Streptomyces sp. VN1: EZV63_26755
Help
Entry
EZV63_26755 CDS
T10674
Name
(GenBank) HAMP domain-containing protein
Organism
strv Streptomyces sp. VN1
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
ATG17_like
Baculo_PEP_C
DUF4795
RNase_Y_N
OKR_DC_1_N
ApoLp-III
ATG14
Motif
Other DBs
NCBI-ProteinID:
QIP72994
LinkDB
All DBs
Position
5891656..5897127
Genome browser
AA seq
1823 aa
AA seq
DB search
MESGAATRATKTRAKGGQSLSNKGKTRGGSTTVDTAALNRLLAALVSMREGNFRRRLTVS
GDGVMSEIAAVFNEVADRNLHLTGELARVRRTVGREGKLTERLETGACEGSWATAIDNSN
ALVDDLVRPVSEVSRVLSAVADGDLSPRMELRTQSEEGTGQPLRGEFLKVGRTVNNLVDQ
LSTFTDEVTRVASEVGTEGKLGGQARVRGMSGSWKDLTDSVNTMAYRLTAQVRDIALVTT
AVAKGDLSRKVTVHVAGEMLELKNTVNTMVDQLSAFSSEVTRVAREVGTEGALGGQAQVP
GVAGVWKELTDSVNTMAGNLTAQVREISHVTTAVANGDLSKKVTVPARGEVAQLAETINQ
MTETLRIFADEVTRVANETGGEGQLGGQANVPGAAGIWKDLTDSVNTVFRNLTTQVRDIA
AVTTAVASGDLSQKVTVDVAGEMLELKNTVNTMVDQLSAFGAEVTRVAREVGVEGELGGQ
AQVPGAAGTWKDLTDSVNTAFRNLTGQVRNIAQVTTAVANGDLSQKVTVDVSGEMLQLKN
TVNTMVDQLSSFADQVTRMARDVGTEGRLGGQARVDGVSGTWKELTDSVNSMAGNLTSQV
RNIAQVTTAVARGDLSQKIDVDARGEILELKNTINTMVDQLSSFAEQVTRVAREVGTEGR
LGGQAQVPGVAGVWRDLTDSVNGMAGNLTAQVRNIAQVATAVARGDLSQKITVDARGEIL
ELKNTLNTMVDQLSSFAQEVTRVAREVGTEGILGGQAEVQGVSGTWKDLTQSVNGMANNL
TMQVRNIAEVTTAVAKGDLSKKITVDAKGEILELVTTVNTMVDQLSSFAEQVTRMAREVG
TEGILGGQAHVPGVVGIWKDLSDNVNLMAKNLTVQVRNISQVAAAVANGDLTRTVTIEAR
GEVAQLADTFNTMVKTLSSFADQVTKVAREVGTDGILGGQAHVPGVSGTWKDLTESVNQM
ASNLTGQVRNIAMVTTAIAKGDLTKKIDIDARGEILELKTTINTMVDQLSSFAEEVTRVA
REVGTEGQLGGQARVRDVDGTWRDLTESVNEMAGNLTRQVRAIARVATAVTRGDLNLKID
VDASGEISELQDYINKMIANLRDTTIANKEQDWLKGNLARISGLMQGRRDLQDVASLIMS
ELTPVVSAQHGAFFLAMPLADGQEQAGADGDPYELRMLGSYGYSMGSMPTSFRPGEALVG
TAAQEKRTILVENAPSGYLKISSGLGEAPPAQVIVLPVLFEGQVLGVIELASFTPFTHIQ
KDFLNQIAEMIATSVNTISVNTKTEVLLSQSQELTEQLRERSAELEQRQKALQSSNAELE
EKAELLAQQNRDIEVKNTEIEEARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLNSLL
ILAKLLADNADANLSPKQVEFAETIHGAGSDLLQLINDILDLSKVDAGKMDVSPTRIALV
QLVDYVEATFRPLSAEKGLDLSVRVSPGLPATMHTDEQRLLQVLRNLLSNAVKFTDSGSV
ELVIRPARDEVPRRIREQLLEAGSTNDPDAELIAFSVSDTGIGIAASKMQVIFEAFKQAD
GTTSRKYGGTGLGLSISREIAQLLGGEIHAQSEPGRGSTFTLYLPLHPSELPPNGYPQAL
PSAEAGAPPVSAGVPELPPGTEDRGPAEATTYQDPHNGAAPLFRNRHRSPGAEELPAVRE
RQSADEQGTSPRSTRGIRFGGQKVLIVDDDIRNVFALTSVLEQHGLSVLYAENGREGIEV
LEQHEDVAVVLMDIMMPEMDGYATTTAIRRMPQFAGLPIIALTAKAMKGDREKAIESGAS
DYVTKPVDPDHLLTVMQQWMRAE
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctggcgcagcgacgcgggccacgaagacgcgcgcgaaaggcggacagtccctg
agtaataagggcaagacgcggggcggcagtacgacggtggacacggccgcgctgaaccgg
ctcctcgcagcgctcgtgtccatgcgggagggcaatttccgcaggcggctcacggtgtcc
ggcgacggcgtgatgtcggagatcgcggcggtcttcaacgaggtggccgaccgcaacctc
cacctcacgggtgagctggcgcgggtgcggcgcacggtcgggcgtgaggggaagctcacg
