Streptomyces sp. VN1: EZV63_21210
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Entry
EZV63_21210 CDS
T10674
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
strv Streptomyces sp. VN1
Pathway
strv03018
RNA degradation
Brite
Enzymes [BR:
strv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EZV63_21210 (recQ)
Messenger RNA biogenesis [BR:
strv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EZV63_21210 (recQ)
DNA repair and recombination proteins [BR:
strv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EZV63_21210 (recQ)
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SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QIP72043
LinkDB
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Position
4668665..4670632
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AA seq
655 aa
AA seq
DB search
MAETAQVGDGGSEALATLHRVFGYEAFRGEQEAVVDHVVAGGDAVVLMPTGGGKSLCYQI
PSLVRPGTGIVVSPLIALMQDQVDALRALGVRAGFMNSTQDFDERRVVEAEFLAGELDLL
YLAPERLRLEGTLDLLSRGKISLFAIDEAHCVSQWGHDFRPDYLALSLLGERWPDVPRLA
LTATATHATHREITERLNMPSARHFVASFDRPNIQYRIVSKTDPKKQLLSFLREEHPGDA
GIVYCLSRNSVEKTAEFLSRNGVEAVPYHAGLDAGTRAAHQSRFLREEGLVVVATIAFGM
GIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWMAYGLNDVIQQRKLIQSGEGD
EAFRRRAQSHLDAMLALCETVHCRRGQLLAYFGQEPDPAGCGNCDSCLTPPETWDGTVAA
QKVLSTVVRLKRERGQKFGAGQIIDILLGKRTAKVIQFDHDQLSVFGIGEELTETEWRGV
ARQLLAQGLLAVEGEYGTLVLTEASGTVLRREREVPLRKEPKKPATARSAGGGRGERKAK
AAAAELPAELAPAFEALRAWRAEQAREQGVPAYVIFHDATLREIATVWPTSVGQLGGISG
VGEKKLATYGEGVVAVLAGLEGPSAASTPAAGPGAGPAPHSGEDDWPEQEPEDWE
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcagagacagcgcaggtgggggacgggggcagcgaggcactggccacgctgcaccgg
gtcttcgggtacgaggcgttccgcggcgagcaggaagcggtcgtcgaccacgtggtggcc
ggcggcgacgccgtcgtactcatgccgaccggcggcggcaagtccctgtgctaccagatt
ccgtccctggtcaggcccggcacgggcatcgtggtctcgccgctgatcgcgctgatgcag
gaccaggtcgacgccctgcgggcgctcggcgtgcgcgccgggttcatgaactccacgcag
gacttcgacgagcggcgcgtggtggaggccgagttcctcgccggagagctggacctgctg
tacctggcgcccgagcggctgcgcctggagggcacgctcgacctgctctcgcgcggcaag
atctccctcttcgccatcgacgaggcgcactgcgtctcgcagtggggccacgacttccgg
cccgactacctcgccctgtcgctgctcggcgagcgctggccggacgtgccccgcctcgcg
ctcacggcgacggccacgcacgccacccaccgcgagatcaccgagcggctgaacatgccg
tcggcacggcacttcgtggccagcttcgaccggccgaacatccagtaccggatcgtgtcg
aagaccgaccccaagaagcagttgctgagcttcctgcgcgaggagcacccgggcgacgcg
ggcatcgtctactgcctctcgcgcaactcggtggagaagaccgccgagttcctctcgcgc
aacggcgtcgaggccgtcccgtaccacgcgggcctggacgcgggcacccgcgcggcacac
cagtcgaggttcctgcgcgaggagggcctggtcgtcgtggcgaccatcgccttcggcatg
ggcatcgacaagcccgacgtacgcttcgtcgcccacctcgacctgcccaagtccgtcgag
ggctactaccaggagaccggccgcgcgggccgggacggactgccctcgacggcctggatg
gcgtacggactcaacgacgtcatacagcagcgcaaactgatccagtccggcgagggcgac
gaggcgttccgccgccgggcccagtcccacctggacgccatgctggccctgtgcgagacc
gtccactgtcgccgcggccagctcctggcctacttcggacaggaaccggacccggccggc
tgcggcaactgcgactcctgcctgaccccgcccgagacctgggacggcacggtggcggcg
cagaaggtgctgtcgacggtggtgcggctgaagcgggagcgcggacagaagttcggcgcc
ggacagatcatcgacatcctgctcggcaagcgcaccgccaaggtcatccagttcgaccac
gaccagctctccgtgttcggcatcggcgaggaactgaccgagaccgagtggcgcggcgtc
gcccggcagctgctggcccagggactgctcgccgtcgagggggagtacggcacgctggtg
ctgaccgaggccagcgggacggtgctgcggcgcgagcgagaggtcccgctgcgcaaggag
cccaagaagcccgccacggccaggtcggcgggcggcggtcgcggcgagcgcaaggccaag
gcggcggcggccgagctgcccgcggaactggcccccgccttcgaggcgctgcgcgcctgg
cgtgcggaacaggctcgcgagcagggcgtccccgcgtacgtcatcttccacgacgccacc
ctccgggagatcgccaccgtgtggcccacctcggtcgggcagctcgggggcatcagcggg
gtgggcgagaagaagctggcgacgtacggggagggcgtggtggcggtgctggcgggactg
gaggggccgtccgccgcctcgacgcccgcggccggcccgggcgccgggcccgcgccccac
tccggcgaggacgactggcccgagcaggagcccgaggactgggagtag
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