Streptomyces sp. VN1: EZV63_27875
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Entry
EZV63_27875 CDS
T10674
Name
(GenBank) Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
strv Streptomyces sp. VN1
Brite
KEGG Orthology (KO) [BR:
strv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
strv03000
]
EZV63_27875
Transcription factors [BR:
strv03000
]
Prokaryotic type
Helix-turn-helix
Other families
EZV63_27875
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_14
HTH_8
HTH_50
AAA_16
Sigma54_activat
AAA
Sigma54_activ_2
HTH_30
AAA_22
HTH_7
HTH_11
AAA_5
HTH_22
DUF815
AAA_30
HTH_17
TsaE
AAA_29
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QIP73192
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Position
6197550..6199358
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AA seq
602 aa
AA seq
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MLSDSTARDRNIARARLKFLENAELPAAIVPEGILNSWQRSKYLGIGTDEVVVPYQPDYD
RESRLVRAATPVLDRLEQALTGSDASVIVTDRNGWVRDRRVGEKRLSAHLDRVHLAPGFN
YAEQFVGTNGIGVALEERRPNVVLGTEHFNERLQGVSCAAAPIRNSVTGRVEGAMNLTCW
NGPARPLMAALVQEAVEDIERVMYEFSSAHQRALLEAFQQVTHYGDRPVLCLGQDLVLAN
TAASARLTGDDHRLLHEAAAEFGHAPRTRREVRLTGGQHAVMRCRQVDSPAGAAGYLLEL
AFTDHPADRPDPRTRPGTRTEAGAAVGPWPLPGLVGTDPAWNAVSRTVSRCARARTPLLL
HGEPGTGKATLVRAAHALTGAASAPVVVDAAAPAAADAGHDLPAALRAAPAGPGRVLVLR
NVDAVPPEDEAAVAGALEAATAQGTWLVGTLQGALGVPEALRNRFLEVAEVPALRHRLAD
LPALVDCLLRRIGPGVECAPEAVAPLRRHDWPGNVRELSLVLSRAAAARRTYRIELGDLP
PSLHSAGSRSLSVWEASERDTLVQALLEADGNKLLAAQRLGISRTTIYRKMRAYGITLPA
RG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgctcagtgacagcacagcgcgcgaccgaaacatcgcgcgagcacgcctgaagttcctg
gagaacgcggaactgcctgcggcgattgtgcccgagggcatcctcaactcctggcagcgt
tccaagtacctggggatcggcacggacgaggtggtcgtcccctaccagccggactacgac
cgggagagccgcctggtacgcgccgccacgccggtcctggaccggctggaacaggcgctg
acgggttcggacgccagcgtgatcgtgacggaccgcaacggctgggtgcgggaccgccgc
gtcggggagaagcggctctcggcgcacctggaccgggtccacctggcgcccggcttcaac
tacgcggaacagttcgtcggcacgaacggcatcggcgtcgcgctggaggagcgccggccc
aacgtggtgctgggcaccgagcacttcaacgaacgcctgcagggcgtctcctgcgccgcc
gccccgatccgcaactcggtcaccggacgggtcgagggggccatgaacctgacctgctgg
aacggcccggctcgccccctcatggcagccctcgtgcaggaagccgtcgaggacatcgag
cgcgtgatgtacgagttcagcagcgcccaccagcgcgctctcctggaggcgttccagcag
gtcacccactacggcgaccggccggtgctctgcctcggccaggatctcgtgctcgccaac
accgccgcctcggcgcggctcaccggcgacgaccaccggctgctgcacgaggccgccgcc
gagttcgggcacgcgccccgcacccgcagggaggtacgcctgaccggcgggcagcacgcc
gtgatgcgctgccggcaggtcgacagcccggcgggcgcggccggatacctgctggagctg
gccttcacggaccacccggccgaccggcccgacccccgtacgaggccgggtacccgcacg
gaggcgggcgcggccgtgggcccctggccgctgcccggcctggtcggcacggacccggcc
tggaacgcggtctcccgcaccgtctcgcgctgcgcccgcgcccgcaccccgctgctgctc
cacggcgagcccggcaccggcaaggcgaccctggtccgcgccgcgcacgcgctgaccggt
gcggcctcggcccccgtcgtcgtggacgccgccgcccccgcggccgcggacgccgggcac
gacctgccggccgccctgcgcgcggcgcccgccggaccgggccgcgtcctggtcctgcgc
aacgtcgacgcggtaccgcccgaggacgaggccgccgtcgccggggcactggaggccgcg
acggcgcagggcacctggctcgtcggcacactgcagggcgcactcggcgtgccggaggcg
ctgcgcaaccgcttcctcgaagtggcggaggtacccgccctgcggcaccggctcgcggac
ctcccggccctggtcgactgcctgctgcggcgcatcggccccggcgtggagtgcgccccg
gaggccgtggcgccgctgcgccggcacgactggcccggcaacgtccgcgaactgagcctc
gtcctgagccgggccgccgcggcccgccgcacgtaccggatcgaactcggcgacctgccg
ccgtccctgcacagcgcgggcagccggtccctgagcgtgtgggaggcgtccgagcgcgac
accctggtccaggcgctcctggaggccgacggcaacaagctgctcgcggcccagcggctc
ggcatctcccggacgacgatctaccgcaagatgcgggcctacggcatcaccctccccgcc
cggggctga
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