Streptomyces sp. WP-1: QHG49_16150
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Entry
QHG49_16150 CDS
T10379
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
strw Streptomyces sp. WP-1
Brite
KEGG Orthology (KO) [BR:
strw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strw03032
]
QHG49_16150 (topA)
03400 DNA repair and recombination proteins [BR:
strw03400
]
QHG49_16150 (topA)
Enzymes [BR:
strw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QHG49_16150 (topA)
DNA replication proteins [BR:
strw03032
]
Prokaryotic type
DNA Topoisomerases
QHG49_16150 (topA)
DNA repair and recombination proteins [BR:
strw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QHG49_16150 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WKE70461
LinkDB
All DBs
Position
complement(3722329..3725163)
Genome browser
AA seq
944 aa
AA seq
DB search
MSPTSETAQGGRRLVIVESPAKAKTIKGYLGPGYVVEASVGHIRDLPNGAAEVPEKYTGE
VRRLGVDVEHDFQPVYVVNADKKAQVKKLKDLLKDSDELFLATDEDREGEAIAWHLQEVL
KPKIPVKRMVFHEITKDAIREAVANPRQLNQKLVDAQETRRILDRLYGYEVSPVLWKKVM
PRLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGTFGTGRAGDSSDPSSLVARLQTVD
GRRVAQGRDFDSVGRLKTANTLHLDEPTARALAAALENTRFAVRSVESKPYRRSPYAPFR
TTTLQQEASRKLGFGAKATMQIAQKLYENGYITYMRTDSTTLSETAIAAARAQVTQLYGA
DYLPPQPRTYAVKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFKLYELIWKRTVASQMK
DATGNSVTVKIGGTAADGRDVEFSASGKTITFHGFLKAYVEGADDPNAELDDRERRLPQV
TEGDPLSAEEITVDGHATKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVFKK
GTALVPSFLSFAVVNLLEKHFGRLVDYDFTAKMEDDLDRIARGEAQAVPWLKRFYFGEGT
ISGAAADAGNGDGDHLGGLKELVTDLGAIDAREVSSFPVGNGIVLRVGRYGPYIERGEKD
TEEHQRADIPDDLAPDELTIELAEKLLAEPSGDVELGTDPASGHQIVAKKGRYGPYVTEV
LPEGTPKTGKNAVKPRTASLFKSMALDTVTLDDALKLMSLPRVVGTDAEGQEITAQNGRY
GPYLKKGTDSRSLQAEDQIFTITLEEALAIYAQPKQRGRAAAKPPLKELGEDPVSKKPVV
VKDGRFGPYVTDGETNATLRSGDSVEEITPERGFELLAEKRAKGPAKKTAKKAPAKKTAP
AKKTAAKKTAAKKTTASAAKKTTAKKTTAKKATATKSTASGSEE
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgagaccgcacagggcggccgccgactcgtcatcgtcgagtcgcct
gccaaggcgaagacgatcaagggctacctcggccccggctacgtagtcgaagcgagcgtc
gggcacatccgtgacctccccaacggcgccgccgaggtgcccgagaagtacaccggcgag
gtgcgccgcctcggcgtggacgtcgagcacgacttccagcccgtctacgtggtcaacgcg
gacaagaaggcacaggtcaagaagctcaaggacctgctgaaggactccgacgaactcttc
ctggccaccgatgaggaccgcgagggcgaggccatcgcctggcacctccaggaggtcctc
aagccgaagatccccgtcaagcggatggtcttccacgagatcaccaaggacgcgatccgc
gaggccgtcgccaacccgcgccagctcaaccagaagctggtcgacgcccaggagacccgc
