KEGG   Streptomyces sp. VN1: EZV63_25980
Entry
EZV63_25980       CDS       T10674                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
strv  Streptomyces sp. VN1
Brite
KEGG Orthology (KO) [BR:strv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:strv03032]
    EZV63_25980
   03036 Chromosome and associated proteins [BR:strv03036]
    EZV63_25980
   03400 DNA repair and recombination proteins [BR:strv03400]
    EZV63_25980
DNA replication proteins [BR:strv03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    EZV63_25980
Chromosome and associated proteins [BR:strv03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    EZV63_25980
DNA repair and recombination proteins [BR:strv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      EZV63_25980
SSDB
Motif
Pfam: Bac_DNA_binding HC2 Mitofilin
Other DBs
NCBI-ProteinID: QIP72858
LinkDB
Position
5718012..5718674
AA seq 220 aa
MNKAQLVEAIADKVGGRQQAADAVDAVLDALVRAVVAGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKNDIAVKKAPKGSLSGPPPTISKAA
GKKAAAKKATGAAKKATGAAKKTTGAAKKTTTAKKTTGAAKKTTAKKTTAKKSAAKTTTA
AAKKTAAKKAPAKKATAKKAPAKKSTARKTTAKKATARKK
NT seq 663 nt   +upstreamnt  +downstreamnt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtgggcggccggcagcaggcc
gccgacgcggtcgacgcggtcctggacgccctcgtccgtgcggtggtcgcgggcgaccgg
gtctcggtcaccggcttcggttccttcgagaaggtcgaccgcccggcccggtacgcccgc
aacccccagacgggcgagcgggttcgggtcaagaagacctccgtgccgcgcttccgcgcg
ggccagggcttcaaggacctggtgagcggctcgaagaagctcccgaagaacgacatcgcg
gtcaagaaggcccccaagggcagcctgtccggcccgccgcccaccatctccaaggccgcg
ggcaagaaggccgccgccaagaaggccaccggcgccgcgaagaaggccaccggcgcggcc
aagaagacgaccggggcggcgaagaagaccaccaccgccaagaagaccacgggcgcggcg
aagaagaccacggcgaagaagaccaccgccaagaagtccgcagccaagaccaccacggcg
gcggcgaagaagaccgcggccaagaaggccccggcgaagaaggccaccgccaagaaggcc
ccggccaagaagtcgaccgcccgcaagaccaccgccaagaaggccaccgcccgcaagaag
tag

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