Streptomyces sp. VN1: EZV63_26670
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Entry
EZV63_26670 CDS
T10674
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
strv Streptomyces sp. VN1
Pathway
strv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EZV63_26670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strv03019
]
EZV63_26670
03016 Transfer RNA biogenesis [BR:
strv03016
]
EZV63_26670
Enzymes [BR:
strv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EZV63_26670
Messenger RNA biogenesis [BR:
strv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EZV63_26670
Transfer RNA biogenesis [BR:
strv03016
]
Prokaryotic type
tRNA degradation factors
EZV63_26670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_PNO1_2nd
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QIP72983
LinkDB
All DBs
Position
5871076..5873295
Genome browser
AA seq
739 aa
AA seq
DB search
MENETHYAEAVIDNGAFGTRTIRFETGRLARQAAGSAVAYLDDDTMVLSATSASKNPKDQ
LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQV
VATIMALNPDHLYDVVAINAASASTQLAGLPFSGPIGGVRVALIRGQWVAFPTHTELEDA
VFDMVVAGRALEDGDVAIMMVEAEATDKTVKLVEGGAEAPTEEVVAAGLEAAKPFIKVLC
RAQADLAAKAAKPTGEFPIFLDYQDDVLEALTGAVKPELTQALTIAGKQDREAELDRVKG
LAAEKLLPEFEGREKEISAAYRSLTKSLVRERVIKEKKRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETGRVGSP
KRREIGHGALAERAIVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISQEISGETHYVALTDILGAEDAFGDMDFKVAGTKEFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMMEAIDTPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGADITIEDDGTIYIGAADGPAAEAARATINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLGVGQKVQVEIAEIDSRGKLSL
IPVIEGEEGTEEKKDDADQ
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgtcatcgacaacggcgccttcggcacccgc
accatccgcttcgagacgggccggctggccaggcaggccgccggttccgccgtggcgtac
ctggacgacgacaccatggtgctgtcggccaccagcgcctccaagaaccccaaggaccag
ctcgacttcttccccctcacggtggacgtcgaggagcggatgtacgccgccggcaagatc
cccggcagcttcttccgtcgcgagggccggccctccgaggacgcgatcctcacctgccgc
ctgatcgaccgcccgctgcgcccgtccttcaagaagggcctgcgcaacgagatccaggtc
gtcgcgacgatcatggccctcaaccccgaccacctgtacgacgtcgtggcgatcaacgcc
gcctccgcgtccacgcagctggccggcctgcccttctccggcccgatcggcggcgtccgc
gtcgcgctgatccgcggccagtgggtggccttcccgacgcacaccgagctcgaggacgcc
gtcttcgacatggtcgtcgcgggccgcgccctggaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgacaagaccgtcaagctcgtcgagggcggcgccgaggcgccc
accgaggaggtcgtcgccgccggtctggaggccgcgaagcccttcatcaaggtgctgtgc
cgcgcccaggccgacctcgccgcgaaggccgccaagccgaccggcgagttcccgatcttc
ctggactaccaggacgacgtcctcgaggcgctcaccggcgccgtcaagcccgagctgacc
caggcgctcaccatcgccggcaagcaggaccgcgaggccgagctggaccgcgtcaagggc
ctggccgccgagaagctcctgccggagttcgagggccgcgagaaggagatctccgccgcg
taccgctcgctgaccaagtccctggtccgtgagcgcgtcatcaaggagaagaagcgcatc
gacggccgcggtgtcactgacatccgcaccctggccgccgaggtcgaggccatcccgcgc
gtgcacggttccgcgctgttcgagcgtggcgagacccagatcctgggcgtcaccaccctg
aacatgctccgcatggagcagcagctggacaccctctccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactccgtcggcgagaccggccgcgtcggctccccg
aagcgccgcgagatcggccacggcgccctcgccgagcgcgccatcgtgccggtgctgccg
acgcgcgaggagttcccctacgcgatccgccaggtgtccgaggccctcggctccaacggc
tcgacgtccatgggctcggtctgcgcctccaccatgtcgctgctgaacgccggtgtgccg
ctgaaggcccccgtcgccggtatcgccatgggcctgatctcccaggagatcagcggcgag
acgcactacgtcgccctcaccgacatcctcggtgcggaggacgccttcggcgacatggac
ttcaaggtcgccggcaccaaggagttcgtgaccgccctccagctcgacaccaagctggac
ggcatccccgcctccgtcctggccgccgccctcaagcaggcccgtgacgcccgcctccac
atcctcgacgtgatgatggaagcgatcgacacgccggacgagatgtccccgaacgcgccg
cggatcatcaccgtgaagatcccggtcgataagatcggcgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacacgggcgccgacatcacgatcgaggacgacggc
accatctacatcggtgccgccgacggtccggccgccgaggccgcccgcgccacgatcaac
ggcatcgccaacccgaccatgcccgaggtcggcgagcgctacctggggacggtcgtcaag
acgaccaccttcggcgcgttcgtctccctgctgcccggcaaggacggtctgctgcacatc
tcgcagatccgcaagctcgcaggcggcaagcgcgtggagaacgtcgaggacgtcctcggt
gtgggccagaaggtccaggtcgagatcgccgagatcgactcccgcggcaagctctccctg
atccccgtgatcgagggcgaagagggcaccgaagagaagaaggacgacgccgaccagtga
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