cgcatcctcgaccgcctctacggctacgaggtctccccggtgctgtggaagaaggtcatg
ccccggctgtcggccggccgtgtccagtccgtcgccacccggctcgtcgtcgagcgggaa
cgcgagcgcatcgccttccgctccgccgagtactgggacctcaccggcaccttcggcacc
ggccgcgcgggcgactcctccgacccgtcgtcgctggtcgcgcgcctgcagaccgtcgac
ggacggcgggtcgcgcagggccgcgacttcgactccgtgggccggctgaagaccgcgaac
accctccacctggacgagccgaccgcccgcgcgctggccgccgccctggagaacacccgc
ttcgccgtgcgctcggtggagtcgaagccgtaccgccgctcgccgtacgcgccgttccgt
acgacgacgctccagcaggaggccagccgcaagctcggcttcggcgccaaggcgaccatg
cagatcgcccagaagctgtacgagaacggctacatcacgtacatgcgtacggactccacg
acgctgagcgagaccgccatcgcggccgcccgcgcccaggtcacgcagctgtacggcgcc
gactacctgcccccgcagccgcgtacgtacgcggtgaaggtgaagaacgcgcaggaggcg
cacgaggcgatccgtccctcgggtgatcgtttccgcacccccgcggagaccggcctgacc
ggtgaccagttcaagctgtacgagctgatctggaagcggaccgtcgcctcccagatgaag
gacgcgaccggcaacagcgtgaccgtgaagatcggtggcaccgccgccgacggccgggac
gtggagttcagcgcctccggcaagacgatcaccttccacggtttcctcaaggcgtacgtc
gagggcgccgacgacccgaacgccgagctggacgaccgcgagcgccggctgccgcaggtc
accgagggcgacccgctgtccgccgaggagatcacggtcgacggccacgccaccaagccc
ccggcccgctacaccgaggcctccctggtcaaggagctggaagagcgcgagatcggccgc
ccgtcgacctatgcgtcgatcatcggcacgatcctcgaccgcggctatgtcttcaagaag
ggcacggcactcgtgccgtccttcctgtccttcgccgtcgtaaaccttctggagaagcac
ttcggccggctggtcgactacgacttcaccgccaagatggaggacgacctcgaccgcatc
gcccgcggcgaggcccaggccgtgccgtggctgaagcgcttctacttcggcgagggcacc
atcagcggtgccgccgccgacgcgggcaacggcgacggggaccacctcggcggcctcaag
gaactcgtcaccgacctgggcgcgatcgacgcccgcgaggtgtcctccttcccggtgggc
aacggcatcgtgctgcgggtcggccgctacgggccgtacatcgagcgcggcgagaaggac
accgaggagcaccagcgcgccgacatccccgacgacctggcgccggacgagctgaccatc
gagctggccgagaagctgctggccgagcccagcggcgatgtcgagctgggcaccgacccg
gccagcggccaccagatcgtcgccaagaagggccgctacgggccgtacgtcaccgaggtc
ctgcccgagggcaccccgaagaccggcaagaacgcggtcaagccgcgcaccgcctccctc
ttcaagtccatggcgctggacacggtgacgctggacgacgcgctgaagctgatgtccctg
ccgcgtgtcgtcggcaccgacgccgagggccaggagatcaccgcccagaacggccgctac
gggccgtatctgaagaagggcacggactcgcgctcgctccaggccgaggaccagatcttc
accatcacgctggaagaggccctggcgatctacgcccagccgaagcagcgcgggcgggcc
gccgccaagccgccgctgaaggaactgggcgaggacccggtctccaagaagccggtcgtg
gtcaaggacggccgcttcgggccgtacgtcaccgacggcgagaccaacgcgaccctgcgc
tccggcgacagcgtcgaggagatcaccccggagcgcggcttcgaacttcttgccgagaag
cgcgcgaagggcccggccaagaagaccgccaagaaggcgccggcgaagaagaccgccccg
gcgaagaagaccgccgccaagaagacggcggccaagaagacgacggcgagcgccgcgaag
aagacgacggcgaagaagaccaccgccaagaaggcgacggccaccaagtcgacggcttcc
ggttcggaggagtag
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