Streptomyces sp. WP-1: QHG49_07230
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Entry
QHG49_07230 CDS
T10379
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
strw Streptomyces sp. WP-1
Pathway
strw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
strw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QHG49_07230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strw03400
]
QHG49_07230
Enzymes [BR:
strw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
QHG49_07230
DNA repair and recombination proteins [BR:
strw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
QHG49_07230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
WKE68826
LinkDB
All DBs
Position
complement(1705476..1706255)
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AA seq
259 aa
AA seq
DB search
MRIATWNVNSITARLPRLLAWLESSGTDVLCLQEAKVAEEQFPVEPLRELGYEAAVHATG
RWNGVAVLSRVGLADVVKGLPGDPGYEGVTEPRAISATCGPVRVWSVYVPNGREIDHPHY
AYKLQWFEALRAAVLGDAQGSRPFAVLGDYNVAPTDDDVYDRAAFEGATHVTPAERAALT
ALREAGLDDVVPRPLKYDHPFTYWDYRQLCFPKNRGMRIDLVYGNAAFAGAVKDAYVDRE
ERKGKGASDHAPVVVDLDV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgcgacctggaacgtgaactcgatcaccgcccgcctcccgcgcctgctggcc
tggctggagagcagcggcaccgacgtgctctgcctccaggaggccaaggtcgccgaggag
cagttcccggtcgagccgctgcgcgagctgggctacgaggccgcggtgcacgccaccggc
cggtggaacggcgtggcggtgctctcccgcgtcggcctggccgacgtcgtcaagggactg
cccggcgaccccggctacgagggcgtgaccgagccccgcgccatctccgccacctgcggc
cccgtccgcgtctggtcggtgtacgtgcccaacggccgcgagatcgaccacccgcactac
gcgtacaagctccagtggttcgaggccctgcgcgccgccgtcctcggcgacgcccagggc
agccggcccttcgccgtcctcggtgattacaacgtggcgccgaccgacgacgacgtctac
gaccgggccgccttcgagggcgccacccacgtcacccccgccgagcgcgccgccctcacc
gccctgcgcgaggccggcctcgacgatgtcgtaccgcgcccgctcaagtacgaccacccg
ttcacctactgggactaccgccagctctgcttccccaagaaccgcggcatgcgtatcgac
ctggtgtacggcaacgcggccttcgcgggcgccgtcaaggacgcctacgtcgaccgcgag
gagcgcaagggcaagggcgcctccgatcacgcgcccgtggtggtcgacctcgacgtgtga
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