Streptomyces sp. VN1: EZV63_06420
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Entry
EZV63_06420 CDS
T10674
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
strv Streptomyces sp. VN1
Brite
KEGG Orthology (KO) [BR:
strv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
strv03051
]
EZV63_06420 (pafA)
Enzymes [BR:
strv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
EZV63_06420 (pafA)
Proteasome [BR:
strv03051
]
Prokaryotic proteasome
Bacterial regulatory particles
EZV63_06420 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
HTH_25
Motif
Other DBs
NCBI-ProteinID:
QIP69561
LinkDB
All DBs
Position
complement(1453183..1454544)
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNVTELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLLCGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDITGRRKVRLASGREASALEVQREYYEKAVDFVDRRGIRTGTV
ERVLELWGRTLEAIEEEDLDRIDTEIDWVMKYKLLERYRAKHNMTMSHPRVAQIDLAYHD
IHRRRGLYYLLEKKGQAARVANDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDDRVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacgtgcacgttcagggga
cagcgccgcctgtcgcctgacgaggtggcgcggtacctcttccgccgtgtcgtgtcatgg
ggccgcagcagcaatgtctttctgcgcaacggtgcccgcctgtatctcgacgtgggatcg
catccggagtacgcgacacccgaatgtgacaatgtgactgagctcgtcacccacgacaag
gcgggcgagcgcattctcgagggactcctggtggacgccgaacgacgcctgcacgaggag
gggatcgcgggcgacgtctacctcttcaagaacaacaccgactccgcgggcaactcgtac
ggctgccacgagaattatctggtggcgcggcacggggagttctcgcggctggcggacatc
ctgattccgttcctggtgacgaggcagttgctctgcggtgccggcaaggtgctgcagacg
ccgcgtggtgcggtgtactgcgtcagtcagcgggccgagcacatctgggagggcgtgtcg
tcggcgacgacgcgttcccggccgatcatcaacacgcgggacgagccgcacgcggacgcc
gagcgctatcggcggctgcacgtgatcgtgggcgactcgaacatgtcggagacgacgatg
ctgctcaaggtcggtgcgaccgacctggtgctgcgcatgatcgaggcgggcacggtgatg
cgggacctgacgctggagaacccgatccgggcgatccgcgaggtcagtcacgacatcacg
gggcggcgcaaggtgcgtctggccagtggccgggaggcgtccgcgctggaggtgcagcgg
gagtactacgagaaggccgtggacttcgtggaccgtcgcggcatccgcaccgggacggtg
gagcgggtgctggagctgtggggccgcacgctggaggcgatcgaggaggaggacctcgac
cggatcgacaccgagatcgactgggtcatgaagtacaagctgctcgagcggtaccgggcg
aagcacaacatgacgatgtcgcatccgcgggtcgcgcagatagacctcgcctaccacgac
atccaccgtcgtcgtggtctgtactacctgctggagaagaagggccaggcggcgcgggtc
gccaacgacttgaagatcttcgagggcaagtcggtgccgccgcagacgactcgggcccgt
ctgcggggtgacttcatccggcgggcgcaggagcagcggcgggacttcaccgtcgactgg
gtgcatctcaagctgaacgaccaggcgcagcgcaccgtgttgtgcaaggacccgttccgt
tcggtggacgaccgggtggagaagctgatcgccgggatgtga
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