Streptomyces sp. VN1: EZV63_24960
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Entry
EZV63_24960 CDS
T10674
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
strv Streptomyces sp. VN1
Pathway
strv00300
Lysine biosynthesis
strv00470
D-Amino acid metabolism
strv01100
Metabolic pathways
strv01110
Biosynthesis of secondary metabolites
strv01120
Microbial metabolism in diverse environments
strv01230
Biosynthesis of amino acids
Module
strv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
strv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EZV63_24960 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EZV63_24960 (lysA)
Enzymes [BR:
strv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
EZV63_24960 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QIP72687
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All DBs
Position
5488290..5489681
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AA seq
463 aa
AA seq
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MSRSAHPAGPRHADVLPEGHYTAPADDLNALDPKVWAHTVGRDADGVVTVGGIAVTQLAE
EYGTPAYILDEADFRDRARAWRTAFGTDADVFYAGKAFLSRAVVRWLDEEGLNLDVCSGG
ELATALSAGMPAERIAFHGNNKSPEEIERAVRAGVGRIVLDSFQEIVRVAHIAESLGKRQ
PVQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALRLDGLDVIGIHSHIGS
QIFDMSGFEVAAHRVVGLLKDVRDEHGVELAEIDLGGGLGIAYTSDDDPREPHEIAKALS
EIVTRECEGARLRTPRISVEPGRAIVGPTAFTLYEVGTVKPLEGLRTYVSVDGGMSDNIR
TALYDAEYSVALASRTSDAEPMLVRVVGKHCESGDIVVKDAFLPGDLAPGDLIAVPATGA
YCRSMASNYNHAMRPPVVAVRDGAARVIVRRETEEDLLRLDVG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttccgcacaccccgccgggccccggcacgccgatgtcctgcccgagggtcac
tacaccgccccggcggacgacctgaacgccctcgacccgaaggtctgggcccacaccgtc
gggcgggacgccgacggcgtcgtcaccgtgggcgggatcgccgtcacgcagctcgccgag
gagtacgggacgcccgcctacatcctcgacgaggccgacttccgggaccgtgcgcgggcc
tggcggaccgccttcgggaccgacgccgatgttttctatgcgggcaaggcgtttctgtcg
cgggccgttgtgcggtggctggatgaggaagggctcaacctggatgtgtgttccgggggt
gagctcgccaccgcgctgtccgcggggatgccggccgagcggatcgccttccacggcaac
aacaagtcgccggaggagatcgagcgcgccgtgcgggccggggtcgggcggatcgtgctc
gattccttccaggagatcgtgcgggtcgctcacatcgccgagtcgctgggcaagcggcag
cccgtgcagatcaggatcacggtcggggtcgaggcgcacacccatgagttcatcgccacc
gcgcacgaggaccagaagttcgggattccgctggccggcgggcaggccgccgaggccgtg
cggagggcgttgcggctcgacgggctcgacgtgatcgggatccactcgcacatcgggtcg
cagatcttcgacatgtccgggttcgaggtcgccgcgcaccgcgtggtggggctgctcaag
gacgtccgcgacgagcacggggtcgagctcgcagagatcgacctggggggcgggctcggg
atcgcctacaccagcgacgacgacccccgtgagccgcacgagatcgccaaggcgttgagc
gagatcgtgacgcgggagtgcgagggcgctcggctgcgtacgccgcggatcagtgtggag
ccggggcgggccatcgtcgggccgaccgcgttcacgttgtacgaggtggggaccgtgaag
ccgctggaggggctgcggacgtacgtctccgtggacggggggatgtccgacaacatccgg
accgcgctctacgacgccgagtacagcgtcgccctcgcctcccgcacctccgacgccgag
ccgatgctcgtgcgcgtcgtcggcaagcactgcgagagcggggacatcgtggtcaaggac
gccttcctgccgggtgacctggcaccgggggacctgatcgccgtaccggcgaccggggcc
tactgccgttccatggccagcaactacaaccacgcgatgcggccgcccgtcgtcgccgta
cgggacggtgcggcgcgcgtcatcgtgcgccgggagaccgaggaggatctgctccggctc
gatgtcggatga
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