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtgtccagcacgctctccgaaacccaggccaccgagaccggcaccgcccgcgtgaagcgc
ggcatggccgagcagctcaagggcggcgtgatcatggacgtcgtcactccggagcaggcg
aagatcgccgaggacgcgggcgccgtcgccgtcatggccctggagcgcgtcccggccgac
atccgcaaggacggcggtgtggcccggatgtccgacccggacatgatcgagggcatcatc
ggcgccgtctccatccccgtgatggccaagtcccgcatcggccacttcgtggaggcccag
gtcctgcagtccctcggggtcgactacatcgacgagtccgaggtcctcaccccggccgac
gaggtcaaccacagtgacaagttcgccttcaccacccccttcgtctgcggtgccaccaac
ctcggcgaggccctgcggcgcatcgccgagggcgcggcgatgatccgctccaagggcgag
gccggcaccggcaacgtcgtcgaggccgtccggcacctgcggcagatcaagagcgggatc
gcccggctgcgcggctgcgacaacaacgagctgtacgccgccgccaaggagctgcgcgcc
ccctacgagctggtcagggaggtctccgagctgggcaggctgccggtcgtgctgttctcc
gccggcggtgtcgccaccccggccgacgccgcgctgatgcgccagctcggcgccgagggc
gtcttcgtcggctccggcatcttcaagtccggcgacccggccaggcgcgccgccgccatc
gtgaaggcgaccaccttctacgacgacccgaagaccatcgcggacgcctcccgcgacctc
ggcgaggccatggtcggcatcaactgcgacaccctccccgagaccgagcgctacgccaac
cgcggctggtga
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