Streptomyces sp. WP-1: QHG49_15535
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Entry
QHG49_15535 CDS
T10379
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
strw Streptomyces sp. WP-1
Brite
KEGG Orthology (KO) [BR:
strw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
strw03016
]
QHG49_15535
Enzymes [BR:
strw01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
QHG49_15535
Transfer RNA biogenesis [BR:
strw03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
QHG49_15535
Prokaryotic type
tRNA splicing ligases
QHG49_15535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WKE70353
LinkDB
All DBs
Position
complement(3580743..3581936)
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AA seq
397 aa
AA seq
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MSYVEMPGARVPIRMWADPATVEDGALRQLRNVATLPWIKGLAVMPDVHYGKGATVGSVI
AMRGAVCPAAVGVDIGCGMSAVKTSLTAGDLPGDLSRLRSKIEQAIPVGRGMHDDPIEPG
GFHGLATSGWDEFWGRFDGVAEAVRFRQGRATRQMGTLGSGNHFVEVCTDTTGAVWLMLH
SGSRNIGKELAEHHIGVAQKLPHNQGLVDRDLAVFVADTPQMAAYRNDLFWAQEYARYNR
TLMMALLKDVIRKEFKKARPMFEPEISCHHNYVAQERYDGMDLLVTRKGAIRAGSGDLGI
IPGSMGTGSYIVKGLGNDSSFNSASHGAGRRMSRNAAKRRYTARDLEEQTRGVECRKDSG
VVDEIPGAYKSIDQVIDQQRDLVEVVAKLKQVVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgtggagatgccgggcgcgcgggtaccgatccggatgtgggccgaccccgcg
acggtcgaggacggcgccctgcgccagctccggaacgtcgcgacgctgccgtggatcaag
ggcctcgccgtgatgccggacgtgcactacggcaagggcgccacggtcggctcggtgatc
gcgatgcgcggcgcggtgtgcccggccgcggtcggcgtggacatcggctgcgggatgtcc
gcggtgaagacctcgctgaccgccggcgacctgccgggcgacctgtcccggctgcgctcg
aagatcgagcaggcgatcccggtgggccgcggcatgcatgacgacccgatcgagccgggc
ggcttccacggcctggcgaccagcggctgggacgagttctgggggcggttcgacggggtc
gccgaggcggttcgcttccgccaggggcgggccacccggcagatgggcacgctcggcagc
ggcaaccacttcgtggaagtctgcaccgacaccaccggcgcggtctggctgatgctgcac
tccggctcccgcaacatcggcaaggagctggccgagcaccacatcggcgtggcccagaag
ctcccgcacaaccagggcctggtcgaccgcgacctcgccgtgttcgtcgcggacaccccg
cagatggcggcgtaccgcaacgacctgttctgggcgcaggagtacgccaggtacaaccgc
accctgatgatggcgctcctgaaggacgtgatccgcaaggagttcaagaaggccaggccg
atgttcgagccggagatctcctgccaccacaactacgtggcccaggagcggtacgacggg
atggacctgctggtcacccgcaagggcgcgatccgggccggttccggtgacctcggcatc
atcccgggctccatgggcacgggctcgtacatcgtcaagggcctgggcaacgacagctca
ttcaactccgcctcgcacggcgcgggccgccgtatgagccgcaacgcggccaagcggcgc
tacaccgccagggacctggaggagcagacacggggcgtggagtgccgcaaggactccggt
gtcgtggacgagatcccgggcgcctacaagtccatcgaccaggtcatcgaccagcagcgg
gacctggtggaggtcgtcgcgaagctcaagcaggtcgtctgcgtgaagggctga
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