Streptomyces sp. WP-1: QHG49_12675
Help
Entry
QHG49_12675 CDS
T10379
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
strw Streptomyces sp. WP-1
Pathway
strw03420
Nucleotide excision repair
strw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
strw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QHG49_12675
03430 Mismatch repair
QHG49_12675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strw03400
]
QHG49_12675
Enzymes [BR:
strw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QHG49_12675
DNA repair and recombination proteins [BR:
strw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QHG49_12675
MMR (mismatch excision repair)
Other MMR factors
QHG49_12675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WKE69834
LinkDB
All DBs
Position
complement(2979282..2982791)
Genome browser
AA seq
1169 aa
AA seq
DB search
MPAHLTDPEQLKELLGIPFTTEQTACITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALVRAGVTDPDAIDPDNPPGEPVISTYHSFAGRLL
TDHGLRIGLEPASRLLADATRYQLAARVLREAPGPYPALTRSFADLVGDLLALDAELSEH
LVEPGELRAWDAELLTTLQDARLSNAELRKVPETAAARRELAGLVQRYRAAKRERDLLDF
GDQIALSARLATLPEVGRLLREEFRVVLLDEYQDTSVAQRVLLSGLFGAGTGHPVTAVGD
PCQAIYGWRGASVANLDDFPDHFRHADKTPATRQALSENRRSGGRLLDLANGLAAPLRAL
HAGVEALRPAPGAERDGLVRCALLPTHAEELDWLADSVAHLVRTGTPPGEIAVLCRTAAD
FAALQGALVAREVPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANAGLVRLLTGPRWRIG
PRDLALLGRRARLLVAHAGAGDTDDPDRRLAAAVEGTDPAEVISLADALDTFLDARGGDE
DGLPFSPDARVRFARLATELRDLRRALSDPLMDVLHRVLAVTGLEVELSASPGALAARRR
ETLANFLDVAAAFAAGDGEATLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTAHRSKG
LEWDVVAVPGLVTGTFPSAQGRDKWTAQAKVLPHALRGDAATLPDVDGWDARGMKAFHEA
MKEHQHTEELRLGYVTFTRPRSLLLGSGHWWGPSQKKKRGPSDFLRELYEHCAAGYGEIE
VWAEEPADDEENPALRESEADLAWPLPLDAGALARRRAAAETVLAHLDTLPGTGPAPADP
AAYEDPDWPAPPEEPPYDEPYDEPYDEPPYDEADDEPPYEDPYDAGPDPEPHGDEPCGGA
PHAGGAPAIPHQAPAPAEPGPHPSLTPEESRLTASWDRDLDALAGELLLARRAVTDVPLP
PTLTATQLLRLAEDPDGLAQELARPMPRPPQRAARRGTRFHAWVESRYEELALPLLEPDE
LPGADAEIADEQDLEALKEAFERTEYARRTPYRVEEPVQLVLAGRVVRGRIDAVYRKGEG
ASATYEIVDWKTGREHTADPLQLAVYRLAWAEQQGVPLDAVTATFLYVRTGEAVRPRDLP
GRAALERLLTGGPGAADGAGDVIQRAPRV
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccatctcaccgatcccgagcagctcaaggagctcctcggcatccccttcacc
acggagcagacggcctgcatcaccgcgccgcccgccccgcaggtgatcgtggccggtgcc
ggttcgggcaagacgaccgtgatggcggcccgcgtggtctggctggtcggcaccggacag
gtcgcccccgagcaggtcctcgggctgaccttcaccaacaaggccgcgggcgaactggcc
gaacgcgtccgcaaggccctcgtcagggccggcgtcaccgaccccgacgcgatcgacccg
gacaaccccccgggcgagccggtcatctccacctaccactccttcgccggccgcctcctc
accgaccacggcctgcgcatcggcctggagcccgcctcccgcctcctcgccgacgccacc
cgctaccagctcgccgcccgtgtgctgcgcgaggcccccggcccctacccggcgctcacc
cggtccttcgccgacctggtcggcgacctgctcgccctggacgccgaactctccgaacac
ctggtggaacccggcgaactgcgcgcctgggacgccgagttgctgaccaccctccaggac
gccagactcagcaacgccgaactgcgcaaggtccccgagaccgccgccgcccgccgcgaa
ctcgccggactggtccagcgctaccgggccgccaaacgcgaacgcgacctgctcgacttc
