Streptomyces sp. VN1: EZV63_25980
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Entry
EZV63_25980 CDS
T10674
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
strv Streptomyces sp. VN1
Brite
KEGG Orthology (KO) [BR:
strv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strv03032
]
EZV63_25980
03036 Chromosome and associated proteins [BR:
strv03036
]
EZV63_25980
03400 DNA repair and recombination proteins [BR:
strv03400
]
EZV63_25980
DNA replication proteins [BR:
strv03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EZV63_25980
Chromosome and associated proteins [BR:
strv03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
EZV63_25980
DNA repair and recombination proteins [BR:
strv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
EZV63_25980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Mitofilin
Motif
Other DBs
NCBI-ProteinID:
QIP72858
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All DBs
Position
5718012..5718674
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AA seq
220 aa
AA seq
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MNKAQLVEAIADKVGGRQQAADAVDAVLDALVRAVVAGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKNDIAVKKAPKGSLSGPPPTISKAA
GKKAAAKKATGAAKKATGAAKKTTGAAKKTTTAKKTTGAAKKTTAKKTTAKKSAAKTTTA
AAKKTAAKKAPAKKATAKKAPAKKSTARKTTAKKATARKK
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtgggcggccggcagcaggcc
gccgacgcggtcgacgcggtcctggacgccctcgtccgtgcggtggtcgcgggcgaccgg
gtctcggtcaccggcttcggttccttcgagaaggtcgaccgcccggcccggtacgcccgc
aacccccagacgggcgagcgggttcgggtcaagaagacctccgtgccgcgcttccgcgcg
ggccagggcttcaaggacctggtgagcggctcgaagaagctcccgaagaacgacatcgcg
gtcaagaaggcccccaagggcagcctgtccggcccgccgcccaccatctccaaggccgcg
ggcaagaaggccgccgccaagaaggccaccggcgccgcgaagaaggccaccggcgcggcc
aagaagacgaccggggcggcgaagaagaccaccaccgccaagaagaccacgggcgcggcg
aagaagaccacggcgaagaagaccaccgccaagaagtccgcagccaagaccaccacggcg
gcggcgaagaagaccgcggccaagaaggccccggcgaagaaggccaccgccaagaaggcc
ccggccaagaagtcgaccgcccgcaagaccaccgccaagaaggccaccgcccgcaagaag
tag
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