gaacggctggagacgggggcctgcgagggttcctgggcgaccgcgatcgacaactcgaac
gcgctggtggacgacctcgtgcggcccgtctccgaggtcagccgggtgctgtcggcggtg
gcggacggtgatctgtcgccccgcatggagctgcggactcagagcgaggagggcaccggg
cagccgctgcgtggtgagttcctgaaggtcggccggaccgtgaacaacctggtcgaccag
ttgtcgacgttcacggacgaggtcacgcgggtggccagcgaggtcggtaccgagggcaaa
ctgggcggtcaggcccgggtgcgcgggatgtcgggttcgtggaaggacctgacggactcc
gtcaacacgatggcgtaccggctcaccgcccaggtgcgggacatcgcgctggtgacgacg
gcggtggccaagggcgatctgtcccgcaaggtcaccgtgcacgtggccggcgagatgctg
gagctgaagaacaccgtcaacacgatggtggaccagctctcggcgttctcgtccgaggtg
acacgcgtcgcccgggaggtgggcaccgagggtgccctgggcggtcaggcgcaggtgccg
ggcgtggccggggtgtggaaggagctgaccgactccgtcaacaccatggccgggaacctg
acggcccaggtgcgggagatctcccatgtgacgacggcggtcgccaacggcgacctgtcg
aagaaggtgacggtgccggcccggggcgaggtcgcgcagctcgccgagacgatcaaccag
atgaccgagacgctgcggatcttcgcggacgaggtcacgcgcgtggcgaacgagacgggc
ggggagggccagctcggcgggcaggcgaacgtgccgggcgcggccggcatctggaaggac
ctgacggactccgtcaacaccgtcttccggaacctgaccacgcaggtgcgggacatcgcc
gcggtgacgaccgccgtggccagcggcgacctgtcgcagaaggtcacggtggacgtggcc
ggcgagatgctggagctgaagaacaccgtcaacacgatggtggaccagctgtccgccttc
ggtgccgaggtcacgcgggtggcccgggaggtcggtgtcgagggcgagctgggcggtcag
gcgcaggtgccgggggcggcggggacgtggaaggacctcacggactccgtcaacaccgcg
ttccgcaacctcaccggtcaggtgaggaacatcgcgcaggtgacgacggcggtggccaac
ggcgacctgtcgcagaaggtcacggtggacgtctccggcgagatgcttcagttgaagaac
accgtgaacacgatggtggaccagctctccagcttcgccgaccaggtgacgcggatggcc
cgggacgtgggcacggagggccgcctcggcggtcaggcccgggtcgacggcgtgtcgggg
acctggaaggagctgacggactccgtcaactccatggccggcaatctgacctcccaggtg
cgcaacatcgcccaggtgacgacggccgtcgcgcgcggcgacctgtcgcagaagatcgac
gtcgacgcgcgcggcgagatcctggagctgaagaacaccatcaacacgatggtggaccag
ctgtcgtccttcgccgagcaggtcacccgggtcgcccgcgaggtgggtacggagggccgc
ctcggcggtcaggcgcaggtgcccggcgtcgccggtgtgtggcgcgacctcaccgactcg
gtgaacggcatggccggcaacctcaccgcgcaggtgcgcaacatcgcgcaggtcgcgacg
gcggtggcgcgcggtgacctctcccagaagatcaccgtggacgcgcgcggcgagatcctg
gagctgaagaacaccctgaacacgatggtggaccagctgtcgtcgttcgcccaggaggtg
acgcgcgtcgcgcgcgaggtgggcaccgagggcatcctcggcggccaggccgaggtgcag
ggcgtctccggcacctggaaggacctcacgcagtccgtgaacggcatggccaacaacctg
accatgcaggtccgcaacatcgccgaggtcaccaccgcggtggccaagggcgacctgtcg
aagaagatcaccgtcgacgccaagggcgagatcctcgaactggtcaccaccgtcaacacg
atggtggaccagctgtcgtccttcgccgagcaggtcacgcggatggcccgcgaggtgggc
acggaaggcatcctgggcggccaggcgcacgtgcccggcgtcgtcggcatctggaaggac
ctcagcgacaacgtcaacctgatggcgaagaacctcaccgtgcaggtgcgcaacatctcc
caggtggccgccgccgtcgccaacggcgacctgacgcgtacggtgacgatcgaggcgcgc
ggcgaggtcgcgcagctcgccgacacgttcaacaccatggtgaagacgctgagttccttc
gcggaccaggtcaccaaggtggcccgcgaggtgggcacggacggcatcctgggcggtcag
gcgcacgtgccgggcgtgtcgggcacctggaaggacctcaccgagtcggtgaaccagatg
gcgtccaacctgaccggtcaggtgcgcaacatcgccatggtcacgacggcgatcgccaag