ggcgaccagatcgccctgtccgcccgcctcgcgacgctgcccgaggtgggccgcctgctg
cgcgaggagttccgggtggtcctcctggacgagtaccaggacacctccgtcgcccaacgc
gtcctgctctcgggcctgttcggcgccggcaccggccacccggtgaccgccgtgggcgac
ccctgccaggccatctacggctggcgcggcgcctccgtcgccaacctggacgacttcccc
gaccacttccgccacgccgacaaaacccccgccacccgccaggccctcagcgagaaccgc
cgcagcggcggccgcctcctcgacctcgccaacggactcgccgcccccctgcgcgccctg
cacgcgggcgtcgaggccctgcgcccggcccccggcgccgagcgcgacggcctggtccgc
tgcgccctgctgcccacccacgccgaggaactggactggctcgccgactccgtcgcccac
ctcgtgcgcaccggcaccccgcccggcgagatcgccgtcctgtgccgtacggccgccgac
ttcgccgccctccagggcgcgctggtcgcccgggaggtcccggtcgaggtggtcggcctg
tccgggctgctgcacctgcccgaggtcgcagacctggtcgccgtctgcgaggtcctccag
gaccccggcgccaacgccggcctggtacggctgctgaccggcccccgctggcgcatcggc
ccccgtgacctcgccctgctcggccgccgcgcccggctgctggtcgcccacgcgggcgcc
ggtgacaccgacgacccggaccgccgcctcgccgccgccgtggagggcaccgacccggcc
gaggtgatatcgctcgccgacgccctggacaccttcctggacgcccgcggcggggacgag
gacgggctgccgttctccccggacgcccgcgtgcgcttcgcccgcctcgccaccgaactg
cgcgatctgcgccgcgcgttgtccgacccgctgatggacgtcctgcaccgcgtcctcgcc
gtcaccggcctggaggtggagctgtcggcgtccccgggcgccctggccgcccgccgccgc
gagaccctcgccaacttcctcgacgtcgccgccgccttcgccgcgggcgacggcgaggcc
accctgctcgccttcctgggcttcctgcgcaccgccgcccagtacgagaagggcctcgac
aacgccctgcccggcggcgagaacaccgtcaaggtgctcaccgcgcaccggtccaagggc
ctggaatgggacgtcgtggccgtgcccggcctggtcaccggcaccttccccagcgcccag
ggccgcgacaagtggaccgcgcaggccaaggtgctgccgcacgcgctgcgcggcgacgcc
gccaccctgcccgacgtggacggctgggacgcgcgcggcatgaaggcgttccacgaggcc
atgaaggagcaccagcacaccgaggaactccgcctcggctacgtcaccttcacccgcccc
cgctccctcctgctcggctccggccactggtggggccccagccagaagaagaagcgcggc
ccctccgacttcctccgggagctgtacgaacactgcgccgccgggtacggcgagatcgag
gtctgggccgaggagcccgccgacgacgaggagaacccggccctgcgggagtccgaggcc
gacctggcctggccgctgcccctggacgccggcgccctcgcccgccgccgcgccgccgcc
gagacggtcctcgcccacctcgacaccctgcccggcaccggcccggcccccgccgacccc
gccgcctacgaggacccggactggccggcacccccggaggaaccgccgtacgacgagccg
tacgacgagccgtacgacgagccgccgtacgacgaggccgacgacgagccgccgtacgaa
gacccgtacgacgccgggccggaccccgagccgcacggcgacgagccctgcggcggcgcc
ccgcacgccggcggcgcccccgccatcccccaccaggcccccgcccccgccgagccgggc
cctcacccctccctcacccccgaggagtcccgcctgaccgcctcctgggaccgcgatctg
gacgccctcgccggggaactgctgctcgcccgccgcgccgtcacggacgtacccctgccc
ccgacgctcaccgccacccagctgctgcggctggccgaggacccggacgggctcgcgcag
gaactcgcgcgccccatgccgcgccccccgcagcgggccgcacgccggggcacccgcttc
cacgcctgggtggagtcgcgctacgaggagctggcgctgcccctgctggagcccgacgag
ctgcccggcgccgacgccgagatcgccgacgaacaggacctggaagcgctcaaggaagcc
ttcgagcgcaccgagtacgcccggcgcacgccgtaccgcgtggaggagccggtccagctc
gtcctcgccgggcgggtcgtacgcggccggatcgacgccgtctaccggaagggcgagggc
gcgtcggcgacgtacgagatcgtggactggaagaccggccgggagcacaccgccgacccg
ctccagctcgccgtgtaccggctggcctgggccgaacagcagggcgtcccgctcgacgcg
gtcaccgccacgttcctgtacgtgcgcaccggggaggccgtacgcccccgggacctgccc
ggccgtgccgcgctggaacggctgctcaccggcgggcccggggcagcggacggggcgggc
gacgtgatccagcgcgccccccgagtgtga
DBGET
integrated database retrieval system