Streptomyces sp. WP-1: QHG49_10545
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Entry
QHG49_10545 CDS
T10379
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
strw Streptomyces sp. WP-1
Pathway
strw02020
Two-component system
strw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
strw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QHG49_10545 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QHG49_10545 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strw03021
]
QHG49_10545 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
strw02035
]
QHG49_10545 (whiG)
Transcription machinery [BR:
strw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QHG49_10545 (whiG)
Bacterial motility proteins [BR:
strw02035
]
Flagellar system
Flagellar assembly proteins
Stator
QHG49_10545 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_31
UPF0122
Motif
Other DBs
NCBI-ProteinID:
WKE69443
LinkDB
All DBs
Position
complement(2512867..2513709)
Genome browser
AA seq
280 aa
AA seq
DB search
MPQHTSGSDRAAIPPAARDGGSVRPPAPSTLDELWRSYKATGDERLREQLILHYSPLVKY
VAGRVSVGLPPNVEQADFVSSGVFGLIDAIEKFDIDREIKFETYAITRIRGAMIDELRAL
DWIPRSVRQKARNVERAYATLEARLRRTPSESEVAGELGMEVDELHAVFSQLSLANVVAL
EELLHVGGEGGDRLSLMDTLEDTAADNPVEVAEDRELRRFLARAINTLPDREKTVVTLYY
YEGLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLASFGR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtccgaccgggcggcgatccccccagccgcccgcgacggt
ggcagcgtgcggccgcccgctccctcgacgctcgacgagctgtggcggtcgtacaaggcg
acgggggacgaacggctgcgggagcagctgatcctgcactactcgccgctcgtgaaatac
gtggcgggccgggtgagcgtcggcctgccgcccaacgtggagcaggccgacttcgtctcc
tccggggtgttcgggctgatcgacgcgatcgagaagttcgacatcgaccgggagatcaag
ttcgagacgtacgcgatcacccggatccgcggtgccatgatcgacgagctgcgggcgctg
gactggatcccgcgctcggtgcggcagaaggcgcgcaatgtcgagcgcgcctacgccacc
ctggaggcccggctgcggcgcaccccgagcgagagcgaggtggccggggagctgggcatg
gaggtggacgaactgcacgccgtcttcagccagttgtcgctcgccaacgtggtcgccctg
gaggagctgctgcacgtcggcggcgagggcggggaccggctcagcctcatggacacgctg
gaggacaccgccgcggacaaccccgtggaggtggccgaggaccgggagctgcgaagattc
ctcgcgcgggccatcaacacactgcccgaccgggagaagacggtcgtcacgctctactac
tacgagggcctcacgctggccgagatcggcaatgtcctcggggtcaccgagagccgggtc
agccagatccacaccaagtcggtccttcagctgcgggccaagctggcgagcttcggacgc
tga
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