Streptomyces sp. WP-1: QHG49_14200
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Entry
QHG49_14200 CDS
T10379
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
strw Streptomyces sp. WP-1
Pathway
strw03420
Nucleotide excision repair
strw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
strw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QHG49_14200 (pcrA)
03430 Mismatch repair
QHG49_14200 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strw03400
]
QHG49_14200 (pcrA)
Enzymes [BR:
strw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QHG49_14200 (pcrA)
DNA repair and recombination proteins [BR:
strw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QHG49_14200 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
QHG49_14200 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
WKE70112
LinkDB
All DBs
Position
complement(3320096..3322600)
Genome browser
AA seq
834 aa
AA seq
DB search
MSSLFDDSFLADLQAPRGHEEEHAPPPEDDHTPEPIPEDLFGGKFDVPPDRDTHYRDGAP
RPPLDAAALLEGLNENQRAAVAHAGSPLLIVAGAGSGKTRVLTHRIAHLLAERHVHPGQI
LAITFTNKAAGEMKERVEQLVGLRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQAADGFEKTLAQAYAL
YQSRLREANALDFDDLIMTTVHLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVREL
VGTGAHDTDVPPGEQDLPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPNATTILLEQ
NYRSTQTILSAANAVIERNESRRPKNLWTNAGQGARITGYVADTEHDEAQFVADEIDRLT
DAGEARAGDVAVFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLAN
PEDSVPLRRILNVPKRGIGERAEAMIDALAQREKISFPQALKRVDEAYGMAARSTNAVKR
FNTLMEDLRTIVESGAGPATVLEAILERTGYLAELQNSTDPQDETRIENLQELAAVALEF
EQERGEGEAAPDAPAAGGTLADFLEQVALVADSDQIPDEEDGDGVITLMTLHTAKGLEFP
VVFLTGMEDGVFPHMRALGQVKELEEERRLAYVGITRARERLYLTRAAMRSAWGQPSYNP
PSRFLEEIPATHVDWKRTGATAPLSSGPASGVAASLSSSRSRSSASGASGFATRRTAEKP
VVGLSVGDRVTHDQFGLGTVVGVKGTGANAEATIDFGDTKPKRLLLRYAPVEKL
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcggatctccaggccccgcgtgggcacgag
gaggaacatgcgccgccccccgaggacgatcacactccggagccgattccggaggatctg
ttcggcgggaagttcgacgtgccgccggaccgggacacccactaccgcgacggcgccccg
cgccccccgctggacgcggcggccctgctggaggggctgaacgagaaccagcgcgccgcc
gtcgcgcacgccggttccccgctgctcatcgtggccggcgccggttccggcaagacccgt
gtgctcacccaccggatcgcccacctgctcgccgagcgccatgtgcacccggggcagatc
ctcgcgatcaccttcaccaacaaggccgcgggcgagatgaaggagcgtgtcgagcagctc
gtcggcctgcgggccaacgccatgtgggtgatgaccttccacagcgcgtgcgtgcgcatc
ctgcgccgggagagcaagaagctcggcttcacgtcgtcgttctcgatctacgacgccgcc
gacagcaagcgcctgatggccctggtctgccgcgacctggacctcgaccccaagcgcttc
ccgcccaagtccttcagcgccaagatcagcaatctgaagaacgagctgatcgacgaggag
gacttcgcggcccaggcagccgacggtttcgagaagaccctggcccaggcgtacgcgctc
taccagtcgcggctgcgcgaggccaacgcgctcgacttcgacgacctgatcatgacgacg
gtccatctgctgcgcgccttcccggacgtcgccgagcactaccgccgccgcttccggcat
gtcctggtcgacgagtaccaggacaccaaccacgcccagtacgcgctggtccgcgagctg
gtcggcaccggcgcgcacgacacggacgtaccgcccggcgagcaggacctcccgcccgcc
gaactgtgcgtcgtgggtgacgcggaccagtcgatctacgccttccgcggcgcgaccatc
cgcaacatcctccagttcgaggaggactacccgaacgcgacgacgatcctgctggagcag
aactaccgctccacgcagaccatcctgtccgccgccaacgcggtcatcgagcgcaacgag
tcccgccgcccgaagaacctgtggaccaacgccggacagggcgcgcggatcaccggctat
gtcgccgacaccgagcacgacgaggcccagttcgtcgccgacgagatagaccgcctcacg
gacgcgggcgaggcgcgcgccggtgacgtcgccgtcttctaccggaccaacgcccagtcc
cgtgtcttcgaagagatcttcatccgcgtcggtctgccctacaaggtcgtcggcggggtc
cgcttctacgagcgcaaggaggtccgggacgtcctcgcctacctgcgcgttctcgccaac
cccgaggactcggtgccgctgcgccgcatcctcaacgtgcccaagcggggcatcggcgag
cgcgccgaggcgatgatcgacgccctcgcccagcgcgagaagatcagcttcccgcaggcg
ctcaagcgggtggacgaggcgtacggcatggccgcgcgctccaccaacgcggtcaagcgc
ttcaacacgctgatggaggacctgcgcaccatcgtggagtccggcgccggaccggccacg
gtcctggaggccatactcgaacgcaccggctatctcgccgagttgcagaactccaccgac
ccgcaggacgagacccgcatcgagaacctccaggaactcgccgccgtcgccctggagttc
gaacaggagcgcggcgagggcgaggcggcaccggacgcccccgcggcgggcggcacactg
gccgacttcctggagcaggtcgccctggtcgccgactccgaccagatccccgacgaggag
gacggcgacggcgtcatcaccctgatgaccctgcacaccgccaagggcctggagttcccg
gtcgtcttcctgaccggcatggaggacggcgtcttcccgcacatgcgcgccctcgggcag
gtcaaggagctggaggaggagcggcgcctggcgtacgtgggcatcacccgcgcgcgggag
cggctgtacctcacgcgggccgcgatgcgcagcgcctgggggcagccgtcgtacaacccg
ccctcccgcttcctggaggagatcccggccacccatgtggactggaagcgcacgggggcg
acggcgccgctgtcctccgggcccgcgtccggggtggcggcctcgctgtcctcctcgcgt
tcgcgttcctcggcctcgggcgcgtccggcttcgccacgcggcgcaccgcggagaagccg
gtggtcgggctgtccgtcggggaccgggtcacccacgaccagttcggtctcggcacggtc
gtcggagtcaagggcacgggcgcgaacgcggaggcgacgatcgacttcggcgacaccaag
ccgaagcggctgctgctgcggtacgcgccggtggagaagctgtag
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