ggcgacctgaccaagaagatcgacatcgacgcgcggggcgagatcctggagctgaagacg
accatcaacacgatggtcgaccagctgtcgtcgttcgccgaggaggtcacccgcgtggcc
cgcgaggtgggcaccgaggggcagctgggcggtcaggcgcgggtgcgggacgtggacggc
acctggcgcgacctgacggagtccgtgaacgagatggccgggaacctgacccggcaggtg
cgtgccatcgcgcgcgtggcgaccgcggtgacgcgcggagacctgaacctcaagatcgac
gtggacgcctcgggcgagatctccgagctgcaggactacatcaacaagatgatcgccaac
ctgcgcgacaccacgatcgccaacaaggagcaggactggctcaagggcaacctcgcccgg
atctccggcctgatgcagggccgccgcgacctccaggacgtggcctcgctgatcatgagc
gagctgacgccggtggtctcggcgcagcacggggcgttcttcctcgcgatgccgctggcc
gacggccaggagcaggccggtgccgacggtgacccgtacgagctgcggatgctcgggtcg
tacggctactcgatggggtccatgccgacctcgttccggccgggggaggcgctggtcggc
acggccgcccaggagaagcgcaccatcctggtggagaacgcgccgagcggctacctgaag
atctcctccgggctcggggaggcgccgcccgcccaggtcatcgtcctgccggtgctgttc
gaggggcaggtgctcggcgtcatcgagctggcgtccttcacgccgttcacgcacatccag
aaggacttcctcaaccagatcgccgagatgatcgcgaccagcgtcaacaccatctccgtc
aacaccaagaccgaggtgctgctgagccagtcgcaggagctgaccgagcagctgcgggag
cggtccgccgagttggagcagcggcagaaggcgctccagtcctccaacgccgagctggag
gagaaggccgagctgctggcgcagcagaaccgcgacatcgaggtgaagaacaccgagatc
gaggaggcgcggcaggtcctggaggagcgcgccgagcaactcgcggtctcgatgcgctac
aagagcgagttcctggccaacatgtcgcacgagctgcgtacgccgctcaactcgctgctg
atcctggccaagctcctcgccgacaacgccgacgcgaacctctccccgaagcaggtcgag
ttcgccgagacgatccacggagccggttccgacctgctccagctcatcaacgacatcctc
gacctgtcgaaggtcgacgccgggaagatggacgtctccccgacgcgcatcgcactcgtc
cagctcgtggactacgtggaggccaccttccggccgctgagcgcggagaagggcctggac
ctgtcggtgcgggtgtcgccggggctgcccgcgaccatgcacaccgacgagcagcggctg
ctccaggtgctgcgcaacctgctgtccaacgcggtgaagttcaccgactcgggctcggtc
gagctggtcatcaggccggcccgggacgaggttccgcggcgcatccgggagcagttgctg
gaggccggttcgacgaacgacccggacgccgagctgatcgcgttctccgtgagcgacacg
ggcatcgggatcgcggccagcaagatgcaggtgatcttcgaggcgttcaagcaggccgac
ggcaccaccagccgcaagtacggcggtacgggcctcgggctgtccatctcgcgggagatc
gcgcagctgctgggcggcgagatccacgcgcagagcgaaccgggccgcggctccaccttc
acgctctacctcccgctgcacccgagcgagctgcctcccaacggctacccgcaggccctg
ccctccgccgaggccggcgcgcctccggtgtctgccggggtcccggagctgccgccgggc
acggaggaccgggggccggccgaggcgaccacgtaccaggacccgcacaacggtgccgcc
ccgctgttccggaaccgccaccggtcgcccggggccgaggagctgcccgcggtgcgcgag
cggcagtcggccgacgagcagggaacgtcgccgcggtcgacccggggcatcaggttcggc
gggcagaaggtgctgatcgtcgacgacgacatccgcaacgtcttcgcgctcaccagcgtg
ctggaacagcacgggctgtccgtcctgtacgccgagaacgggcgcgagggcatcgaggtc
ctggagcagcacgaggacgtggcggtcgtcctgatggacatcatgatgcccgagatggac
gggtacgcgacgaccacggcgatccgccggatgccgcagttcgccgggctgccgatcatc
gcgctgaccgcgaaggcgatgaagggcgaccgggagaaggcgatcgagtcgggcgcgtcc
gactacgtcacgaagccggtagaccccgaccacctgctgacggtgatgcagcagtggatg
cgggcggagtga
DBGET
integrated database retrieval system
